BioGRID Database Statistics
Differences
This shows you the differences between two versions of the page.
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statistics [2020/08/01 00:50] biogridadmin |
statistics [2020/09/30 22:55] biogridadmin |
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| * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | ||
| * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | ||
| - | ====== Current Build Statistics (3.5.188) - August 2020 ====== | + | ====== Current Build Statistics (4.1.190) - October 2020 ====== |
| - | + | ||
| ===== Physical and Genetic Interaction Statistics ===== | ===== Physical and Genetic Interaction Statistics ===== | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,848 | 48,786 | 10,500 | 2,304 | | + | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 58,424 | 50,756 | 10,737 | 2,307 | |
| - | | ::: | GENETIC | 350 | 282 | 304 | 154 | | + | | ::: | GENETIC | 351 | 283 | 306 | 155 | |
| - | | ::: | COMBINED | 56,198 | 48,981 | 10,550 | 2,384 | | + | | ::: | COMBINED | 58,775 | 50,952 | 10,787 | 2,387 | |
| | **//Bacillus subtilis (168)//** | PHYSICAL | 18 | 11 | 9 | 4 | | | **//Bacillus subtilis (168)//** | PHYSICAL | 18 | 11 | 9 | 4 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 11 | 9 | 4 | | | ::: | COMBINED | 18 | 11 | 9 | 4 | | ||
| - | | **//Bos taurus//** | PHYSICAL | 606 | 541 | 559 | 207 | | + | | **//Bos taurus//** | PHYSICAL | 617 | 550 | 566 | 211 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 606 | 541 | 559 | 207 | | + | | ::: | COMBINED | 617 | 550 | 566 | 211 | |
| - | | **//Caenorhabditis elegans//** | PHYSICAL | 20,124 | 19,477 | 5,405 | 205 | | + | | **//Caenorhabditis elegans//** | PHYSICAL | 27,225 | 26,119 | 6,804 | 207 | |
| - | | ::: | GENETIC | 2,338 | 2,271 | 1,133 | 35 | | + | | ::: | GENETIC | 2,344 | 2,277 | 1,136 | 36 | |
| - | | ::: | COMBINED | 22,462 | 21,711 | 5,858 | 223 | | + | | ::: | COMBINED | 29,569 | 28,353 | 7,164 | 226 | |
| | **//Candida albicans (SC5314)//** | PHYSICAL | 1,554 | 1,325 | 945 | 171 | | | **//Candida albicans (SC5314)//** | PHYSICAL | 1,554 | 1,325 | 945 | 171 | | ||
| | ::: | GENETIC | 527 | 450 | 369 | 35 | | | ::: | GENETIC | 527 | 450 | 369 | 35 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 17 | 16 | 19 | 4 | | | ::: | COMBINED | 17 | 16 | 19 | 4 | | ||
| - | | **//Chlorocebus sabaeus//** | PHYSICAL | 20 | 18 | 23 | 9 | | + | | **//Chlorocebus sabaeus//** | PHYSICAL | 21 | 19 | 25 | 10 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 20 | 18 | 23 | 9 | | + | | ::: | COMBINED | 21 | 19 | 25 | 10 | |
| | **//Cricetulus griseus//** | PHYSICAL | 63 | 61 | 77 | 16 | | | **//Cricetulus griseus//** | PHYSICAL | 63 | 61 | 77 | 16 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 71 | 65 | 66 | 31 | | | ::: | GENETIC | 71 | 65 | 66 | 31 | | ||
| | ::: | COMBINED | 320 | 273 | 265 | 72 | | | ::: | COMBINED | 320 | 273 | 265 | 72 | | ||
| - | | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 33 | 20 | 25 | 9 | | + | | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 78 | 65 | 71 | 10 | |
| | ::: | GENETIC | 6 | 6 | 8 | 2 | | | ::: | GENETIC | 6 | 6 | 8 | 2 | | ||
