Build Statistics (3.4.129) - October 2015

This page shows the statistics for the BioGRID database as was established via the above referenced data and release version. If you are interested in accessing the data from this exact build, please visit our download page and find the correct version under “Release Archive”. It is highly recommended that all new projects use the latest BioGRID release when possible.

  • Raw Interactions - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice.
  • Non-Redundant Interactions - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication.

Physical and Genetic Interaction Statistics

Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications
Anopheles gambiae (PEST) PHYSICAL 2 1 2 2
GENETIC 0 0 0 0
COMBINED 2 1 2 2
Apis mellifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Arabidopsis thaliana (Columbia) PHYSICAL 39,769 34,207 9,217 1,901
GENETIC 239 178 173 94
COMBINED 40,008 34,345 9,264 1,968
Bacillus subtilis (168) PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Bos taurus PHYSICAL 412 373 399 160
GENETIC 0 0 0 0
COMBINED 412 373 399 160
Caenorhabditis elegans PHYSICAL 6,318 5,783 3,269 184
GENETIC 2,324 2,258 1,120 30
COMBINED 8,642 8,018 3,941 198
Candida albicans (SC5314) PHYSICAL 147 114 128 38
GENETIC 268 263 266 7
COMBINED 415 376 373 44
Canis familiaris PHYSICAL 38 28 45 21
GENETIC 0 0 0 0
COMBINED 38 28 45 21
Cavia porcellus PHYSICAL 6 4 7 4
GENETIC 0 0 0 0
COMBINED 6 4 7 4
Chlamydomonas reinhardtii PHYSICAL 15 14 16 3
GENETIC 0 0 0 0
COMBINED 15 14 16 3
Chlorocebus sabaeus PHYSICAL 4 3 4 1
GENETIC 0 0 0 0
COMBINED 4 3 4 1
Cricetulus griseus PHYSICAL 6 6 11 5
GENETIC 0 0 0 0
COMBINED 6 6 11 5
Danio rerio PHYSICAL 214 188 181 33
GENETIC 70 64 65 30
COMBINED 284 249 239 62
Dictyostelium discoideum (AX4) PHYSICAL 24 17 20 7
GENETIC 6 6 8 2
COMBINED 30 20 24 8
Drosophila melanogaster PHYSICAL 37,808 36,740 8,070 437
GENETIC 9,978 2,823 1,039 1,482
COMBINED 47,786 39,414 8,217 1,862
Emericella nidulans (FGSC A4) PHYSICAL 65 57 57 3
GENETIC 6 5 7 3
COMBINED 71 62 64 6
Equus caballus PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Escherichia coli (K12/MG1655) PHYSICAL 102 99 104 14
GENETIC 26 25 36 12
COMBINED 128 123 138 26
Escherichia coli (K12/W3110) PHYSICAL 6 3 4 2
GENETIC 0 0 0 0
COMBINED 6 3 4 2
Gallus gallus PHYSICAL 401 339 329 69
GENETIC 9 6 10 7
COMBINED 410 344 336 75
Glycine max PHYSICAL 23 20 22 4
GENETIC 0 0 0 0
COMBINED 23 20 22 4
Hepatitus C Virus PHYSICAL 164 110 112 24
GENETIC 0 0 0 0
COMBINED 164 110 112 24
Homo sapiens PHYSICAL 309,165 230,899 19,999 24,395
GENETIC 866 834 881 282
COMBINED 310,031 231,493 20,276 24,494
Human Herpesvirus 1 PHYSICAL 177 134 134 37
GENETIC 6 6 7 1
COMBINED 183 139 139 37
Human Herpesvirus 2 PHYSICAL 4 3 5 3
GENETIC 0 0 0 0
COMBINED 4 3 5 3
