BioGRID Database Statistics

This page shows the latest snapshot of statistics for the BioGRID database. All previous snapshots are archived below separated by year.

  • Raw Interactions - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice.
  • Non-Redundant Interactions - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication.

Current Build Statistics (3.4.161) - June 2018

Physical and Genetic Interaction Statistics

Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications
Anopheles gambiae (PEST) PHYSICAL 2 1 2 2
GENETIC 0 0 0 0
COMBINED 2 1 2 2
Apis mellifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Arabidopsis thaliana (Columbia) PHYSICAL 42,632 35,893 9,570 2,282
GENETIC 350 282 304 154
COMBINED 42,982 36,088 9,625 2,362
Bacillus subtilis (168) PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Bos taurus PHYSICAL 437 398 428 181
GENETIC 0 0 0 0
COMBINED 437 398 428 181
Caenorhabditis elegans PHYSICAL 6,350 5,805 3,281 193
GENETIC 2,336 2,269 1,130 34
COMBINED 8,686 8,051 3,954 211
Candida albicans (SC5314) PHYSICAL 240 152 156 52
GENETIC 278 270 274 10
COMBINED 518 420 407 61
Canis familiaris PHYSICAL 45 34 51 23
GENETIC 0 0 0 0
COMBINED 45 34 51 23
Cavia porcellus PHYSICAL 7 5 9 5
GENETIC 0 0 0 0
COMBINED 7 5 9 5
Chlamydomonas reinhardtii PHYSICAL 17 16 19 4
GENETIC 0 0 0 0
COMBINED 17 16 19 4
Chlorocebus sabaeus PHYSICAL 5 3 5 2
GENETIC 0 0 0 0
COMBINED 5 3 5 2
Cricetulus griseus PHYSICAL 24 24 32 8
GENETIC 0 0 0 0
COMBINED 24 24 32 8
Danio rerio PHYSICAL 220 194 189 37
GENETIC 70 64 65 30
COMBINED 290 255 247 66
Dictyostelium discoideum (AX4) PHYSICAL 24 17 20 7
GENETIC 6 6 8 2
COMBINED 30 20 24 8
Drosophila melanogaster PHYSICAL 54,515 47,000 8,843 2,788
GENETIC 13,440 9,412 2,958 4,156
COMBINED 67,955 55,279 9,186 6,200
Emericella nidulans (FGSC A4) PHYSICAL 65 57 57 3
GENETIC 6 5 7 3
COMBINED 71 62 64 6
Equus caballus PHYSICAL 2 2 4 2
GENETIC 0 0 0 0
COMBINED 2 2 4 2
Escherichia coli (K12) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Escherichia coli (K12/MC4100/BW2952) PHYSICAL 9 9 10 2
GENETIC 0 0 0 0
COMBINED 9 9 10 2
Escherichia coli (K12/MG1655) PHYSICAL 113 109 116 23
GENETIC 26 25 36 12
COMBINED 139 133 150 35
Escherichia coli (K12/W3110) PHYSICAL 12,804 12,801 2,045 3
GENETIC 171,219 169,594 3,973 4
COMBINED 184,023 181,621 4,063 7
Gallus gallus PHYSICAL 478 410 381 82
GENETIC 13 10 15 10
COMBINED 491 419 390 91
Glycine max PHYSICAL 46 40 45 8
GENETIC 0 0 0 0
COMBINED 46 40 45 8
Hepatitus C Virus PHYSICAL 188 129 131 31
GENETIC 0 0 0 0
COMBINED 188 129 131 31
Homo sapiens PHYSICAL 446,290 330,754 22,733 27,327
GENETIC 2,220 2,164 1,792 319
COMBINED 448,510 332,608 23,040 27,448
Human Herpesvirus 1 PHYSICAL 228 176 163 42
GENETIC 6 6 7 1
COMBINED 234 181 168 42
Human Herpesvirus 2 PHYSICAL 4 3 5 3
GENETIC 0 0 0 0
COMBINED 4 3 5 3
Human Herpesvirus 3 PHYSICAL 4 2 4 2
GENETIC 0 0 0 0
COMBINED 4 2 4 2
Human Herpesvirus 4 PHYSICAL 313 230 236 38
GENETIC 0 0 0 0
COMBINED 313 230 236 38
Human Herpesvirus 5 PHYSICAL 115 80 91 22
