Build Statistics (3.4.131) - December 2015

This page shows the statistics for the BioGRID database as was established via the above referenced data and release version. If you are interested in accessing the data from this exact build, please visit our download page and find the correct version under “Release Archive”. It is highly recommended that all new projects use the latest BioGRID release when possible.

  • Raw Interactions - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice.
  • Non-Redundant Interactions - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication.

Physical and Genetic Interaction Statistics

Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications
Anopheles gambiae (PEST) PHYSICAL 2 1 2 2
GENETIC 0 0 0 0
COMBINED 2 1 2 2
Apis mellifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Arabidopsis thaliana (Columbia) PHYSICAL 40,096 34,394 9,250 1,960
GENETIC 246 185 182 97
COMBINED 40,342 34,536 9,298 2,027
Bacillus subtilis (168) PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Bos taurus PHYSICAL 413 374 400 161
GENETIC 0 0 0 0
COMBINED 413 374 400 161
Caenorhabditis elegans PHYSICAL 6,318 5,783 3,269 184
GENETIC 2,330 2,263 1,123 31
COMBINED 8,648 8,023 3,943 199
Candida albicans (SC5314) PHYSICAL 147 114 128 38
GENETIC 268 263 266 7
COMBINED 415 376 373 44
Canis familiaris PHYSICAL 38 28 45 21
GENETIC 0 0 0 0
COMBINED 38 28 45 21
Cavia porcellus PHYSICAL 6 4 7 4
GENETIC 0 0 0 0
COMBINED 6 4 7 4
Chlamydomonas reinhardtii PHYSICAL 15 14 16 3
GENETIC 0 0 0 0
COMBINED 15 14 16 3
Chlorocebus sabaeus PHYSICAL 4 3 4 1
GENETIC 0 0 0 0
COMBINED 4 3 4 1
Cricetulus griseus PHYSICAL 6 6 11 5
GENETIC 0 0 0 0
COMBINED 6 6 11 5
Danio rerio PHYSICAL 214 188 181 33
GENETIC 70 64 65 30
COMBINED 284 249 239 62
Dictyostelium discoideum (AX4) PHYSICAL 24 17 20 7
GENETIC 6 6 8 2
COMBINED 30 20 24 8
Drosophila melanogaster PHYSICAL 37,811 36,742 8,072 439
GENETIC 9,978 2,823 1,039 1,482
COMBINED 47,789 39,416 8,219 1,864
Emericella nidulans (FGSC A4) PHYSICAL 65 57 57 3
GENETIC 6 5 7 3
COMBINED 71 62 64 6
Equus caballus PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Escherichia coli (K12/MG1655) PHYSICAL 102 99 104 14
GENETIC 26 25 36 12
COMBINED 128 123 138 26
Escherichia coli (K12/W3110) PHYSICAL 6 3 4 2
GENETIC 134,467 133,779 3,923 2
COMBINED 134,473 133,782 3,924 4
Gallus gallus PHYSICAL 401 339 329 69
GENETIC 9 6 10 7
COMBINED 410 344 336 75
Glycine max PHYSICAL 23 20 22 4
GENETIC 0 0 0 0
COMBINED 23 20 22 4
Hepatitus C Virus PHYSICAL 164 110 112 24
GENETIC 0 0 0 0
COMBINED 164 110 112 24
Homo sapiens PHYSICAL 309,356 230,743 20,004 24,403
GENETIC 1,533 1,496 1,465 282
COMBINED 310,889 231,986 20,333 24,503
Human Herpesvirus 1 PHYSICAL 177 134 134 37
GENETIC 6 6 7 1
COMBINED 183 139 139 37
Human Herpesvirus 2 PHYSICAL 4 3 5 3
GENETIC 0 0 0 0
COMBINED 4 3 5 3
