High Throughput Publications in BioGRID
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| - | All papers in biogrid with >100 interaction evidences are described in the table below. Publications which have provided confidence scores or quantifiers for their interactions which have been loaded into BioGRID are indicated in the 'Score' column. For some publications, only a subset of all possible interactions have been loaded into BioGRID, based on a score cut-off suggested by the publication or authors. This cut-off is described in the 'Comments' column. | + | Publications in biogrid with more than 100 interaction evidences are described in the table below. Those which have provided confidence scores or quantifiers for their interactions which have been loaded into BioGRID are indicated in the 'Score' column. For some publications, only a subset of all possible interactions have been loaded, based on a score cut-off suggested by the publication or authors. Where known this cut-off is described in the 'Comments' column. |
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| |18627629|Logan|2008|S.cerevisiae|114 Synthetic Lethality; 110 Synthetic Growth Defect|No| | | |18627629|Logan|2008|S.cerevisiae|114 Synthetic Lethality; 110 Synthetic Growth Defect|No| | | ||
| |18667435|Colomina|2008|S.cerevisiae|317 Protein-RNA|No| | | |18667435|Colomina|2008|S.cerevisiae|317 Protein-RNA|No| | | ||
| - | |18676811|Lin|2008|S.cerevisiae|772 Synthetic Lethality; 1720 Synthetic Growth Defect; 102 Synthetic Rescue|No| | + | |18676811|Lin|2008|S.cerevisiae|772 Synthetic Lethality; 1720 Synthetic Growth Defect; 102 Synthetic Rescue|No| | |
| |18719252|Yu|2008|S.cerevisiae|1778 Two-hybrid|No| | | |18719252|Yu|2008|S.cerevisiae|1778 Two-hybrid|No| | | ||
| |18780730|Sinha|2008|S.cerevisiae|988 Synthetic Growth Defect|No| | | |18780730|Sinha|2008|S.cerevisiae|988 Synthetic Growth Defect|No| | | ||
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| |19061648|Wilmes|2008|S.cerevisiae|3803 Phenotypic Enhancement;2655 Phenotypic Suppression|Yes| | | |19061648|Wilmes|2008|S.cerevisiae|3803 Phenotypic Enhancement;2655 Phenotypic Suppression|Yes| | | ||
| |19269370|Fiedler|2009|S.cerevisiae|2642 Phenotypic Enhancement;1409 Phenotypic Suppression|Yes| | | |19269370|Fiedler|2009|S.cerevisiae|2642 Phenotypic Enhancement;1409 Phenotypic Suppression|Yes| | | ||
| - | |19536198|Gong|2009|S.cerevisiae|1420 Affinity Capture-MS|Yes| | | + | |19536198|Gong|2009|S.cerevisiae|1420 Affinity Capture-MS|Yes|The authors note that 21,687 interactions were identified as high confidence based on experimental scores and the distribution of scores in reference databases. Only 1420 high confidence interactions were submitted to BioGRID by the authors because they met the additional criteria of containing reciprocal interactors in terms of the bait-prey relationship. | |
| |18818364|Roguev|2008|S.pombe|5769 Phenotypic Enhancement;1811 Phenotypic Suppression|Yes| | | |18818364|Roguev|2008|S.pombe|5769 Phenotypic Enhancement;1811 Phenotypic Suppression|Yes| | | ||
| |18931302|Dixon|2008|S.pombe|670 Synthetic Growth Defect|No| | | |18931302|Dixon|2008|S.pombe|670 Synthetic Growth Defect|No| | | ||
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| |16169070|Stelzl|2005|H.sapiens|2527 Two-hybrid |No|Interactions described by author as Medium and High quality were loaded| | |16169070|Stelzl|2005|H.sapiens|2527 Two-hybrid |No|Interactions described by author as Medium and High quality were loaded| | ||
| |16189514|Rual|2005|H.sapiens|2744 Two-hybrid; 111 Affinity Capture-Western|No| | | |16189514|Rual|2005|H.sapiens|2744 Two-hybrid; 111 Affinity Capture-Western|No| | | ||
| - | |17353931|Ewing|2007|H.sapiens|2068 Two-hybrid|Yes|What was the confidence score cut-off?| | + | |17353931|Ewing|2007|H.sapiens|2068 Two-hybrid|Yes| | |
| |18782753|Goudreault|2009|H.sapiens|288 Affinity Capture-MS ; 20 Affinity Capture-Western|No| | | |18782753|Goudreault|2009|H.sapiens|288 Affinity Capture-MS ; 20 Affinity Capture-Western|No| | | ||
| - | |19690564|van Wijk|2009|H.sapiens|346 Two-hybrid|No|LL set identified by authors as hi confidence| | + | |19690564|van Wijk|2009|H.sapiens|346 Two-hybrid|No|LL set identified by authors as high confidence| |
| - | |19549727|Markson|2009|H.sapiens|557 Two-hybrid|Yes|Interactions with scores 4 and 5 identified by authors as hi confidence| | + | |19549727|Markson|2009|H.sapiens|557 Two-hybrid|Yes|Interactions with scores 4 and 5 identified by authors as high confidence| |
| + | |20098747|Fenner|2010|H.sapiens|108 Reconstituted Complex; 6 Two-hybrid; 6 Affinity Capture-Western|No| | | ||