BioGRID Database Statistics

This page shows the latest snapshot of statistics for the BioGRID database. All previous snapshots are archived below separated by year.

  • Raw Interactions - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice.
  • Non-Redundant Interactions - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication.

Current Build Statistics (3.5.174) - July 2019

Physical and Genetic Interaction Statistics

Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications
Anopheles gambiae (PEST) PHYSICAL 2 1 2 2
GENETIC 0 0 0 0
COMBINED 2 1 2 2
Apis mellifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Arabidopsis thaliana (Columbia) PHYSICAL 55,613 48,572 10,417 2,298
GENETIC 350 282 304 154
COMBINED 55,963 48,767 10,467 2,378
Bacillus subtilis (168) PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Bos taurus PHYSICAL 479 431 455 191
GENETIC 0 0 0 0
COMBINED 479 431 455 191
Caenorhabditis elegans PHYSICAL 6,364 5,811 3,282 198
GENETIC 2,338 2,271 1,133 35
COMBINED 8,702 8,057 3,955 216
Candida albicans (SC5314) PHYSICAL 1,080 876 705 152
GENETIC 521 444 363 32
COMBINED 1,601 1,304 975 166
Canis familiaris PHYSICAL 138 126 144 26
GENETIC 0 0 0 0
COMBINED 138 126 144 26
Cavia porcellus PHYSICAL 7 5 9 5
GENETIC 0 0 0 0
COMBINED 7 5 9 5
Chlamydomonas reinhardtii PHYSICAL 17 16 19 4
GENETIC 0 0 0 0
COMBINED 17 16 19 4
Chlorocebus sabaeus PHYSICAL 17 15 18 6
GENETIC 0 0 0 0
COMBINED 17 15 18 6
Cricetulus griseus PHYSICAL 55 55 65 10
GENETIC 0 0 0 0
COMBINED 55 55 65 10
Danio rerio PHYSICAL 248 210 207 42
GENETIC 71 65 66 31
COMBINED 319 272 263 71
Dictyostelium discoideum (AX4) PHYSICAL 32 19 23 8
GENETIC 6 6 8 2
COMBINED 38 22 27 9
Drosophila melanogaster PHYSICAL 62,204 52,402 9,002 3,684
GENETIC 14,475 10,140 3,146 4,394
COMBINED 76,679 61,190 9,339 7,153
Emericella nidulans (FGSC A4) PHYSICAL 65 57 57 3
GENETIC 6 5 7 3
COMBINED 71 62 64 6
Equus caballus PHYSICAL 2 2 4 2
GENETIC 0 0 0 0
COMBINED 2 2 4 2
Escherichia coli (K12) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Escherichia coli (K12/MC4100/BW2952) PHYSICAL 9 9 10 2
GENETIC 0 0 0 0
COMBINED 9 9 10 2
Escherichia coli (K12/MG1655) PHYSICAL 2,299 2,117 1,303 26
GENETIC 26 25 36 12
COMBINED 2,325 2,141 1,334 38
Escherichia coli (K12/W3110) PHYSICAL 12,804 12,801 2,045 3
GENETIC 171,219 169,594 3,973 4
COMBINED 184,023 181,621 4,063 7
Gallus gallus PHYSICAL 508 431 404 93
GENETIC 13 10 15 10
COMBINED 521 440 412 102
Glycine max PHYSICAL 46 40 45 8
GENETIC 0 0 0 0
COMBINED 46 40 45 8
Hepatitus C Virus PHYSICAL 200 133 135 35
GENETIC 0 0 0 0
COMBINED 200 133 135 35
Homo sapiens PHYSICAL 512,912 381,958 23,929 29,695
GENETIC 7,807 7,715 2,677 334
COMBINED 520,719 389,038 24,280 29,828
Human Herpesvirus 1 PHYSICAL 265 204 173 48
GENETIC 6 6 7 1
COMBINED 271 209 178 48
Human Herpesvirus 2 PHYSICAL 6 4 7 4
GENETIC 0 0 0 0
COMBINED 6 4 7 4
Human Herpesvirus 3 PHYSICAL 5 3 6 3
GENETIC 0 0 0 0
COMBINED 5 3 6 3
Human Herpesvirus 4 PHYSICAL 408 308 307 46
GENETIC 0 0 0 0
COMBINED 408 308 307 46
Human Herpesvirus 5 PHYSICAL 119 82 94 26
GENETIC 0 0 0 0
COMBINED 119 82 94 26
Human Herpesvirus 6A PHYSICAL 11 8 12 7
GENETIC 0 0 0 0
COMBINED 11 8 12 7