| - | | ::: | COMBINED | 39 | 23 | 29 | 10 | | + | | ::: | COMBINED | 84 | 68 | 75 | 11 | |
| - | | **//Drosophila melanogaster//** | PHYSICAL | 62,367 | 52,558 | 9,158 | 3,696 | | + | | **//Drosophila melanogaster//** | PHYSICAL | 64,404 | 54,507 | 9,226 | 3,697 | |
| | ::: | GENETIC | 14,476 | 10,141 | 3,147 | 4,395 | | | ::: | GENETIC | 14,476 | 10,141 | 3,147 | 4,395 | | ||
| - | | ::: | COMBINED | 76,843 | 61,346 | 9,495 | 7,165 | | + | | ::: | COMBINED | 78,880 | 63,290 | 9,546 | 7,166 | |
| | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | ||
| | ::: | GENETIC | 6 | 5 | 7 | 3 | | | ::: | GENETIC | 6 | 5 | 7 | 3 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Gallus gallus//** | PHYSICAL | 518 | 441 | 417 | 102 | | + | | **//Gallus gallus//** | PHYSICAL | 522 | 443 | 419 | 104 | |
| | ::: | GENETIC | 13 | 10 | 15 | 10 | | | ::: | GENETIC | 13 | 10 | 15 | 10 | | ||
| - | | ::: | COMBINED | 531 | 450 | 425 | 111 | | + | | ::: | COMBINED | 535 | 452 | 427 | 113 | |
| | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 594 | 484 | 486 | 50 | | | ::: | COMBINED | 594 | 484 | 486 | 50 | | ||
| - | | **//Homo sapiens//** | PHYSICAL | 630,620 | 479,615 | 25,514 | 31,882 | | + | | **//Homo sapiens//** | PHYSICAL | 663,179 | 506,159 | 25,722 | 32,168 | |
| - | | ::: | GENETIC | 9,122 | 8,996 | 3,732 | 349 | | + | | ::: | GENETIC | 9,181 | 9,055 | 3,767 | 351 | |
| - | | ::: | COMBINED | 639,742 | 487,903 | 25,927 | 32,022 | | + | | ::: | COMBINED | 672,360 | 514,501 | 26,126 | 32,310 | |
| | **//Human Herpesvirus 1//** | PHYSICAL | 269 | 208 | 174 | 50 | | | **//Human Herpesvirus 1//** | PHYSICAL | 269 | 208 | 174 | 50 | | ||
| | ::: | GENETIC | 6 | 6 | 7 | 1 | | | ::: | GENETIC | 6 | 6 | 7 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 3 | 6 | 3 | | | ::: | COMBINED | 5 | 3 | 6 | 3 | | ||
| - | | **//Human Herpesvirus 4//** | PHYSICAL | 432 | 326 | 323 | 48 | | + | | **//Human Herpesvirus 4//** | PHYSICAL | 436 | 327 | 324 | 49 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 432 | 326 | 323 | 48 | | + | | ::: | COMBINED | 436 | 327 | 324 | 49 | |
| | **//Human Herpesvirus 5//** | PHYSICAL | 157 | 111 | 124 | 29 | | | **//Human Herpesvirus 5//** | PHYSICAL | 157 | 111 | 124 | 29 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Human Herpesvirus 8//** | PHYSICAL | 779 | 693 | 716 | 42 | | + | | **//Human Herpesvirus 8//** | PHYSICAL | 862 | 763 | 778 | 44 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 779 | 693 | 716 | 42 | | + | | ::: | COMBINED | 862 | 763 | 778 | 44 | |
| - | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 2,071 | 1,344 | 1,148 | 368 | | + | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 2,075 | 1,346 | 1,150 | 370 | |
| | ::: | GENETIC | 1 | 1 | 2 | 1 | | | ::: | GENETIC | 1 | 1 | 2 | 1 | | ||
| - | | ::: | COMBINED | 2,072 | 1,344 | 1,148 | 369 | | + | | ::: | COMBINED | 2,076 | 1,346 | 1,150 | 371 | |
| | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 89 | 80 | 63 | 13 | | | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 89 | 80 | 63 | 13 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 4 | 2 | 3 | 1 | | | ::: | COMBINED | 4 | 2 | 3 | 1 | | ||
| - | | **//Mus musculus//** | PHYSICAL | 80,169 | 72,743 | 15,967 | 4,184 | | + | | **//Mus musculus//** | PHYSICAL | 80,510 | 72,965 | 15,990 | 4,213 | |
