BioGRID Database Statistics

This page shows the latest snapshot of statistics for the BioGRID database. All previous snapshots are archived below separated by year.

  • Raw Interactions - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice.
  • Non-Redundant Interactions - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication.

Current Build Statistics (3.5.177) - October 2019

Physical and Genetic Interaction Statistics

Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications
Anopheles gambiae (PEST) PHYSICAL 2 1 2 2
GENETIC 0 0 0 0
COMBINED 2 1 2 2
Apis mellifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Arabidopsis thaliana (Columbia) PHYSICAL 55,621 48,577 10,418 2,299
GENETIC 350 282 304 154
COMBINED 55,971 48,772 10,468 2,379
Bacillus subtilis (168) PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Bos taurus PHYSICAL 481 433 457 193
GENETIC 0 0 0 0
COMBINED 481 433 457 193
Caenorhabditis elegans PHYSICAL 22,232 21,583 5,980 202
GENETIC 2,338 2,271 1,133 35
COMBINED 24,570 23,813 6,404 220
Candida albicans (SC5314) PHYSICAL 1,450 1,226 876 166
GENETIC 527 450 369 35
COMBINED 1,977 1,652 1,139 180
Canis familiaris PHYSICAL 138 126 144 26
GENETIC 0 0 0 0
COMBINED 138 126 144 26
Cavia porcellus PHYSICAL 7 5 9 5
GENETIC 0 0 0 0
COMBINED 7 5 9 5
Chlamydomonas reinhardtii PHYSICAL 17 16 19 4
GENETIC 0 0 0 0
COMBINED 17 16 19 4
Chlorocebus sabaeus PHYSICAL 17 15 18 6
GENETIC 0 0 0 0
COMBINED 17 15 18 6
Cricetulus griseus PHYSICAL 58 57 69 12
GENETIC 0 0 0 0
COMBINED 58 57 69 12
Danio rerio PHYSICAL 248 210 207 42
GENETIC 71 65 66 31
COMBINED 319 272 263 71
Dictyostelium discoideum (AX4) PHYSICAL 32 19 23 8
GENETIC 6 6 8 2
COMBINED 38 22 27 9
Drosophila melanogaster PHYSICAL 62,209 52,404 9,003 3,686
GENETIC 14,475 10,140 3,146 4,394
COMBINED 76,684 61,191 9,340 7,154
Emericella nidulans (FGSC A4) PHYSICAL 65 57 57 3
GENETIC 6 5 7 3
COMBINED 71 62 64 6
Equus caballus PHYSICAL 2 2 4 2
GENETIC 0 0 0 0
COMBINED 2 2 4 2
Escherichia coli (K12) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Escherichia coli (K12/MC4100/BW2952) PHYSICAL 9 9 10 2
GENETIC 0 0 0 0
COMBINED 9 9 10 2
Escherichia coli (K12/MG1655) PHYSICAL 2,301 2,119 1,305 28
GENETIC 26 25 36 12
COMBINED 2,327 2,143 1,336 40
Escherichia coli (K12/W3110) PHYSICAL 12,804 12,801 2,045 3
GENETIC 171,219 169,594 3,973 4
COMBINED 184,023 181,621 4,063 7
Gallus gallus PHYSICAL 510 433 408 95
GENETIC 13 10 15 10
COMBINED 523 442 416 104
Glycine max PHYSICAL 46 40 45 8
GENETIC 0 0 0 0
COMBINED 46 40 45 8
Hepatitus C Virus PHYSICAL 207 135 137 37
GENETIC 0 0 0 0
COMBINED 207 135 137 37
Homo sapiens PHYSICAL 523,461 389,300 24,024 30,257
GENETIC 7,808 7,716 2,678 335
COMBINED 531,269 396,364 24,373 30,390
Human Herpesvirus 1 PHYSICAL 265 204 173 48
GENETIC 6 6 7 1
COMBINED 271 209 178 48
Human Herpesvirus 2 PHYSICAL 12 6 10 5
GENETIC 0 0 0 0
COMBINED 12 6 10 5
Human Herpesvirus 3 PHYSICAL 5 3 6 3
GENETIC 0 0 0 0
COMBINED 5 3 6 3
Human Herpesvirus 4 PHYSICAL 429 326 323 47
GENETIC 0 0 0 0
COMBINED 429 326 323 47
Human Herpesvirus 5 PHYSICAL 149 108 121 28
GENETIC 0 0 0 0
COMBINED 149 108 121 28
Human Herpesvirus 6A PHYSICAL 11 8 12 7
GENETIC 0 0 0 0
COMBINED 11 8 12 7
Human Herpesvirus 6B PHYSICAL 4 4 7 3
