Build Statistics (3.4.127) - August 2015

This page shows the statistics for the BioGRID database as was established via the above referenced data and release version. If you are interested in accessing the data from this exact build, please visit our download page and find the correct version under “Release Archive”. It is highly recommended that all new projects use the latest BioGRID release when possible.

  • Raw Interactions - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice.
  • Non-Redundant Interactions - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication.

Physical and Genetic Interaction Statistics

Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications
Anopheles gambiae (PEST) PHYSICAL 2 1 2 2
GENETIC 0 0 0 0
COMBINED 2 1 2 2
Apis mellifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Arabidopsis thaliana (Columbia) PHYSICAL 26,900 21,650 8,216 1,811
GENETIC 219 158 147 83
COMBINED 27,119 21,776 8,256 1,870
Bacillus subtilis (168) PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Bos taurus PHYSICAL 407 368 397 158
GENETIC 0 0 0 0
COMBINED 407 368 397 158
Caenorhabditis elegans PHYSICAL 6,318 5,783 3,269 184
GENETIC 2,324 2,258 1,120 30
COMBINED 8,642 8,018 3,941 198
Candida albicans (SC5314) PHYSICAL 144 111 125 36
GENETIC 268 263 266 7
COMBINED 412 373 370 42
Canis familiaris PHYSICAL 38 28 45 21
GENETIC 0 0 0 0
COMBINED 38 28 45 21
Cavia porcellus PHYSICAL 6 4 7 4
GENETIC 0 0 0 0
COMBINED 6 4 7 4
Chlamydomonas reinhardtii PHYSICAL 15 14 16 3
GENETIC 0 0 0 0
COMBINED 15 14 16 3
Chlorocebus sabaeus PHYSICAL 4 3 4 1
GENETIC 0 0 0 0
COMBINED 4 3 4 1
Cricetulus griseus PHYSICAL 6 6 11 5
GENETIC 0 0 0 0
COMBINED 6 6 11 5
Danio rerio PHYSICAL 214 188 181 33
GENETIC 70 64 65 30
COMBINED 284 249 239 62
Dictyostelium discoideum (AX4) PHYSICAL 24 17 20 7
GENETIC 6 6 8 2
COMBINED 30 20 24 8
Drosophila melanogaster PHYSICAL 37,757 36,709 8,065 429
GENETIC 9,978 2,823 1,039 1,482
COMBINED 47,735 39,383 8,212 1,854
Emericella nidulans (FGSC A4) PHYSICAL 65 57 57 3
GENETIC 6 5 7 3
COMBINED 71 62 64 6
Equus caballus PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Escherichia coli (K12/MG1655) PHYSICAL 102 99 104 14
GENETIC 26 25 36 12
COMBINED 128 123 138 26
Escherichia coli (K12/W3110) PHYSICAL 6 3 4 2
GENETIC 0 0 0 0
COMBINED 6 3 4 2
Gallus gallus PHYSICAL 401 339 329 69
GENETIC 9 6 10 7
COMBINED 410 344 336 75
Glycine max PHYSICAL 23 20 22 4
GENETIC 0 0 0 0
COMBINED 23 20 22 4
Hepatitus C Virus PHYSICAL 164 110 112 24
GENETIC 0 0 0 0
COMBINED 164 110 112 24
Homo sapiens PHYSICAL 287,264 214,990 19,889 24,151
GENETIC 872 835 868 280
COMBINED 288,136 215,572 20,162 24,248
Human Herpesvirus 1 PHYSICAL 177 134 134 37
GENETIC 6 6 7 1
COMBINED 183 139 139 37
Human Herpesvirus 2 PHYSICAL 4 3 5 3
