BioGRID Database Statistics

This page shows the latest snapshot of statistics for the BioGRID database. All previous snapshots are archived below separated by year.

  • Raw Interactions - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice.
  • Non-Redundant Interactions - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication.

Current Build Statistics (3.5.180) - January 2020

Physical and Genetic Interaction Statistics

Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications
Anopheles gambiae (PEST) PHYSICAL 2 1 2 2
GENETIC 0 0 0 0
COMBINED 2 1 2 2
Apis mellifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Arabidopsis thaliana (Columbia) PHYSICAL 55,848 48,786 10,500 2,304
GENETIC 350 282 304 154
COMBINED 56,198 48,981 10,550 2,384
Bacillus subtilis (168) PHYSICAL 18 11 9 4
GENETIC 0 0 0 0
COMBINED 18 11 9 4
Bos taurus PHYSICAL 484 436 462 195
GENETIC 0 0 0 0
COMBINED 484 436 462 195
Caenorhabditis elegans PHYSICAL 24,514 23,476 6,563 206
GENETIC 2,338 2,271 1,133 35
COMBINED 26,852 25,704 6,942 224
Candida albicans (SC5314) PHYSICAL 1,548 1,321 940 168
GENETIC 527 450 369 35
COMBINED 2,075 1,747 1,199 182
Canis familiaris PHYSICAL 138 126 144 26
GENETIC 0 0 0 0
COMBINED 138 126 144 26
Cavia porcellus PHYSICAL 8 6 11 6
GENETIC 0 0 0 0
COMBINED 8 6 11 6
Chlamydomonas reinhardtii PHYSICAL 17 16 19 4
GENETIC 0 0 0 0
COMBINED 17 16 19 4
Chlorocebus sabaeus PHYSICAL 17 15 18 6
GENETIC 0 0 0 0
COMBINED 17 15 18 6
Cricetulus griseus PHYSICAL 59 58 71 13
GENETIC 0 0 0 0
COMBINED 59 58 71 13
Danio rerio PHYSICAL 248 210 207 42
GENETIC 71 65 66 31
COMBINED 319 272 263 71
Dictyostelium discoideum (AX4) PHYSICAL 33 20 25 9
GENETIC 6 6 8 2
COMBINED 39 23 29 10
Drosophila melanogaster PHYSICAL 62,215 52,407 9,007 3,690
GENETIC 14,476 10,141 3,147 4,395
COMBINED 76,691 61,195 9,345 7,159
Emericella nidulans (FGSC A4) PHYSICAL 65 57 57 3
GENETIC 6 5 7 3
COMBINED 71 62 64 6
Equus caballus PHYSICAL 2 2 4 2
GENETIC 0 0 0 0
COMBINED 2 2 4 2
Escherichia coli (K12) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Escherichia coli (K12/MC4100/BW2952) PHYSICAL 9 9 10 2
GENETIC 0 0 0 0
COMBINED 9 9 10 2
Escherichia coli (K12/MG1655) PHYSICAL 2,304 2,122 1,308 29
GENETIC 26 25 36 12
COMBINED 2,330 2,146 1,339 41
Escherichia coli (K12/W3110) PHYSICAL 12,804 12,801 2,045 3
GENETIC 171,219 169,594 3,973 4
COMBINED 184,023 181,621 4,063 7
Gallus gallus PHYSICAL 514 437 413 98
GENETIC 13 10 15 10
COMBINED 527 446 421 107
Glycine max PHYSICAL 46 40 45 8
GENETIC 0 0 0 0
COMBINED 46 40 45 8
Hepatitus C Virus PHYSICAL 253 176 178 40
GENETIC 0 0 0 0
COMBINED 253 176 178 40
Homo sapiens PHYSICAL 540,552 403,648 24,221 30,737
GENETIC 8,981 8,857 3,620 343
COMBINED 549,533 411,816 24,640 30,875
Human Herpesvirus 1 PHYSICAL 267 206 174 49
GENETIC 6 6 7 1
COMBINED 273 211 179 49
Human Herpesvirus 2 PHYSICAL 12 6 10 5
GENETIC 0 0 0 0
COMBINED 12 6 10 5
Human Herpesvirus 3 PHYSICAL 5 3 6 3
GENETIC 0 0 0 0
COMBINED 5 3 6 3
Human Herpesvirus 4 PHYSICAL 429 326 323 47
GENETIC 0 0 0 0
COMBINED 429 326 323 47
Human Herpesvirus 5 PHYSICAL 149 108 121 28
GENETIC 0 0 0 0
COMBINED 149 108 121 28
Human Herpesvirus 6A PHYSICAL 11 8 12 7
GENETIC 0 0 0 0
COMBINED 11 8 12 7
Human Herpesvirus 6B PHYSICAL 4 4 7 3
GENETIC 0 0 0 0
COMBINED 4 4 7 3
