BioGRID Database Statistics

This page shows the latest snapshot of statistics for the BioGRID database. All previous snapshots are archived below separated by year.

  • Raw Interactions - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice.
  • Non-Redundant Interactions - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication.

Current Build Statistics (3.5.172) - May 2019

Physical and Genetic Interaction Statistics

Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications
Anopheles gambiae (PEST) PHYSICAL 2 1 2 2
GENETIC 0 0 0 0
COMBINED 2 1 2 2
Apis mellifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Arabidopsis thaliana (Columbia) PHYSICAL 55,613 48,572 10,417 2,298
GENETIC 350 282 304 154
COMBINED 55,963 48,767 10,467 2,378
Bacillus subtilis (168) PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Bos taurus PHYSICAL 479 431 455 191
GENETIC 0 0 0 0
COMBINED 479 431 455 191
Caenorhabditis elegans PHYSICAL 6,362 5,809 3,281 197
GENETIC 2,336 2,269 1,130 34
COMBINED 8,698 8,055 3,954 215
Candida albicans (SC5314) PHYSICAL 1,060 861 695 148
GENETIC 477 403 325 30
COMBINED 1,537 1,250 935 161
Canis familiaris PHYSICAL 138 126 144 26
GENETIC 0 0 0 0
COMBINED 138 126 144 26
Cavia porcellus PHYSICAL 7 5 9 5
GENETIC 0 0 0 0
COMBINED 7 5 9 5
Chlamydomonas reinhardtii PHYSICAL 17 16 19 4
GENETIC 0 0 0 0
COMBINED 17 16 19 4
Chlorocebus sabaeus PHYSICAL 11 9 14 5
GENETIC 0 0 0 0
COMBINED 11 9 14 5
Cricetulus griseus PHYSICAL 55 55 65 10
GENETIC 0 0 0 0
COMBINED 55 55 65 10
Danio rerio PHYSICAL 224 197 192 40
GENETIC 70 64 65 30
COMBINED 294 258 250 69
Dictyostelium discoideum (AX4) PHYSICAL 24 17 20 7
GENETIC 6 6 8 2
COMBINED 30 20 24 8
Drosophila melanogaster PHYSICAL 62,204 52,402 9,001 3,684
GENETIC 14,475 10,140 3,146 4,394
COMBINED 76,679 61,190 9,338 7,153
Emericella nidulans (FGSC A4) PHYSICAL 65 57 57 3
GENETIC 6 5 7 3
COMBINED 71 62 64 6
Equus caballus PHYSICAL 2 2 4 2
GENETIC 0 0 0 0
COMBINED 2 2 4 2
Escherichia coli (K12) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Escherichia coli (K12/MC4100/BW2952) PHYSICAL 9 9 10 2
GENETIC 0 0 0 0
COMBINED 9 9 10 2
Escherichia coli (K12/MG1655) PHYSICAL 114 110 118 24
GENETIC 26 25 36 12
COMBINED 140 134 152 36
Escherichia coli (K12/W3110) PHYSICAL 12,804 12,801 2,045 3
GENETIC 171,219 169,594 3,973 4
COMBINED 184,023 181,621 4,063 7
Gallus gallus PHYSICAL 500 425 400 92
GENETIC 13 10 15 10
COMBINED 513 434 408 101
Glycine max PHYSICAL 46 40 45 8
GENETIC 0 0 0 0
COMBINED 46 40 45 8
Hepatitus C Virus PHYSICAL 197 133 135 34
GENETIC 0 0 0 0
COMBINED 197 133 135 34
Homo sapiens PHYSICAL 497,080 369,023 23,222 29,346
GENETIC 7,508 7,420 2,435 330
COMBINED 504,588 375,840 23,527 29,476
Human Herpesvirus 1 PHYSICAL 265 204 173 48
GENETIC 6 6 7 1
COMBINED 271 209 178 48
Human Herpesvirus 2 PHYSICAL 6 4 7 4
GENETIC 0 0 0 0
COMBINED 6 4 7 4
Human Herpesvirus 3 PHYSICAL 5 3 6 3
GENETIC 0 0 0 0
COMBINED 5 3 6 3
Human Herpesvirus 4 PHYSICAL 408 308 307 46
GENETIC 0 0 0 0
COMBINED 408 308 307 46
Human Herpesvirus 5 PHYSICAL 118 82 94 25
GENETIC 0 0 0 0
COMBINED 118 82 94 25
Human Herpesvirus 6A PHYSICAL 11 8 12 7
GENETIC 0 0 0 0
COMBINED 11 8 12 7
Human Herpesvirus 6B PHYSICAL 4 4 7 3