Human Herpesvirus 6B PHYSICAL 4 4 7 3
GENETIC 0 0 0 0
COMBINED 4 4 7 3
Human Herpesvirus 7 PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human Herpesvirus 8 PHYSICAL 777 692 715 41
GENETIC 0 0 0 0
COMBINED 777 692 715 41
Human Immunodeficiency Virus 1 PHYSICAL 2,026 1,325 1,137 352
GENETIC 1 1 2 1
COMBINED 2,027 1,325 1,137 353
Human Immunodeficiency Virus 2 PHYSICAL 23 15 19 12
GENETIC 0 0 0 0
COMBINED 23 15 19 12
Human papillomavirus (10) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human papillomavirus (16) PHYSICAL 253 185 172 24
GENETIC 0 0 0 0
COMBINED 253 185 172 24
Human papillomavirus (6b) PHYSICAL 20 20 22 2
GENETIC 0 0 0 0
COMBINED 20 20 22 2
Macaca mulatta PHYSICAL 22 13 15 13
GENETIC 0 0 0 0
COMBINED 22 13 15 13
Meleagris gallopavo PHYSICAL 2 2 2 1
GENETIC 0 0 0 0
COMBINED 2 2 2 1
Mus musculus PHYSICAL 47,053 40,702 13,306 3,968
GENETIC 382 337 341 194
COMBINED 47,435 40,964 13,366 4,105
Mycobacterium tuberculosis (H37Rv) PHYSICAL 12 10 13 3
GENETIC 0 0 0 0
COMBINED 12 10 13 3
Neurospora crassa (OR74A) PHYSICAL 11 10 12 2
GENETIC 0 0 0 0
COMBINED 11 10 12 2
Nicotiana tomentosiformis PHYSICAL 3 2 2 1
GENETIC 0 0 0 0
COMBINED 3 2 2 1
Oryctolagus cuniculus PHYSICAL 316 282 289 65
GENETIC 0 0 0 0
COMBINED 316 282 289 65
Oryza sativa (Japonica) PHYSICAL 343 327 310 20
GENETIC 2 2 3 1
COMBINED 345 329 310 20
Ovis aries PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Pan troglodytes PHYSICAL 6 5 10 5
GENETIC 0 0 0 0
COMBINED 6 5 10 5
Pediculus humanus PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Plasmodium falciparum (3D7) PHYSICAL 2,545 2,508 1,227 5
GENETIC 0 0 0 0
COMBINED 2,545 2,508 1,227 5
Rattus norvegicus PHYSICAL 7,779 6,628 4,159 1,158
GENETIC 19 19 31 12
COMBINED 7,798 6,638 4,169 1,161
Ricinus communis PHYSICAL 5 2 3 2
GENETIC 0 0 0 0
COMBINED 5 2 3 2
Saccharomyces cerevisiae (S288c) PHYSICAL 171,959 114,693 6,909 9,422
GENETIC 576,131 441,069 5,958 9,156
COMBINED 748,090 542,419 7,165 15,613
Schizosaccharomyces pombe (972h) PHYSICAL 15,294 11,210 3,279 1,520
GENETIC 60,572 51,034 3,479 1,871
COMBINED 75,866 61,263 4,469 2,681
Selaginella moellendorffii PHYSICAL 8 6 5 1
GENETIC 2 2 3 1
COMBINED 10 8 6 1
Simian Immunodeficiency Virus PHYSICAL 34 16 19 16
GENETIC 0 0 0 0
COMBINED 34 16 19 16
Simian Virus 40 PHYSICAL 11 5 6 7
GENETIC 0 0 0 0
COMBINED 11 5 6 7
Solanum lycopersicum PHYSICAL 137 107 44 8
GENETIC 4 4 4 1
COMBINED 141 109 45 8
Solanum tuberosum PHYSICAL 3 3 5 3
GENETIC 0 0 0 0
COMBINED 3 3 5 3
Strongylocentrotus purpuratus PHYSICAL 17 16 17 3
GENETIC 0 0 0 0
COMBINED 17 16 17 3
Sus scrofa PHYSICAL 84 80 96 29
GENETIC 0 0 0 0
COMBINED 84 80 96 29
Tobacco Mosaic Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Ustilago maydis (521) PHYSICAL 3 3 3 3
GENETIC 1 1 2 1
COMBINED 4 4 4 4
Vaccinia Virus PHYSICAL 7 6 8 3
GENETIC 0 0 0 0
COMBINED 7 6 8 3
Vitis vinifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Xenopus laevis PHYSICAL 1,384 1,228 1,128 226
GENETIC 7 7 10 3
COMBINED 1,391 1,235 1,138 229
Zea mays PHYSICAL 18 13 21 9
GENETIC 0 0 0 0
COMBINED 18 13 21 9
All Organisms PHYSICAL 873,288 657,116 68,258 48,746
GENETIC 833,406 682,512 20,946 16,059
COMBINED 1,706,694 1,322,353 73,159 59,803