Human Herpesvirus 7 PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human Herpesvirus 8 PHYSICAL 779 693 716 42
GENETIC 0 0 0 0
COMBINED 779 693 716 42
Human Immunodeficiency Virus 1 PHYSICAL 2,046 1,334 1,142 357
GENETIC 1 1 2 1
COMBINED 2,047 1,334 1,142 358
Human Immunodeficiency Virus 2 PHYSICAL 89 80 63 13
GENETIC 0 0 0 0
COMBINED 89 80 63 13
Human papillomavirus (10) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human papillomavirus (16) PHYSICAL 263 188 175 28
GENETIC 0 0 0 0
COMBINED 263 188 175 28
Human papillomavirus (6b) PHYSICAL 20 20 22 2
GENETIC 0 0 0 0
COMBINED 20 20 22 2
Leishmania major (Friedlin) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Macaca mulatta PHYSICAL 23 14 17 14
GENETIC 0 0 0 0
COMBINED 23 14 17 14
Meleagris gallopavo PHYSICAL 2 2 2 1
GENETIC 0 0 0 0
COMBINED 2 2 2 1
Mus musculus PHYSICAL 49,711 43,074 13,611 4,063
GENETIC 385 340 344 196
COMBINED 50,096 43,339 13,669 4,201
Mycobacterium tuberculosis (H37Rv) PHYSICAL 15 12 15 5
GENETIC 0 0 0 0
COMBINED 15 12 15 5
Neurospora crassa (OR74A) PHYSICAL 11 10 12 2
GENETIC 0 0 0 0
COMBINED 11 10 12 2
Nicotiana tomentosiformis PHYSICAL 3 2 2 1
GENETIC 0 0 0 0
COMBINED 3 2 2 1
Oryctolagus cuniculus PHYSICAL 318 284 293 66
GENETIC 0 0 0 0
COMBINED 318 284 293 66
Oryza sativa (Japonica) PHYSICAL 346 330 314 21
GENETIC 2 2 3 1
COMBINED 348 332 314 21
Ovis aries PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Pan troglodytes PHYSICAL 6 5 10 5
GENETIC 0 0 0 0
COMBINED 6 5 10 5
Pediculus humanus PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Plasmodium falciparum (3D7) PHYSICAL 2,545 2,508 1,227 5
GENETIC 0 0 0 0
COMBINED 2,545 2,508 1,227 5
Rattus norvegicus PHYSICAL 7,917 6,736 4,197 1,178
GENETIC 19 19 31 12
COMBINED 7,936 6,746 4,207 1,181
Ricinus communis PHYSICAL 5 2 3 2
GENETIC 0 0 0 0
COMBINED 5 2 3 2
Saccharomyces cerevisiae (S288c) PHYSICAL 174,169 116,144 7,072 9,550
GENETIC 577,782 442,060 5,960 9,259
COMBINED 751,951 544,619 7,326 15,799
Schizosaccharomyces pombe (972h) PHYSICAL 17,226 12,913 3,566 1,601
GENETIC 61,734 52,014 3,565 1,959
COMBINED 78,960 63,807 4,627 2,818
Selaginella moellendorffii PHYSICAL 8 6 5 1
GENETIC 2 2 3 1
COMBINED 10 8 6 1
Simian Immunodeficiency Virus PHYSICAL 34 16 19 16
GENETIC 0 0 0 0
COMBINED 34 16 19 16
Simian Virus 40 PHYSICAL 11 5 6 7
GENETIC 0 0 0 0
COMBINED 11 5 6 7
Solanum lycopersicum PHYSICAL 137 107 44 8
GENETIC 4 4 4 1
COMBINED 141 109 45 8
Solanum tuberosum PHYSICAL 3 3 5 3
GENETIC 0 0 0 0
COMBINED 3 3 5 3
Streptococcus pneumoniae (ATCCBAA255) PHYSICAL 16 9 6 1
GENETIC 0 0 0 0
COMBINED 16 9 6 1
Strongylocentrotus purpuratus PHYSICAL 17 16 17 3
GENETIC 0 0 0 0
COMBINED 17 16 17 3
Sus scrofa PHYSICAL 90 84 102 32
GENETIC 0 0 0 0
COMBINED 90 84 102 32
Tobacco Mosaic Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Ustilago maydis (521) PHYSICAL 3 3 3 3
GENETIC 1 1 2 1
COMBINED 4 4 4 4
Vaccinia Virus PHYSICAL 7 6 8 3
GENETIC 0 0 0 0
COMBINED 7 6 8 3
Vitis vinifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Xenopus laevis PHYSICAL 1,412 1,248 1,144 231
GENETIC 7 7 10 3
COMBINED 1,419 1,255 1,154 234
Zea mays PHYSICAL 18 13 21 9
GENETIC 0 0 0 0
COMBINED 18 13 21 9
All Organisms PHYSICAL 925,793 701,957 72,555 50,048
GENETIC 837,401 685,634 21,985 16,263
COMBINED 1,763,194 1,369,855 77,087 61,223