Human Herpesvirus 3 PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human Herpesvirus 4 PHYSICAL 295 217 223 33
GENETIC 0 0 0 0
COMBINED 295 217 223 33
Human Herpesvirus 5 PHYSICAL 79 61 71 15
GENETIC 0 0 0 0
COMBINED 79 61 71 15
Human Herpesvirus 6A PHYSICAL 6 4 6 4
GENETIC 0 0 0 0
COMBINED 6 4 6 4
Human Herpesvirus 6B PHYSICAL 2 2 4 2
GENETIC 0 0 0 0
COMBINED 2 2 4 2
Human Herpesvirus 8 PHYSICAL 191 142 140 25
GENETIC 0 0 0 0
COMBINED 191 142 140 25
Human Immunodeficiency Virus 1 PHYSICAL 1,792 1,187 1,027 302
GENETIC 1 1 2 1
COMBINED 1,793 1,187 1,027 303
Human Immunodeficiency Virus 2 PHYSICAL 19 12 16 10
GENETIC 0 0 0 0
COMBINED 19 12 16 10
Human papillomavirus (16) PHYSICAL 5 4 5 1
GENETIC 0 0 0 0
COMBINED 5 4 5 1
Macaca mulatta PHYSICAL 21 12 14 12
GENETIC 0 0 0 0
COMBINED 21 12 14 12
Meleagris gallopavo PHYSICAL 2 2 2 1
GENETIC 0 0 0 0
COMBINED 2 2 2 1
Mus musculus PHYSICAL 22,776 18,407 8,558 3,386
GENETIC 307 265 273 173
COMBINED 23,083 18,602 8,616 3,506
Neurospora crassa (OR74A) PHYSICAL 11 10 12 2
GENETIC 0 0 0 0
COMBINED 11 10 12 2
Oryctolagus cuniculus PHYSICAL 201 175 185 38
GENETIC 0 0 0 0
COMBINED 201 175 185 38
Oryza sativa (Japonica) PHYSICAL 19 15 18 6
GENETIC 0 0 0 0
COMBINED 19 15 18 6
Pan troglodytes PHYSICAL 5 4 8 4
GENETIC 0 0 0 0
COMBINED 5 4 8 4
Pediculus humanus PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Plasmodium falciparum (3D7) PHYSICAL 2,545 2,508 1,227 5
GENETIC 0 0 0 0
COMBINED 2,545 2,508 1,227 5
Rattus norvegicus PHYSICAL 5,385 4,528 3,323 937
GENETIC 18 18 29 11
COMBINED 5,403 4,538 3,333 940
Ricinus communis PHYSICAL 5 2 3 2
GENETIC 0 0 0 0
COMBINED 5 2 3 2
Saccharomyces cerevisiae (S288c) PHYSICAL 126,993 82,236 6,273 7,849
GENETIC 210,545 151,866 5,706 7,678
COMBINED 337,538 227,292 6,511 13,139
Schizosaccharomyces pombe (972h) PHYSICAL 10,066 7,265 2,390 1,204
GENETIC 57,728 48,920 3,200 1,427
COMBINED 67,794 55,434 3,975 2,087
Simian Immunodeficiency Virus PHYSICAL 27 14 17 11
GENETIC 0 0 0 0
COMBINED 27 14 17 11
Solanum lycopersicum PHYSICAL 92 79 30 5
GENETIC 0 0 0 0
COMBINED 92 79 30 5
Solanum tuberosum PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Strongylocentrotus purpuratus PHYSICAL 15 15 16 1
GENETIC 0 0 0 0
COMBINED 15 15 16 1
Sus scrofa PHYSICAL 76 72 89 26
GENETIC 0 0 0 0
COMBINED 76 72 89 26
Tobacco Mosaic Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Ustilago maydis (521) PHYSICAL 3 3 3 3
GENETIC 1 1 2 1
COMBINED 4 4 4 4
Vaccinia Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Vitis vinifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Xenopus laevis PHYSICAL 680 532 471 197
GENETIC 7 7 10 3
COMBINED 687 539 481 200
Zea mays PHYSICAL 9 8 13 5
GENETIC 0 0 0 0
COMBINED 9 8 13 5
All Organisms PHYSICAL 553,063 415,481 56,057 37,702
GENETIC 281,885 207,043 12,234 11,073
COMBINED 834,948 614,457 59,000 45,497