GENETIC 0 0 0 0
COMBINED 4 4 7 3
Human Herpesvirus 7 PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human Herpesvirus 8 PHYSICAL 777 692 715 41
GENETIC 0 0 0 0
COMBINED 777 692 715 41
Human Immunodeficiency Virus 1 PHYSICAL 1,996 1,315 1,127 347
GENETIC 1 1 2 1
COMBINED 1,997 1,315 1,127 348
Human Immunodeficiency Virus 2 PHYSICAL 20 12 16 11
GENETIC 0 0 0 0
COMBINED 20 12 16 11
Human papillomavirus (10) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human papillomavirus (16) PHYSICAL 238 176 163 20
GENETIC 0 0 0 0
COMBINED 238 176 163 20
Human papillomavirus (6b) PHYSICAL 20 20 22 2
GENETIC 0 0 0 0
COMBINED 20 20 22 2
Macaca mulatta PHYSICAL 22 13 15 13
GENETIC 0 0 0 0
COMBINED 22 13 15 13
Meleagris gallopavo PHYSICAL 2 2 2 1
GENETIC 0 0 0 0
COMBINED 2 2 2 1
Mus musculus PHYSICAL 46,480 40,220 13,225 3,928
GENETIC 378 333 337 193
COMBINED 46,858 40,480 13,284 4,064
Mycobacterium tuberculosis (H37Rv) PHYSICAL 12 10 13 3
GENETIC 0 0 0 0
COMBINED 12 10 13 3
Neurospora crassa (OR74A) PHYSICAL 11 10 12 2
GENETIC 0 0 0 0
COMBINED 11 10 12 2
Nicotiana tomentosiformis PHYSICAL 3 2 2 1
GENETIC 0 0 0 0
COMBINED 3 2 2 1
Oryctolagus cuniculus PHYSICAL 313 280 285 62
GENETIC 0 0 0 0
COMBINED 313 280 285 62
Oryza sativa (Japonica) PHYSICAL 343 327 310 20
GENETIC 2 2 3 1
COMBINED 345 329 310 20
Ovis aries PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Pan troglodytes PHYSICAL 6 5 10 5
GENETIC 0 0 0 0
COMBINED 6 5 10 5
Pediculus humanus PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Plasmodium falciparum (3D7) PHYSICAL 2,545 2,508 1,227 5
GENETIC 0 0 0 0
COMBINED 2,545 2,508 1,227 5
Rattus norvegicus PHYSICAL 7,756 6,607 4,146 1,147
GENETIC 19 19 31 12
COMBINED 7,775 6,617 4,156 1,150
Ricinus communis PHYSICAL 5 2 3 2
GENETIC 0 0 0 0
COMBINED 5 2 3 2
Saccharomyces cerevisiae (S288c) PHYSICAL 169,956 113,279 6,906 9,365
GENETIC 574,160 439,878 5,957 9,100
COMBINED 744,116 539,920 7,163 15,521
Schizosaccharomyces pombe (972h) PHYSICAL 14,699 10,638 3,206 1,510
GENETIC 60,530 51,003 3,473 1,857
COMBINED 75,229 60,664 4,435 2,663
Selaginella moellendorffii PHYSICAL 8 6 5 1
GENETIC 2 2 3 1
COMBINED 10 8 6 1
Simian Immunodeficiency Virus PHYSICAL 34 16 19 16
GENETIC 0 0 0 0
COMBINED 34 16 19 16
Simian Virus 40 PHYSICAL 10 5 6 6
GENETIC 0 0 0 0
COMBINED 10 5 6 6
Solanum lycopersicum PHYSICAL 137 107 44 8
GENETIC 4 4 4 1
COMBINED 141 109 45 8
Solanum tuberosum PHYSICAL 3 3 5 3
GENETIC 0 0 0 0
COMBINED 3 3 5 3
Strongylocentrotus purpuratus PHYSICAL 17 16 17 3
GENETIC 0 0 0 0
COMBINED 17 16 17 3
Sus scrofa PHYSICAL 84 80 96 29
GENETIC 0 0 0 0
COMBINED 84 80 96 29
Tobacco Mosaic Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Ustilago maydis (521) PHYSICAL 3 3 3 3
GENETIC 1 1 2 1
COMBINED 4 4 4 4
Vaccinia Virus PHYSICAL 7 6 8 3
GENETIC 0 0 0 0
COMBINED 7 6 8 3
Vitis vinifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Xenopus laevis PHYSICAL 1,383 1,227 1,127 225
GENETIC 7 7 10 3
COMBINED 1,390 1,234 1,137 228
Zea mays PHYSICAL 18 13 21 9
GENETIC 0 0 0 0
COMBINED 18 13 21 9
All Organisms PHYSICAL 852,624 640,241 66,751 48,307
GENETIC 831,046 680,947 20,651 15,982
COMBINED 1,683,670 1,304,061 71,619 59,319