GENETIC 0 0 0 0
COMBINED 115 80 91 22
Human Herpesvirus 6A PHYSICAL 9 6 9 5
GENETIC 0 0 0 0
COMBINED 9 6 9 5
Human Herpesvirus 6B PHYSICAL 4 4 7 3
GENETIC 0 0 0 0
COMBINED 4 4 7 3
Human Herpesvirus 8 PHYSICAL 759 684 713 35
GENETIC 0 0 0 0
COMBINED 759 684 713 35
Human Immunodeficiency Virus 1 PHYSICAL 1,969 1,304 1,119 336
GENETIC 1 1 2 1
COMBINED 1,970 1,304 1,119 337
Human Immunodeficiency Virus 2 PHYSICAL 20 12 16 11
GENETIC 0 0 0 0
COMBINED 20 12 16 11
Human papillomavirus (16) PHYSICAL 26 11 13 8
GENETIC 0 0 0 0
COMBINED 26 11 13 8
Macaca mulatta PHYSICAL 22 13 15 13
GENETIC 0 0 0 0
COMBINED 22 13 15 13
Meleagris gallopavo PHYSICAL 2 2 2 1
GENETIC 0 0 0 0
COMBINED 2 2 2 1
Mus musculus PHYSICAL 44,220 38,290 12,917 3,711
GENETIC 377 332 336 192
COMBINED 44,597 38,549 12,978 3,846
Mycobacterium tuberculosis (H37Rv) PHYSICAL 11 9 11 2
GENETIC 0 0 0 0
COMBINED 11 9 11 2
Neurospora crassa (OR74A) PHYSICAL 11 10 12 2
GENETIC 0 0 0 0
COMBINED 11 10 12 2
Nicotiana tomentosiformis PHYSICAL 3 2 2 1
GENETIC 0 0 0 0
COMBINED 3 2 2 1
Oryctolagus cuniculus PHYSICAL 285 254 268 57
GENETIC 0 0 0 0
COMBINED 285 254 268 57
Oryza sativa (Japonica) PHYSICAL 108 92 75 19
GENETIC 2 2 3 1
COMBINED 110 94 75 19
Pan troglodytes PHYSICAL 5 4 8 4
GENETIC 0 0 0 0
COMBINED 5 4 8 4
Pediculus humanus PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Plasmodium falciparum (3D7) PHYSICAL 2,545 2,508 1,227 5
GENETIC 0 0 0 0
COMBINED 2,545 2,508 1,227 5
Rattus norvegicus PHYSICAL 6,012 5,031 3,591 1,072
GENETIC 19 19 31 12
COMBINED 6,031 5,041 3,601 1,075
Ricinus communis PHYSICAL 5 2 3 2
GENETIC 0 0 0 0
COMBINED 5 2 3 2
Saccharomyces cerevisiae (S288c) PHYSICAL 160,703 107,174 6,892 9,000
GENETIC 571,110 438,000 5,956 8,747
COMBINED 731,813 532,611 7,153 14,939
Schizosaccharomyces pombe (972h) PHYSICAL 13,118 9,552 2,983 1,328
GENETIC 59,032 50,003 3,377 1,548
COMBINED 72,150 58,703 4,317 2,286
Selaginella moellendorffii PHYSICAL 8 6 5 1
GENETIC 2 2 3 1
COMBINED 10 8 6 1
Simian Immunodeficiency Virus PHYSICAL 34 16 19 16
GENETIC 0 0 0 0
COMBINED 34 16 19 16
Simian Virus 40 PHYSICAL 9 5 6 5
GENETIC 0 0 0 0
COMBINED 9 5 6 5
Solanum lycopersicum PHYSICAL 137 107 44 8
GENETIC 4 4 4 1
COMBINED 141 109 45 8
Solanum tuberosum PHYSICAL 3 3 5 3
GENETIC 0 0 0 0
COMBINED 3 3 5 3
Strongylocentrotus purpuratus PHYSICAL 17 16 17 3
GENETIC 0 0 0 0
COMBINED 17 16 17 3
Sus scrofa PHYSICAL 83 79 94 28
GENETIC 0 0 0 0
COMBINED 83 79 94 28
Tobacco Mosaic Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Ustilago maydis (521) PHYSICAL 3 3 3 3
GENETIC 1 1 2 1
COMBINED 4 4 4 4
Vaccinia Virus PHYSICAL 7 6 8 3
GENETIC 0 0 0 0
COMBINED 7 6 8 3
Vitis vinifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Xenopus laevis PHYSICAL 1,359 1,204 1,106 218
GENETIC 7 7 10 3
COMBINED 1,366 1,211 1,116 221
Zea mays PHYSICAL 18 13 21 9
GENETIC 0 0 0 0
COMBINED 18 13 21 9
All Organisms PHYSICAL 765,847 572,774 63,713 44,677
GENETIC 819,981 671,954 19,675 15,054
COMBINED 1,585,828 1,228,924 68,716 55,209