Chemical Interaction Statistics

Organism Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications Unique Chemicals
Bacillus subtilis (168) 163 83 48 13 78
Caenorhabditis elegans 8 4 4 2 1
Candida albicans (SC5314) 108 25 7 50 24
Escherichia coli (K12/MG1655) 1,581 826 289 136 582
Homo sapiens 25,067 10,365 2,105 8,631 4,358
Human Herpesvirus 1 27 7 2 16 7
Human Herpesvirus 4 10 3 3 6 3
Human Immunodeficiency Virus 1 59 10 1 44 10
Mus musculus 2 1 1 2 1
Mycoplasma pneumoniae (M129) 2 1 1 2 1
Plasmodium falciparum (3D7) 4 1 1 4 1
Rattus norvegicus 2 2 1 2 2
Saccharomyces cerevisiae (S288c) 1 1 1 1 1
All Organisms 27,034 11,329 2,464 8,875 4,851

Post Translational Modification (PTM) Statistics

Organism PTM Sites Un-assigned Sites Unique Proteins Unique Genes Unique Publications
Arabidopsis thaliana (Columbia) UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Bos taurus SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 1 0 1 1
COMBINED 0 3 0 3 3
Caenorhabditis elegans SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Cricetulus griseus UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Danio rerio SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 4 0 4 3
COMBINED 0 5 0 5 4
Drosophila melanogaster NEDDYLATION 0 2 0 2 1
SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 7 0 7 4
COMBINED 0 11 0 9 6
Hepatitus C Virus UBIQUITINATION 0 1 0 1 2
COMBINED 0 1 0 1 2
Homo sapiens FAT10YLATION 0 659 0 659 5
ISG15YLATION 0 7 0 7 6
NEDDYLATION 0 903 0 903 75
SUMOYLATION 0 2,315 0 2,315 325
UBIQUITINATION 0 9,993 0 9,993 3,049
COMBINED 0 13,877 0 10,253 3,332
Human Herpesvirus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 3 0 3 4
COMBINED 0 4 0 3 5
Human Herpesvirus 4 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 1 0 1 1
COMBINED 0 2 0 1 1
Human Herpesvirus 6A SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Human Immunodeficiency Virus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 6 0 6 18
COMBINED 0 7 0 6 18
Macaca mulatta UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Mus musculus NEDDYLATION 0 5 0 5 3
SUMOYLATION 0 19 0 19 18
UBIQUITINATION 0 200 0 200 225
UFMYLATION 0 10 0 10 1
COMBINED 0 234 0 226 243
Rattus norvegicus NEDDYLATION 0 1 0 1 1
SUMOYLATION 0 5 0 5 5
UBIQUITINATION 0 34 0 34 33
COMBINED 0 40 0 38 37
Saccharomyces cerevisiae (S288c) NEDDYLATION 0 4 0 4 9
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 818 0 818 66
UBIQUITINATION 0 3,561 0 3,561 212
COMBINED 19,981 4,383 3,165 4,443 798
Schizosaccharomyces pombe (972h) UBIQUITINATION 0 4 0 4 3
COMBINED 0 4 0 4 3
Xenopus laevis UBIQUITINATION 0 2 0 2 2
COMBINED 0 2 0 2 2
All Organisms FAT10YLATION 0 659 0 659 5
ISG15YLATION 0 7 0 7 6
NEDDYLATION 0 915 0 915 82
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 3,167 0 3,167 405
UBIQUITINATION 0 13,820 0 13,820 3,444
UFMYLATION 0 10 0 10 1
COMBINED 19,981 18,578 3,165 14,999 4,317

View the Current Database Statistics

 
build_3.4.129.txt · Last modified: 2016/10/13 22:59 (external edit)