Human Herpesvirus 3 PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human Herpesvirus 4 PHYSICAL 295 217 223 33
GENETIC 0 0 0 0
COMBINED 295 217 223 33
Human Herpesvirus 5 PHYSICAL 79 61 71 15
GENETIC 0 0 0 0
COMBINED 79 61 71 15
Human Herpesvirus 6A PHYSICAL 6 4 6 4
GENETIC 0 0 0 0
COMBINED 6 4 6 4
Human Herpesvirus 6B PHYSICAL 2 2 4 2
GENETIC 0 0 0 0
COMBINED 2 2 4 2
Human Herpesvirus 8 PHYSICAL 191 142 140 25
GENETIC 0 0 0 0
COMBINED 191 142 140 25
Human Immunodeficiency Virus 1 PHYSICAL 1,800 1,189 1,027 305
GENETIC 1 1 2 1
COMBINED 1,801 1,189 1,027 306
Human Immunodeficiency Virus 2 PHYSICAL 19 12 16 10
GENETIC 0 0 0 0
COMBINED 19 12 16 10
Human papillomavirus (16) PHYSICAL 5 4 5 1
GENETIC 0 0 0 0
COMBINED 5 4 5 1
Macaca mulatta PHYSICAL 21 12 14 12
GENETIC 0 0 0 0
COMBINED 21 12 14 12
Meleagris gallopavo PHYSICAL 2 2 2 1
GENETIC 0 0 0 0
COMBINED 2 2 2 1
Mus musculus PHYSICAL 22,975 18,498 8,617 3,400
GENETIC 308 266 274 175
COMBINED 23,283 18,695 8,675 3,522
Neurospora crassa (OR74A) PHYSICAL 11 10 12 2
GENETIC 0 0 0 0
COMBINED 11 10 12 2
Nicotiana tomentosiformis PHYSICAL 3 2 2 1
GENETIC 0 0 0 0
COMBINED 3 2 2 1
Oryctolagus cuniculus PHYSICAL 204 178 188 40
GENETIC 0 0 0 0
COMBINED 204 178 188 40
Oryza sativa (Japonica) PHYSICAL 30 21 26 10
GENETIC 0 0 0 0
COMBINED 30 21 26 10
Pan troglodytes PHYSICAL 5 4 8 4
GENETIC 0 0 0 0
COMBINED 5 4 8 4
Pediculus humanus PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Plasmodium falciparum (3D7) PHYSICAL 2,545 2,508 1,227 5
GENETIC 0 0 0 0
COMBINED 2,545 2,508 1,227 5
Rattus norvegicus PHYSICAL 5,410 4,546 3,333 945
GENETIC 18 18 29 11
COMBINED 5,428 4,556 3,343 948
Ricinus communis PHYSICAL 5 2 3 2
GENETIC 0 0 0 0
COMBINED 5 2 3 2
Saccharomyces cerevisiae (S288c) PHYSICAL 127,157 82,321 6,278 7,874
GENETIC 210,795 152,052 5,704 7,703
COMBINED 337,952 227,538 6,513 13,180
Schizosaccharomyces pombe (972h) PHYSICAL 10,068 7,266 2,392 1,205
GENETIC 57,727 48,919 3,200 1,426
COMBINED 67,795 55,434 3,977 2,087
Simian Immunodeficiency Virus PHYSICAL 27 14 17 11
GENETIC 0 0 0 0
COMBINED 27 14 17 11
Solanum lycopersicum PHYSICAL 92 79 30 5
GENETIC 0 0 0 0
COMBINED 92 79 30 5
Solanum tuberosum PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Strongylocentrotus purpuratus PHYSICAL 16 15 16 2
GENETIC 0 0 0 0
COMBINED 16 15 16 2
Sus scrofa PHYSICAL 76 72 89 26
GENETIC 0 0 0 0
COMBINED 76 72 89 26
Tobacco Mosaic Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Ustilago maydis (521) PHYSICAL 3 3 3 3
GENETIC 1 1 2 1
COMBINED 4 4 4 4
Vaccinia Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Vitis vinifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Xenopus laevis PHYSICAL 684 534 474 198
GENETIC 7 7 10 3
COMBINED 691 541 484 201
Zea mays PHYSICAL 9 8 13 5
GENETIC 0 0 0 0
COMBINED 9 8 13 5
All Organisms PHYSICAL 553,827 415,633 56,105 37,804
GENETIC 417,288 341,688 16,763 11,110
COMBINED 971,115 749,213 63,026 45,623