GENETIC 0 0 0 0
COMBINED 4 3 5 3
Human Herpesvirus 3 PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human Herpesvirus 4 PHYSICAL 295 217 223 33
GENETIC 0 0 0 0
COMBINED 295 217 223 33
Human Herpesvirus 5 PHYSICAL 79 61 71 15
GENETIC 0 0 0 0
COMBINED 79 61 71 15
Human Herpesvirus 6A PHYSICAL 6 4 6 4
GENETIC 0 0 0 0
COMBINED 6 4 6 4
Human Herpesvirus 6B PHYSICAL 2 2 4 2
GENETIC 0 0 0 0
COMBINED 2 2 4 2
Human Herpesvirus 8 PHYSICAL 191 142 140 25
GENETIC 0 0 0 0
COMBINED 191 142 140 25
Human Immunodeficiency Virus 1 PHYSICAL 1,785 1,187 1,028 300
GENETIC 1 1 2 1
COMBINED 1,786 1,187 1,028 301
Human Immunodeficiency Virus 2 PHYSICAL 19 12 16 10
GENETIC 0 0 0 0
COMBINED 19 12 16 10
Human papillomavirus (16) PHYSICAL 5 4 5 1
GENETIC 0 0 0 0
COMBINED 5 4 5 1
Macaca mulatta PHYSICAL 20 11 13 11
GENETIC 0 0 0 0
COMBINED 20 11 13 11
Meleagris gallopavo PHYSICAL 2 2 2 1
GENETIC 0 0 0 0
COMBINED 2 2 2 1
Mus musculus PHYSICAL 22,390 18,067 8,467 3,350
GENETIC 306 264 272 172
COMBINED 22,696 18,261 8,524 3,469
Neurospora crassa (OR74A) PHYSICAL 11 10 12 2
GENETIC 0 0 0 0
COMBINED 11 10 12 2
Oryctolagus cuniculus PHYSICAL 201 175 185 38
GENETIC 0 0 0 0
COMBINED 201 175 185 38
Oryza sativa (Japonica) PHYSICAL 19 15 18 6
GENETIC 0 0 0 0
COMBINED 19 15 18 6
Pan troglodytes PHYSICAL 5 4 8 4
GENETIC 0 0 0 0
COMBINED 5 4 8 4
Plasmodium falciparum (3D7) PHYSICAL 2,545 2,508 1,227 5
GENETIC 0 0 0 0
COMBINED 2,545 2,508 1,227 5
Rattus norvegicus PHYSICAL 5,345 4,495 3,308 931
GENETIC 18 18 29 11
COMBINED 5,363 4,505 3,318 934
Ricinus communis PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Saccharomyces cerevisiae (S288c) PHYSICAL 124,962 80,831 6,259 7,737
GENETIC 209,538 151,185 5,696 7,548
COMBINED 334,500 225,345 6,495 12,937
Schizosaccharomyces pombe (972h) PHYSICAL 10,062 7,261 2,382 1,202
GENETIC 57,733 48,922 3,197 1,427
COMBINED 67,795 55,428 3,964 2,084
Simian Immunodeficiency Virus PHYSICAL 27 14 17 11
GENETIC 0 0 0 0
COMBINED 27 14 17 11
Solanum lycopersicum PHYSICAL 86 75 25 3
GENETIC 0 0 0 0
COMBINED 86 75 25 3
Solanum tuberosum PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Strongylocentrotus purpuratus PHYSICAL 15 15 16 1
GENETIC 0 0 0 0
COMBINED 15 15 16 1
Sus scrofa PHYSICAL 76 72 89 26
GENETIC 0 0 0 0
COMBINED 76 72 89 26
Tobacco Mosaic Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Ustilago maydis (521) PHYSICAL 3 3 3 3
GENETIC 1 1 2 1
COMBINED 4 4 4 4
Vaccinia Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Xenopus laevis PHYSICAL 679 531 470 196
GENETIC 7 7 10 3
COMBINED 686 538 480 199
Zea mays PHYSICAL 9 8 13 5
GENETIC 0 0 0 0
COMBINED 9 8 13 5
All Organisms PHYSICAL 515,887 385,285 54,882 37,261
GENETIC 280,880 206,356 12,193 10,933
COMBINED 796,767 583,703 57,816 44,958