Chemical Interaction Statistics

Organism Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications Unique Chemicals
Bacillus subtilis (168) 164 85 49 15 79
Caenorhabditis elegans 8 4 4 2 1
Candida albicans (SC5314) 108 25 7 50 24
Escherichia coli (K12) 5 2 2 3 2
Escherichia coli (K12/MG1655) 1,590 834 287 137 583
Homo sapiens 25,841 10,854 2,183 8,944 4,593
Human Herpesvirus 1 65 24 3 24 21
Human Herpesvirus 4 10 3 3 6 3
Human Immunodeficiency Virus 1 105 53 2 48 53
Leishmania major (Friedlin) 8 4 1 2 4
Mus musculus 2 1 1 2 1
Mycobacterium tuberculosis (CDC1551) 3 3 3 1 3
Mycobacterium tuberculosis (H37Rv) 1 1 1 1 1
Mycoplasma pneumoniae (M129) 2 1 1 2 1
Plasmodium falciparum (3D7) 4 1 1 4 1
Rattus norvegicus 2 2 1 2 2
Saccharomyces cerevisiae (S288c) 7 7 2 2 7
Streptococcus pneumoniae (ATCCBAA255) 82 72 8 11 29
Streptococcus pneumoniae (ATCCBAA334) 61 26 10 18 19
Synechococcus elongatus (PCC6301) 4 2 1 2 2
Vaccinia Virus 21 11 2 3 11
All Organisms 28,093 12,015 2,572 9,219 5,173

Post Translational Modification (PTM) Statistics

Organism PTM Raw Sites NR Sites Un-assigned Sites Unique Proteins Unique Genes Unique Publications
Arabidopsis thaliana (Columbia) SUMOYLATION 0 0 2 0 2 1
UBIQUITINATION 0 0 8 0 8 8
COMBINED 0 0 10 0 10 9
Bos taurus SUMOYLATION 0 0 2 0 2 2
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 3 0 3 3
Caenorhabditis elegans SUMOYLATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Chlorocebus sabaeus UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Cricetulus griseus UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Danio rerio SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 4 0 4 3
COMBINED 0 0 5 0 5 4
Drosophila melanogaster NEDDYLATION 0 0 2 0 2 1
SUMOYLATION 0 0 2 0 2 2
UBIQUITINATION 0 0 7 0 7 4
COMBINED 0 0 11 0 9 6
Gallus gallus SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 2 0 1 1
Hepatitus C Virus UBIQUITINATION 0 0 2 0 1 2
COMBINED 0 0 2 0 1 2
Homo sapiens ATG12-ATG5 CONJUGATE 0 0 2 0 1 2
FAT10YLATION 0 0 696 0 659 5
ISGYLATION 0 0 28 0 28 7
NEDDYLATION 0 0 1,093 0 903 75
SUMOYLATION 0 0 4,392 0 2,317 330
UBIQUITINATION 557,255 292,806 39,038 50,371 10,466 3,117
COMBINED 557,255 292,806 45,249 50,371 10,703 3,407
Human Herpesvirus 1 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 4 0 3 4
COMBINED 0 0 5 0 3 5
Human Herpesvirus 4 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 2 0 1 1
Human Herpesvirus 6A SUMOYLATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Human Herpesvirus 8 UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Human Immunodeficiency Virus 1 SUMOYLATION 0 0 1 0 1 1
UBIQUITINATION 0 0 18 0 6 18
COMBINED 0 0 19 0 6 18
Macaca mulatta UBIQUITINATION 0 0 1 0 1 1
COMBINED 0 0 1 0 1 1
Mus musculus ATG12-ATG5 CONJUGATE 0 0 1 0 1 1
ISGYLATION 0 0 43 0 42 2
NEDDYLATION 0 0 7 0 6 5
SUMOYLATION 0 0 49 0 41 39
UBIQUITINATION 34,482 34,482 737 13,810 3,872 444
UFMYLATION 0 0 10 0 10 1
COMBINED 34,482 34,482 847 13,810 3,901 484
Rattus norvegicus NEDDYLATION 0 0 1 0 1 1
SUMOYLATION 0 0 6 0 6 6
UBIQUITINATION 0 0 38 0 35 35
COMBINED 0 0 45 0 40 40
Saccharomyces cerevisiae (S288c) NEDDYLATION 0 0 10 0 4 9
PHOSPHORYLATION 42,907 19,981 0 3,165 3,165 528
SUMOYLATION 0 0 1,438 0 818 67
UBIQUITINATION 34,338 20,019 9,736 2,549 3,678 215
COMBINED 77,245 40,000 11,184 3,918 4,499 802
Schizosaccharomyces pombe (972h) UBIQUITINATION 0 0 4 0 4 3
COMBINED 0 0 4 0 4 3
Xenopus laevis UBIQUITINATION 0 0 2 0 2 2
COMBINED 0 0 2 0 2 2
All Organisms ATG12-ATG5 CONJUGATE 0 0 3 0 2 3
FAT10YLATION 0 0 696 0 659 5
ISGYLATION 0 0 71 0 70 8
NEDDYLATION 0 0 1,113 0 916 84
PHOSPHORYLATION 42,907 19,981 0 3,165 3,165 528
SUMOYLATION 0 0 5,898 0 3,195 433
UBIQUITINATION 626,075 347,307 49,605 66,730 18,093 3,740
UFMYLATION 0 0 10 0 10 1
COMBINED 668,982 367,288 57,396 68,099 19,194 4,642

Note: Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions.

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statistics.txt · Last modified: 2019/05/01 01:22 by biogridadmin