GENETIC 0 0 0 0
COMBINED 4 4 7 3
Human Herpesvirus 7 PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human Herpesvirus 8 PHYSICAL 779 693 716 42
GENETIC 0 0 0 0
COMBINED 779 693 716 42
Human Immunodeficiency Virus 1 PHYSICAL 2,041 1,330 1,141 355
GENETIC 1 1 2 1
COMBINED 2,042 1,330 1,141 356
Human Immunodeficiency Virus 2 PHYSICAL 23 15 19 12
GENETIC 0 0 0 0
COMBINED 23 15 19 12
Human papillomavirus (10) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human papillomavirus (16) PHYSICAL 263 188 175 28
GENETIC 0 0 0 0
COMBINED 263 188 175 28
Human papillomavirus (6b) PHYSICAL 20 20 22 2
GENETIC 0 0 0 0
COMBINED 20 20 22 2
Leishmania major (Friedlin) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Macaca mulatta PHYSICAL 23 14 17 14
GENETIC 0 0 0 0
COMBINED 23 14 17 14
Meleagris gallopavo PHYSICAL 2 2 2 1
GENETIC 0 0 0 0
COMBINED 2 2 2 1
Mus musculus PHYSICAL 47,951 41,532 13,451 4,008
GENETIC 382 337 341 194
COMBINED 48,333 41,794 13,511 4,145
Mycobacterium tuberculosis (H37Rv) PHYSICAL 12 10 13 3
GENETIC 0 0 0 0
COMBINED 12 10 13 3
Neurospora crassa (OR74A) PHYSICAL 11 10 12 2
GENETIC 0 0 0 0
COMBINED 11 10 12 2
Nicotiana tomentosiformis PHYSICAL 3 2 2 1
GENETIC 0 0 0 0
COMBINED 3 2 2 1
Oryctolagus cuniculus PHYSICAL 318 284 293 66
GENETIC 0 0 0 0
COMBINED 318 284 293 66
Oryza sativa (Japonica) PHYSICAL 343 327 310 20
GENETIC 2 2 3 1
COMBINED 345 329 310 20
Ovis aries PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Pan troglodytes PHYSICAL 6 5 10 5
GENETIC 0 0 0 0
COMBINED 6 5 10 5
Pediculus humanus PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Plasmodium falciparum (3D7) PHYSICAL 2,545 2,508 1,227 5
GENETIC 0 0 0 0
COMBINED 2,545 2,508 1,227 5
Rattus norvegicus PHYSICAL 7,829 6,653 4,173 1,165
GENETIC 19 19 31 12
COMBINED 7,848 6,663 4,183 1,168
Ricinus communis PHYSICAL 5 2 3 2
GENETIC 0 0 0 0
COMBINED 5 2 3 2
Saccharomyces cerevisiae (S288c) PHYSICAL 173,640 115,729 6,917 9,520
GENETIC 577,610 441,949 5,960 9,244
COMBINED 751,250 544,097 7,172 15,761
Schizosaccharomyces pombe (972h) PHYSICAL 17,054 12,843 3,558 1,555
GENETIC 61,517 51,879 3,556 1,912
COMBINED 78,571 63,640 4,620 2,742
Selaginella moellendorffii PHYSICAL 8 6 5 1
GENETIC 2 2 3 1
COMBINED 10 8 6 1
Simian Immunodeficiency Virus PHYSICAL 34 16 19 16
GENETIC 0 0 0 0
COMBINED 34 16 19 16
Simian Virus 40 PHYSICAL 11 5 6 7
GENETIC 0 0 0 0
COMBINED 11 5 6 7
Solanum lycopersicum PHYSICAL 137 107 44 8
GENETIC 4 4 4 1
COMBINED 141 109 45 8
Solanum tuberosum PHYSICAL 3 3 5 3
GENETIC 0 0 0 0
COMBINED 3 3 5 3
Strongylocentrotus purpuratus PHYSICAL 17 16 17 3
GENETIC 0 0 0 0
COMBINED 17 16 17 3
Sus scrofa PHYSICAL 84 80 96 29
GENETIC 0 0 0 0
COMBINED 84 80 96 29
Tobacco Mosaic Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Ustilago maydis (521) PHYSICAL 3 3 3 3
GENETIC 1 1 2 1
COMBINED 4 4 4 4
Vaccinia Virus PHYSICAL 7 6 8 3
GENETIC 0 0 0 0
COMBINED 7 6 8 3
Vitis vinifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Xenopus laevis PHYSICAL 1,408 1,246 1,141 229
GENETIC 7 7 10 3
COMBINED 1,415 1,253 1,151 232
Zea mays PHYSICAL 18 13 21 9
GENETIC 0 0 0 0
COMBINED 18 13 21 9
All Organisms PHYSICAL 904,306 683,985 71,614 49,464
GENETIC 835,837 684,244 21,032 16,191
COMBINED 1,740,143 1,350,574 76,129 60,595