| - | | ::: | GENETIC | 388 | 343 | 348 | 197 | | + | | ::: | GENETIC | 394 | 349 | 355 | 198 | |
| - | | ::: | COMBINED | 80,557 | 73,008 | 16,010 | 4,322 | | + | | ::: | COMBINED | 80,904 | 73,236 | 16,039 | 4,351 | |
| | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 17 | 13 | 17 | 6 | | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 17 | 13 | 17 | 6 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 3 | 2 | 2 | 1 | | | ::: | COMBINED | 3 | 2 | 2 | 1 | | ||
| - | | **//Oryctolagus cuniculus//** | PHYSICAL | 365 | 322 | 332 | 68 | | + | | **//Oryctolagus cuniculus//** | PHYSICAL | 369 | 326 | 337 | 69 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 365 | 322 | 332 | 68 | | + | | ::: | COMBINED | 369 | 326 | 337 | 69 | |
| | **//Oryza sativa (Japonica)//** | PHYSICAL | 346 | 330 | 314 | 21 | | | **//Oryza sativa (Japonica)//** | PHYSICAL | 346 | 330 | 314 | 21 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2,551 | 2,510 | 1,230 | 6 | | | ::: | COMBINED | 2,551 | 2,510 | 1,230 | 6 | | ||
| - | | **//Rattus norvegicus//** | PHYSICAL | 8,588 | 7,300 | 4,412 | 1,259 | | + | | **//Rattus norvegicus//** | PHYSICAL | 8,674 | 7,364 | 4,438 | 1,277 | |
| | ::: | GENETIC | 19 | 19 | 31 | 12 | | | ::: | GENETIC | 19 | 19 | 31 | 12 | | ||
| - | | ::: | COMBINED | 8,607 | 7,310 | 4,422 | 1,262 | | + | | ::: | COMBINED | 8,693 | 7,374 | 4,448 | 1,280 | |
| | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 2 | 3 | 2 | | | ::: | COMBINED | 5 | 2 | 3 | 2 | | ||
| - | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 174,853 | 116,433 | 7,076 | 9,664 | | + | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 175,968 | 117,040 | 7,077 | 9,699 | |
| - | | ::: | GENETIC | 578,253 | 442,303 | 5,962 | 9,363 | | + | | ::: | GENETIC | 579,323 | 443,268 | 5,962 | 9,392 | |
| - | | ::: | COMBINED | 753,106 | 545,075 | 7,331 | 15,984 | | + | | ::: | COMBINED | 755,291 | 546,582 | 7,332 | 16,037 | |
| - | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 17,552 | 13,121 | 3,571 | 1,625 | | + | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 17,529 | 13,109 | 3,571 | 1,624 | |
| - | | ::: | GENETIC | 62,315 | 52,449 | 3,627 | 2,004 | | + | | ::: | GENETIC | 62,313 | 52,449 | 3,627 | 2,003 | |
| - | | ::: | COMBINED | 79,867 | 64,428 | 4,651 | 2,875 | | + | | ::: | COMBINED | 79,842 | 64,418 | 4,651 | 2,874 | |
| | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
| | ::: | COMBINED | 10 | 8 | 6 | 1 | | | ::: | COMBINED | 10 | 8 | 6 | 1 | | ||
| - | | **//Severe acute respiratory syndrome coronavirus//** | PHYSICAL | 1,196 | 986 | 765 | 96 | | + | | **//Severe acute respiratory syndrome coronavirus//** | PHYSICAL | 1,227 | 1,012 | 786 | 100 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 1,196 | 986 | 765 | 96 | | + | | ::: | COMBINED | 1,227 | 1,012 | 786 | 100 | |
| - | | **//Severe acute respiratory syndrome coronavirus 2//** | PHYSICAL | 2,177 | 2,072 | 1,403 | 45 | | + | | **//Severe acute respiratory syndrome coronavirus 2//** | PHYSICAL | 19,112 | 15,039 | 4,401 | 110 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 2,177 | 2,072 | 1,403 | 45 | | + | | ::: | COMBINED | 19,112 | 15,039 | 4,401 | 110 | |