Chemical Interaction Statistics

Organism Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications Unique Chemicals
Bacillus subtilis (168) 164 85 49 15 79
Caenorhabditis elegans 8 4 4 2 1
Candida albicans (SC5314) 108 25 7 50 24
Escherichia coli (K12) 5 2 2 3 2
Escherichia coli (K12/MG1655) 1,590 834 287 137 583
Homo sapiens 25,533 10,659 2,138 8,824 4,455
Human Herpesvirus 1 65 24 3 24 21
Human Herpesvirus 4 10 3 3 6 3
Human Immunodeficiency Virus 1 105 53 2 48 53
Leishmania major (Friedlin) 8 4 1 2 4
Mus musculus 2 1 1 2 1
Mycobacterium tuberculosis (CDC1551) 3 3 3 1 3
Mycobacterium tuberculosis (H37Rv) 1 1 1 1 1
Mycoplasma pneumoniae (M129) 2 1 1 2 1
Plasmodium falciparum (3D7) 4 1 1 4 1
Rattus norvegicus 2 2 1 2 2
Saccharomyces cerevisiae (S288c) 7 7 2 2 7
Streptococcus pneumoniae (ATCCBAA255) 82 72 8 11 29
Streptococcus pneumoniae (ATCCBAA334) 61 26 10 18 19
Synechococcus elongatus (PCC6301) 4 2 1 2 2
Vaccinia Virus 21 11 2 3 11
All Organisms 27,785 11,820 2,527 9,099 5,035

Post Translational Modification (PTM) Statistics

Organism PTM Sites Un-assigned Sites Unique Proteins Unique Genes Unique Publications
Arabidopsis thaliana (Columbia) SUMOYLATION 0 2 0 2 1
UBIQUITINATION 0 8 0 8 8
COMBINED 0 10 0 10 9
Bos taurus SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 1 0 1 1
COMBINED 0 3 0 3 3
Caenorhabditis elegans SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Chlorocebus sabaeus UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Cricetulus griseus UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Danio rerio SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 4 0 4 3
COMBINED 0 5 0 5 4
Drosophila melanogaster NEDDYLATION 0 2 0 2 1
SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 7 0 7 4
COMBINED 0 11 0 9 6
Gallus gallus SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 1 0 1 1
COMBINED 0 2 0 1 1
Hepatitus C Virus UBIQUITINATION 0 1 0 1 2
COMBINED 0 1 0 1 2
Homo sapiens ATG12-ATG5 CONJUGATE 0 1 0 1 2
FAT10YLATION 0 659 0 659 5
ISGYLATION 0 28 0 28 7
NEDDYLATION 0 903 0 903 75
SUMOYLATION 0 2,317 0 2,317 330
UBIQUITINATION 0 10,000 0 10,000 3,114
COMBINED 0 13,908 0 10,260 3,404
Human Herpesvirus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 3 0 3 4
COMBINED 0 4 0 3 5
Human Herpesvirus 4 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 1 0 1 1
COMBINED 0 2 0 1 1
Human Herpesvirus 6A SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Human Herpesvirus 8 UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Human Immunodeficiency Virus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 6 0 6 18
COMBINED 0 7 0 6 18
Macaca mulatta UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Mus musculus ATG12-ATG5 CONJUGATE 0 1 0 1 1
ISGYLATION 0 42 0 42 2
NEDDYLATION 0 6 0 6 5
SUMOYLATION 0 41 0 41 39
UBIQUITINATION 0 556 0 556 443
UFMYLATION 0 10 0 10 1
COMBINED 0 656 0 623 483
Rattus norvegicus NEDDYLATION 0 1 0 1 1
SUMOYLATION 0 6 0 6 6
UBIQUITINATION 0 35 0 35 35
COMBINED 0 42 0 40 40
Saccharomyces cerevisiae (S288c) NEDDYLATION 0 4 0 4 9
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 818 0 818 67
UBIQUITINATION 0 3,562 0 3,562 213
COMBINED 19,981 4,384 3,165 4,443 800
Schizosaccharomyces pombe (972h) UBIQUITINATION 0 4 0 4 3
COMBINED 0 4 0 4 3
Xenopus laevis UBIQUITINATION 0 2 0 2 2
COMBINED 0 2 0 2 2
All Organisms ATG12-ATG5 CONJUGATE 0 2 0 2 3
FAT10YLATION 0 659 0 659 5
ISGYLATION 0 70 0 70 8
NEDDYLATION 0 916 0 916 84
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 3,195 0 3,195 433
UBIQUITINATION 0 14,195 0 14,195 3,736
UFMYLATION 0 10 0 10 1
COMBINED 19,981 19,047 3,165 15,417 4,638

Note: Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions.

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statistics.txt · Last modified: 2018/06/01 01:40 by biogridadmin