Chemical Interaction Statistics

Organism Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications Unique Chemicals
Bacillus subtilis (168) 163 83 48 13 78
Caenorhabditis elegans 8 4 4 2 1
Candida albicans (SC5314) 108 25 7 50 24
Escherichia coli (K12/MG1655) 1,581 826 289 136 582
Homo sapiens 25,067 10,365 2,105 8,631 4,358
Human Herpesvirus 1 27 7 2 16 7
Human Herpesvirus 4 10 3 3 6 3
Human Immunodeficiency Virus 1 59 10 1 44 10
Mus musculus 2 1 1 2 1
Mycoplasma pneumoniae (M129) 2 1 1 2 1
Plasmodium falciparum (3D7) 4 1 1 4 1
Rattus norvegicus 2 2 1 2 2
Saccharomyces cerevisiae (S288c) 1 1 1 1 1
All Organisms 27,034 11,329 2,464 8,875 4,851

Post Translational Modification (PTM) Statistics

Organism PTM Sites Un-assigned Sites Unique Proteins Unique Genes Unique Publications
Arabidopsis thaliana (Columbia) UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Bos taurus SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 1 0 1 1
COMBINED 0 3 0 3 3
Caenorhabditis elegans SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Cricetulus griseus UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Danio rerio SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 4 0 4 3
COMBINED 0 5 0 5 4
Drosophila melanogaster NEDDYLATION 0 2 0 2 1
SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 7 0 7 4
COMBINED 0 11 0 9 6
Hepatitus C Virus UBIQUITINATION 0 1 0 1 2
COMBINED 0 1 0 1 2
Homo sapiens FAT10YLATION 0 659 0 659 5
ISG15YLATION 0 7 0 7 6
NEDDYLATION 0 903 0 903 75
SUMOYLATION 0 2,315 0 2,315 325
UBIQUITINATION 0 9,993 0 9,993 3,049
COMBINED 0 13,877 0 10,253 3,332
Human Herpesvirus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 3 0 3 4
COMBINED 0 4 0 3 5
Human Herpesvirus 4 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 1 0 1 1
COMBINED 0 2 0 1 1
Human Herpesvirus 6A SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Human Immunodeficiency Virus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 6 0 6 18
COMBINED 0 7 0 6 18
Macaca mulatta UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Mus musculus NEDDYLATION 0 5 0 5 3
SUMOYLATION 0 19 0 19 18
UBIQUITINATION 0 200 0 200 225
UFMYLATION 0 10 0 10 1
COMBINED 0 234 0 226 243
Rattus norvegicus NEDDYLATION 0 1 0 1 1
SUMOYLATION 0 5 0 5 5
UBIQUITINATION 0 34 0 34 33
COMBINED 0 40 0 38 37
Saccharomyces cerevisiae (S288c) NEDDYLATION 0 4 0 4 9
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 818 0 818 66
UBIQUITINATION 0 3,561 0 3,561 212
COMBINED 19,981 4,383 3,165 4,443 798
Schizosaccharomyces pombe (972h) UBIQUITINATION 0 4 0 4 3
COMBINED 0 4 0 4 3
Xenopus laevis UBIQUITINATION 0 2 0 2 2
COMBINED 0 2 0 2 2
All Organisms FAT10YLATION 0 659 0 659 5
ISG15YLATION 0 7 0 7 6
NEDDYLATION 0 915 0 915 82
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 3,167 0 3,167 405
UBIQUITINATION 0 13,820 0 13,820 3,444
UFMYLATION 0 10 0 10 1
COMBINED 19,981 18,578 3,165 14,999 4,317

View the Current Database Statistics

 
build_3.4.127.txt · Last modified: 2016/10/13 22:59 (external edit)