Chemical Interaction Statistics

Organism Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications Unique Chemicals
Bacillus subtilis (168) 163 83 48 13 78
Caenorhabditis elegans 8 4 4 2 1
Candida albicans (SC5314) 108 25 7 50 24
Escherichia coli (K12/MG1655) 1,581 826 289 136 582
Homo sapiens 25,067 10,365 2,105 8,631 4,358
Human Herpesvirus 1 27 7 2 16 7
Human Herpesvirus 4 10 3 3 6 3
Human Immunodeficiency Virus 1 59 10 1 44 10
Mus musculus 2 1 1 2 1
Mycoplasma pneumoniae (M129) 2 1 1 2 1
Plasmodium falciparum (3D7) 4 1 1 4 1
Rattus norvegicus 2 2 1 2 2
Saccharomyces cerevisiae (S288c) 1 1 1 1 1
All Organisms 27,034 11,329 2,464 8,875 4,851

Post Translational Modification (PTM) Statistics

Organism PTM Sites Un-assigned Sites Unique Proteins Unique Genes Unique Publications
Arabidopsis thaliana (Columbia) UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Bos taurus SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 1 0 1 1
COMBINED 0 3 0 3 3
Caenorhabditis elegans SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Cricetulus griseus UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Danio rerio SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 4 0 4 3
COMBINED 0 5 0 5 4
Drosophila melanogaster NEDDYLATION 0 2 0 2 1
SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 7 0 7 4
COMBINED 0 11 0 9 6
Hepatitus C Virus UBIQUITINATION 0 1 0 1 2
COMBINED 0 1 0 1 2
Homo sapiens FAT10YLATION 0 659 0 659 5
ISG15YLATION 0 7 0 7 6
NEDDYLATION 0 903 0 903 75
SUMOYLATION 0 2,315 0 2,315 325
UBIQUITINATION 0 9,993 0 9,993 3,049
COMBINED 0 13,877 0 10,253 3,332
Human Herpesvirus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 3 0 3 4
COMBINED 0 4 0 3 5
Human Herpesvirus 4 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 1 0 1 1
COMBINED 0 2 0 1 1
Human Herpesvirus 6A SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Human Immunodeficiency Virus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 6 0 6 18
COMBINED 0 7 0 6 18
Macaca mulatta UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Mus musculus NEDDYLATION 0 5 0 5 3
SUMOYLATION 0 19 0 19 18
UBIQUITINATION 0 200 0 200 225
UFMYLATION 0 10 0 10 1
COMBINED 0 234 0 226 243
Rattus norvegicus NEDDYLATION 0 1 0 1 1
SUMOYLATION 0 5 0 5 5
UBIQUITINATION 0 34 0 34 33
COMBINED 0 40 0 38 37
Saccharomyces cerevisiae (S288c) NEDDYLATION 0 4 0 4 9
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 818 0 818 66
UBIQUITINATION 0 3,561 0 3,561 212
COMBINED 19,981 4,383 3,165 4,443 798
Schizosaccharomyces pombe (972h) UBIQUITINATION 0 4 0 4 3
COMBINED 0 4 0 4 3
Xenopus laevis UBIQUITINATION 0 2 0 2 2
COMBINED 0 2 0 2 2
All Organisms FAT10YLATION 0 659 0 659 5
ISG15YLATION 0 7 0 7 6
NEDDYLATION 0 915 0 915 82
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 3,167 0 3,167 405
UBIQUITINATION 0 13,820 0 13,820 3,444
UFMYLATION 0 10 0 10 1
COMBINED 19,981 18,578 3,165 14,999 4,317

View the Current Database Statistics

 
build_3.4.131.txt · Last modified: 2016/10/13 22:59 (external edit)