| - | | **//Simian Immunodeficiency Virus//** | PHYSICAL | 34 | 16 | 19 | 16 | | + | | **//Simian Immunodeficiency Virus//** | PHYSICAL | 35 | 17 | 20 | 17 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 34 | 16 | 19 | 16 | | + | | ::: | COMBINED | 35 | 17 | 20 | 17 | |
| | **//Simian Virus 40//** | PHYSICAL | 12 | 5 | 6 | 8 | | | **//Simian Virus 40//** | PHYSICAL | 12 | 5 | 6 | 8 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 17 | 16 | 17 | 3 | | | ::: | COMBINED | 17 | 16 | 17 | 3 | | ||
| - | | **//Sus scrofa//** | PHYSICAL | 94 | 88 | 106 | 35 | | + | | **//Sus scrofa//** | PHYSICAL | 95 | 89 | 108 | 36 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 94 | 88 | 106 | 35 | | + | | ::: | COMBINED | 95 | 89 | 108 | 36 | |
| | **//Tobacco Mosaic Virus//** | PHYSICAL | 3 | 2 | 3 | 1 | | | **//Tobacco Mosaic Virus//** | PHYSICAL | 3 | 2 | 3 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 13 | 21 | 9 | | | ::: | COMBINED | 18 | 13 | 21 | 9 | | ||
| - | | **//All Organisms//** | PHYSICAL | 1,042,846 | 803,756 | 74,734 | 51,429 | | + | | **//All Organisms//** | PHYSICAL | 1,088,662 | 841,748 | 76,711 | 51,784 | |
| - | | ::: | GENETIC | 838,577 | 686,436 | 22,151 | 16,416 | | + | | ::: | GENETIC | 839,711 | 687,467 | 22,191 | 16,448 | |
| - | | ::: | COMBINED | 1,881,423 | 1,472,343 | 79,326 | 62,708 | | + | | ::: | COMBINED | 1,928,373 | 1,511,287 | 81,183 | 63,083 | |
| ===== Chemical Interaction Statistics ===== | ===== Chemical Interaction Statistics ===== | ||
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| | **//Escherichia coli (K12)//** | 5 | 2 | 2 | 3 | 2 | | | **//Escherichia coli (K12)//** | 5 | 2 | 2 | 3 | 2 | | ||
| | **//Escherichia coli (K12/MG1655)//** | 1,590 | 834 | 287 | 137 | 583 | | | **//Escherichia coli (K12/MG1655)//** | 1,590 | 834 | 287 | 137 | 583 | | ||
| - | | **//Homo sapiens//** | 25,841 | 10,854 | 2,183 | 8,944 | 4,593 | | + | | **//Homo sapiens//** | 26,127 | 11,040 | 2,206 | 9,084 | 4,759 | |
| | **//Human Herpesvirus 1//** | 65 | 24 | 3 | 24 | 21 | | | **//Human Herpesvirus 1//** | 65 | 24 | 3 | 24 | 21 | | ||
| | **//Human Herpesvirus 4//** | 10 | 3 | 3 | 6 | 3 | | | **//Human Herpesvirus 4//** | 10 | 3 | 3 | 6 | 3 | | ||
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| | **//Synechococcus elongatus (PCC6301)//** | 4 | 2 | 1 | 2 | 2 | | | **//Synechococcus elongatus (PCC6301)//** | 4 | 2 | 1 | 2 | 2 | | ||
| | **//Vaccinia Virus//** | 21 | 11 | 2 | 3 | 11 | | | **//Vaccinia Virus//** | 21 | 11 | 2 | 3 | 11 | | ||
| - | | **//All Organisms//** | 28,093 | 12,015 | 2,572 | 9,219 | 5,173 | | + | | **//All Organisms//** | 28,379 | 12,201 | 2,595 | 9,359 | 5,339 | |
| ===== Post Translational Modification (PTM) Statistics ===== | ===== Post Translational Modification (PTM) Statistics ===== | ||
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| ====== Previous Build Statistics ====== | ====== Previous Build Statistics ====== | ||
| ==== 2020 Updates ==== | ==== 2020 Updates ==== | ||
| + | * **[[Build 4.1.190]]** | ||
| + | * **[[Build 4.0.189]]** | ||
| * **[[Build 3.5.188]]** | * **[[Build 3.5.188]]** | ||
| * **[[Build 3.5.187]]** | * **[[Build 3.5.187]]** | ||