Chemical Interaction Statistics

Organism Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications Unique Chemicals
Bacillus subtilis (168) 164 85 49 15 79
Caenorhabditis elegans 8 4 4 2 1
Candida albicans (SC5314) 108 25 7 50 24
Escherichia coli (K12) 5 2 2 3 2
Escherichia coli (K12/MG1655) 1,590 834 287 137 583
Homo sapiens 25,841 10,854 2,183 8,944 4,593
Human Herpesvirus 1 65 24 3 24 21
Human Herpesvirus 4 10 3 3 6 3
Human Immunodeficiency Virus 1 105 53 2 48 53
Leishmania major (Friedlin) 8 4 1 2 4
Mus musculus 2 1 1 2 1
Mycobacterium tuberculosis (CDC1551) 3 3 3 1 3
Mycobacterium tuberculosis (H37Rv) 1 1 1 1 1
Mycoplasma pneumoniae (M129) 2 1 1 2 1
Plasmodium falciparum (3D7) 4 1 1 4 1
Rattus norvegicus 2 2 1 2 2
Saccharomyces cerevisiae (S288c) 7 7 2 2 7
Streptococcus pneumoniae (ATCCBAA255) 82 72 8 11 29
Streptococcus pneumoniae (ATCCBAA334) 61 26 10 18 19
Synechococcus elongatus (PCC6301) 4 2 1 2 2
Vaccinia Virus 21 11 2 3 11
All Organisms 28,093 12,015 2,572 9,219 5,173

Post Translational Modification (PTM) Statistics

Organism PTM Raw Sites NR Sites Un-assigned Sites Unique Proteins Unique Genes Unique Publications
Arabidopsis thaliana (Columbia) SUMOYLATION 0 0 2 0 2 1
UBIQUITINATION 0 0 8 0 8 8
COMBINED 0 0 10 0 10 9
Bos taurus SUMOYLATION 0 0 2 0 2 2
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 3 0 3 3
Caenorhabditis elegans SUMOYLATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Chlorocebus sabaeus UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Cricetulus griseus UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Danio rerio SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 4 0 4 3
COMBINED 0 0 5 0 5 4
Drosophila melanogaster NEDDYLATION 0 0 2 0 2 1
SUMOYLATION 0 0 2 0 2 2
UBIQUITINATION 0 0 7 0 7 4
COMBINED 0 0 11 0 9 6
Gallus gallus SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 2 0 1 1
Hepatitus C Virus UBIQUITINATION 0 0 2 0 1 2
COMBINED 0 0 2 0 1 2
Homo sapiens ATG12-ATG5 CONJUGATE 0 0 2 0 1 2
FAT10YLATION 0 0 696 0 659 5
ISGYLATION 0 0 28 0 28 7
NEDDYLATION 0 0 1,093 0 903 75
SUMOYLATION 0 0 4,392 0 2,317 330
UBIQUITINATION 557,255 292,806 39,038 50,371 10,466 3,117
COMBINED 557,255 292,806 45,249 50,371 10,703 3,407
Human Herpesvirus 1 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 4 0 3 4
COMBINED 0 0 5 0 3 5
Human Herpesvirus 4 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 2 0 1 1
Human Herpesvirus 6A SUMOYLATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Human Herpesvirus 8 UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Human Immunodeficiency Virus 1 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 18 0 6 18
COMBINED 0 0 19 0 6 18
Macaca mulatta UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Mus musculus ATG12-ATG5 CONJUGATE 0 0 1 0 1 1
ISGYLATION 0 0 43 0 42 2
NEDDYLATION 0 0 7 0 6 5
SUMOYLATION 0 0 49 0 41 39
UBIQUITINATION 34,482 34,482 737 13,810 3,872 444
UFMYLATION 0 0 10 0 10 1
COMBINED 34,482 34,482 847 13,810 3,901 484
Rattus norvegicus NEDDYLATION 0 0 1 0 1 1
SUMOYLATION 0 0 6 0 6 6
UBIQUITINATION 0 0 38 0 35 35
COMBINED 0 0 45 0 40 40
Saccharomyces cerevisiae (S288c) NEDDYLATION 0 0 10 0 4 9
PHOSPHORYLATION 42,907 19,981 0 3,165 3,165 528
SUMOYLATION 0 0 1,438 0 818 67
UBIQUITINATION 34,338 20,019 9,736 2,549 3,678 215
COMBINED 77,245 40,000 11,184 3,918 4,499 802
Schizosaccharomyces pombe (972h) UBIQUITINATION 0 0 4 0 4 3
COMBINED 0 0 4 0 4 3
Xenopus laevis UBIQUITINATION 0 0 2 0 2 2
COMBINED 0 0 2 0 2 2
All Organisms ATG12-ATG5 CONJUGATE 0 0 3 0 2 3
FAT10YLATION 0 0 696 0 659 5
ISGYLATION 0 0 71 0 70 8
NEDDYLATION 0 0 1,113 0 916 84
PHOSPHORYLATION 42,907 19,981 0 3,165 3,165 528
SUMOYLATION 0 0 5,898 0 3,195 433
UBIQUITINATION 626,075 347,307 49,605 66,730 18,093 3,740
UFMYLATION 0 0 10 0 10 1
COMBINED 668,982 367,288 57,396 68,099 19,194 4,642

Note: Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions.

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statistics.txt · Last modified: 2019/06/28 02:30 by biogridadmin