Chemical Interaction Statistics

Organism Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications Unique Chemicals
Bacillus subtilis (168) 164 85 49 15 79
Caenorhabditis elegans 8 4 4 2 1
Candida albicans (SC5314) 108 25 7 50 24
Escherichia coli (K12) 5 2 2 3 2
Escherichia coli (K12/MG1655) 1,590 834 287 137 583
Homo sapiens 25,841 10,854 2,183 8,944 4,593
Human Herpesvirus 1 65 24 3 24 21
Human Herpesvirus 4 10 3 3 6 3
Human Immunodeficiency Virus 1 105 53 2 48 53
Leishmania major (Friedlin) 8 4 1 2 4
Mus musculus 2 1 1 2 1
Mycobacterium tuberculosis (CDC1551) 3 3 3 1 3
Mycobacterium tuberculosis (H37Rv) 1 1 1 1 1
Mycoplasma pneumoniae (M129) 2 1 1 2 1
Plasmodium falciparum (3D7) 4 1 1 4 1
Rattus norvegicus 2 2 1 2 2
Saccharomyces cerevisiae (S288c) 7 7 2 2 7
Streptococcus pneumoniae (ATCCBAA255) 82 72 8 11 29
Streptococcus pneumoniae (ATCCBAA334) 61 26 10 18 19
Synechococcus elongatus (PCC6301) 4 2 1 2 2
Vaccinia Virus 21 11 2 3 11
All Organisms 28,093 12,015 2,572 9,219 5,173

Post Translational Modification (PTM) Statistics

Organism PTM Raw Sites NR Sites Un-assigned Sites Unique Proteins Unique Genes Unique Publications
Arabidopsis thaliana (Columbia) SUMOYLATION 0 0 2 0 2 1
UBIQUITINATION 0 0 8 0 8 8
COMBINED 0 0 10 0 10 9
Bos taurus SUMOYLATION 0 0 2 0 2 2
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 3 0 3 3
Caenorhabditis elegans SUMOYLATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Chlorocebus sabaeus UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Cricetulus griseus UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Danio rerio SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 4 0 4 3
COMBINED 0 0 5 0 5 4
Drosophila melanogaster NEDDYLATION 0 0 2 0 2 1
SUMOYLATION 0 0 2 0 2 2
UBIQUITINATION 0 0 7 0 7 4
COMBINED 0 0 11 0 9 6
Gallus gallus SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 2 0 1 1
Hepatitus C Virus UBIQUITINATION 0 0 2 0 1 2
COMBINED 0 0 2 0 1 2
Homo sapiens ATG12-ATG5 CONJUGATE 0 0 2 0 1 2
FAT10YLATION 0 0 696 0 659 5
ISGYLATION 0 0 28 0 28 7
NEDDYLATION 0 0 1,093 0 903 75
SUMOYLATION 0 0 4,392 0 2,317 330
UBIQUITINATION 705,673 383,699 39,038 54,962 11,895 3,118
COMBINED 705,673 383,699 45,249 54,962 12,022 3,408
Human Herpesvirus 1 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 4 0 3 4
COMBINED 0 0 5 0 3 5
Human Herpesvirus 4 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 2 0 1 1
Human Herpesvirus 6A SUMOYLATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Human Herpesvirus 8 UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Human Immunodeficiency Virus 1 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 18 0 6 18
COMBINED 0 0 19 0 6 18
Macaca mulatta UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Mus musculus ATG12-ATG5 CONJUGATE 0 0 1 0 1 1
ISGYLATION 0 0 43 0 42 2
NEDDYLATION 0 0 7 0 6 5
SUMOYLATION 0 0 49 0 41 39
UBIQUITINATION 34,482 34,482 737 13,810 3,872 444
UFMYLATION 0 0 10 0 10 1
COMBINED 34,482 34,482 847 13,810 3,901 484
Rattus norvegicus NEDDYLATION 0 0 1 0 1 1
SUMOYLATION 0 0 6 0 6 6
UBIQUITINATION 0 0 38 0 35 35
COMBINED 0 0 45 0 40 40
Saccharomyces cerevisiae (S288c) NEDDYLATION 0 0 10 0 4 9
PHOSPHORYLATION 42,907 19,981 0 3,165 3,165 528
SUMOYLATION 0 0 1,438 0 818 67
UBIQUITINATION 34,338 20,019 9,736 2,549 3,678 215
COMBINED 77,245 40,000 11,184 3,918 4,499 802
Schizosaccharomyces pombe (972h) UBIQUITINATION 0 0 4 0 4 3
COMBINED 0 0 4 0 4 3
Xenopus laevis UBIQUITINATION 0 0 2 0 2 2
COMBINED 0 0 2 0 2 2
All Organisms ATG12-ATG5 CONJUGATE 0 0 3 0 2 3
FAT10YLATION 0 0 696 0 659 5
ISGYLATION 0 0 71 0 70 8
NEDDYLATION 0 0 1,113 0 916 84
PHOSPHORYLATION 42,907 19,981 0 3,165 3,165 528
SUMOYLATION 0 0 5,898 0 3,195 433
UBIQUITINATION 774,493 438,200 49,605 71,321 19,522 3,741
UFMYLATION 0 0 10 0 10 1
COMBINED 817,400 458,181 57,396 72,690 20,513 4,643

Note: Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions.

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statistics.txt · Last modified: 2020/01/01 03:13 by biogridadmin