Chemical Interaction Statistics

Organism Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications Unique Chemicals
Bacillus subtilis (168) 164 85 49 15 79
Caenorhabditis elegans 8 4 4 2 1
Candida albicans (SC5314) 108 25 7 50 24
Escherichia coli (K12) 5 2 2 3 2
Escherichia coli (K12/MG1655) 1,590 834 287 137 583
Homo sapiens 25,841 10,854 2,183 8,944 4,593
Human Herpesvirus 1 65 24 3 24 21
Human Herpesvirus 4 10 3 3 6 3
Human Immunodeficiency Virus 1 105 53 2 48 53
Leishmania major (Friedlin) 8 4 1 2 4
Mus musculus 2 1 1 2 1
Mycobacterium tuberculosis (CDC1551) 3 3 3 1 3
Mycobacterium tuberculosis (H37Rv) 1 1 1 1 1
Mycoplasma pneumoniae (M129) 2 1 1 2 1
Plasmodium falciparum (3D7) 4 1 1 4 1
Rattus norvegicus 2 2 1 2 2
Saccharomyces cerevisiae (S288c) 7 7 2 2 7
Streptococcus pneumoniae (ATCCBAA255) 82 72 8 11 29
Streptococcus pneumoniae (ATCCBAA334) 61 26 10 18 19
Synechococcus elongatus (PCC6301) 4 2 1 2 2
Vaccinia Virus 21 11 2 3 11
All Organisms 28,093 12,015 2,572 9,219 5,173

Post Translational Modification (PTM) Statistics

Organism PTM Raw Sites NR Sites Un-assigned Sites Unique Proteins Unique Genes Unique Publications
Arabidopsis thaliana (Columbia) SUMOYLATION 0 0 2 0 2 1
UBIQUITINATION 0 0 8 0 8 8
COMBINED 0 0 10 0 10 9
Bos taurus SUMOYLATION 0 0 2 0 2 2
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 3 0 3 3
Caenorhabditis elegans SUMOYLATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Chlorocebus sabaeus UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Cricetulus griseus UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Danio rerio SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 4 0 4 3
COMBINED 0 0 5 0 5 4
Drosophila melanogaster NEDDYLATION 0 0 2 0 2 1
SUMOYLATION 0 0 2 0 2 2
UBIQUITINATION 0 0 7 0 7 4
COMBINED 0 0 11 0 9 6
Gallus gallus SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 2 0 1 1
Hepatitus C Virus UBIQUITINATION 0 0 2 0 1 2
COMBINED 0 0 2 0 1 2
Homo sapiens ATG12-ATG5 CONJUGATE 0 0 2 0 1 2
FAT10YLATION 0 0 696 0 659 5
ISGYLATION 0 0 28 0 28 7
NEDDYLATION 0 0 1,093 0 903 75
SUMOYLATION 0 0 4,392 0 2,317 330
UBIQUITINATION 705,673 383,699 39,038 54,962 11,895 3,118
COMBINED 705,673 383,699 45,249 54,962 12,022 3,408
Human Herpesvirus 1 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 4 0 3 4
COMBINED 0 0 5 0 3 5
Human Herpesvirus 4 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 2 0 1 1
Human Herpesvirus 6A SUMOYLATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Human Herpesvirus 8 UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Human Immunodeficiency Virus 1 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 18 0 6 18
COMBINED 0 0 19 0 6 18
Macaca mulatta UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Mus musculus ATG12-ATG5 CONJUGATE 0 0 1 0 1 1
ISGYLATION 0 0 43 0 42 2
NEDDYLATION 0 0 7 0 6 5
SUMOYLATION 0 0 49 0 41 39
UBIQUITINATION 34,482 34,482 737 13,810 3,872 444
UFMYLATION 0 0 10 0 10 1
COMBINED 34,482 34,482 847 13,810 3,901 484
Rattus norvegicus NEDDYLATION 0 0 1 0 1 1
SUMOYLATION 0 0 6 0 6 6
UBIQUITINATION 0 0 38 0 35 35
COMBINED 0 0 45 0 40 40
Saccharomyces cerevisiae (S288c) NEDDYLATION 0 0 10 0 4 9
PHOSPHORYLATION 42,907 19,981 0 3,165 3,165 528
SUMOYLATION 0 0 1,438 0 818 67
UBIQUITINATION 34,338 20,019 9,736 2,549 3,678 215
COMBINED 77,245 40,000 11,184 3,918 4,499 802
Schizosaccharomyces pombe (972h) UBIQUITINATION 0 0 4 0 4 3
COMBINED 0 0 4 0 4 3
Xenopus laevis UBIQUITINATION 0 0 2 0 2 2
COMBINED 0 0 2 0 2 2
All Organisms ATG12-ATG5 CONJUGATE 0 0 3 0 2 3
FAT10YLATION 0 0 696 0 659 5
ISGYLATION 0 0 71 0 70 8
NEDDYLATION 0 0 1,113 0 916 84
PHOSPHORYLATION 42,907 19,981 0 3,165 3,165 528
SUMOYLATION 0 0 5,898 0 3,195 433
UBIQUITINATION 774,493 438,200 49,605 71,321 19,522 3,741
UFMYLATION 0 0 10 0 10 1
COMBINED 817,400 458,181 57,396 72,690 20,513 4,643

Note: Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions.

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statistics.txt · Last modified: 2019/10/01 01:43 by biogridadmin