BioGRID Database Statistics
Differences
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statistics [2019/11/30 23:49] biogridadmin |
statistics [2024/03/01 01:06] biogridadmin |
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| * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | ||
| * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | ||
| - | ====== Current Build Statistics (3.5.179) - December 2019 ====== | + | ====== Current Build Statistics (4.4.231) - March 2024 ====== |
| ===== Physical and Genetic Interaction Statistics ===== | ===== Physical and Genetic Interaction Statistics ===== | ||
| ^ Organism ^ Experiment Type ^ Raw Interactions ^ Non-Redundant Interactions ^ Unique Genes ^ Unique Publications ^ | ^ Organism ^ Experiment Type ^ Raw Interactions ^ Non-Redundant Interactions ^ Unique Genes ^ Unique Publications ^ | ||
| + | | **//Anas platyrhynchos//** | PHYSICAL | 3 | 3 | 3 | 2 | | ||
| + | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| + | | ::: | COMBINED | 3 | 3 | 3 | 2 | | ||
| | **//Anopheles gambiae (PEST)//** | PHYSICAL | 2 | 1 | 2 | 2 | | | **//Anopheles gambiae (PEST)//** | PHYSICAL | 2 | 1 | 2 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 15: | Line 17: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,848 | 48,786 | 10,500 | 2,304 | | + | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 82,309 | 74,004 | 11,740 | 2,364 | |
| - | | ::: | GENETIC | 350 | 282 | 304 | 154 | | + | | ::: | GENETIC | 362 | 294 | 322 | 164 | |
| - | | ::: | COMBINED | 56,198 | 48,981 | 10,550 | 2,384 | | + | | ::: | COMBINED | 82,671 | 74,205 | 11,787 | 2,445 | |
| | **//Bacillus subtilis (168)//** | PHYSICAL | 18 | 11 | 9 | 4 | | | **//Bacillus subtilis (168)//** | PHYSICAL | 18 | 11 | 9 | 4 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 11 | 9 | 4 | | | ::: | COMBINED | 18 | 11 | 9 | 4 | | ||
| - | | **//Bos taurus//** | PHYSICAL | 482 | 434 | 458 | 194 | | + | | **//Bos taurus//** | PHYSICAL | 649 | 575 | 595 | 226 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 482 | 434 | 458 | 194 | | + | | ::: | COMBINED | 649 | 575 | 595 | 226 | |
| - | | **//Caenorhabditis elegans//** | PHYSICAL | 24,514 | 23,476 | 6,563 | 206 | | + | | **//Caenorhabditis elegans//** | PHYSICAL | 41,432 | 37,770 | 8,668 | 1,519 | |
| - | | ::: | GENETIC | 2,338 | 2,271 | 1,133 | 35 | | + | | ::: | GENETIC | 2,348 | 2,281 | 1,140 | 37 | |
| - | | ::: | COMBINED | 26,852 | 25,704 | 6,942 | 224 | | + | | ::: | COMBINED | 43,780 | 39,997 | 8,869 | 1,539 | |
| - | | **//Candida albicans (SC5314)//** | PHYSICAL | 1,451 | 1,227 | 877 | 167 | | + | | **//Candida albicans (SC5314)//** | PHYSICAL | 1,558 | 1,327 | 948 | 173 | |
| - | | ::: | GENETIC | 527 | 450 | 369 | 35 | | + | | ::: | GENETIC | 531 | 454 | 376 | 39 | |
| - | | ::: | COMBINED | 1,978 | 1,653 | 1,140 | 181 | | + | | ::: | COMBINED | 2,089 | 1,756 | 1,210 | 191 | |
| - | | **//Canis familiaris//** | PHYSICAL | 138 | 126 | 144 | 26 | | + | | **//Canis familiaris//** | PHYSICAL | 558 | 540 | 530 | 34 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 138 | 126 | 144 | 26 | | + | | ::: | COMBINED | 558 | 540 | 530 | 34 | |
| - | | **//Cavia porcellus//** | PHYSICAL | 7 | 5 | 9 | 5 | | + | | **//Cavia porcellus//** | PHYSICAL | 10 | 8 | 14 | 8 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 7 | 5 | 9 | 5 | | + | | ::: | COMBINED | 10 | 8 | 14 | 8 | |
| | **//Chlamydomonas reinhardtii//** | PHYSICAL | 17 | 16 | 19 | 4 | | | **//Chlamydomonas reinhardtii//** | PHYSICAL | 17 | 16 | 19 | 4 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 17 | 16 | 19 | 4 | | | ::: | COMBINED | 17 | 16 | 19 | 4 | | ||
| - | | **//Chlorocebus sabaeus//** | PHYSICAL | 17 | 15 | 18 | 6 | | + | | **//Chlorocebus sabaeus//** | PHYSICAL | 59 | 53 | 75 | 21 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 17 | 15 | 18 | 6 | | + | | ::: | COMBINED | 59 | 53 | 75 | 21 | |
| - | | **//Cricetulus griseus//** | PHYSICAL | 59 | 58 | 71 | 13 | | + | | **//Cricetulus griseus//** | PHYSICAL | 67 | 64 | 80 | 19 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 59 | 58 | 71 | 13 | | + | | ::: | COMBINED | 67 | 64 | 80 | 19 | |
| - | | **//Danio rerio//** | PHYSICAL | 248 | 210 | 207 | 42 | | + | | **//Danio rerio//** | PHYSICAL | 506 | 464 | 461 | 50 | |
| | ::: | GENETIC | 71 | 65 | 66 | 31 | | | ::: | GENETIC | 71 | 65 | 66 | 31 | | ||
| - | | ::: | COMBINED | 319 | 272 | 263 | 71 | | + | | ::: | COMBINED | 577 | 526 | 517 | 79 | |
| - | | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 33 | 20 | 25 | 9 | | + | | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 79 | 66 | 72 | 11 | |
| | ::: | GENETIC | 6 | 6 | 8 | 2 | | | ::: | GENETIC | 6 | 6 | 8 | 2 | | ||
| - | | ::: | COMBINED | 39 | 23 | 29 | 10 | | + | | ::: | COMBINED | 85 | 69 | 76 | 12 | |
| - | | **//Drosophila melanogaster//** | PHYSICAL | 62,215 | 52,407 | 9,007 | 3,690 | | + | | **//Drosophila melanogaster//** | PHYSICAL | 69,520 | 57,781 | 10,333 | 4,368 | |
| - | | ::: | GENETIC | 14,476 | 10,141 | 3,147 | 4,395 | | + | | ::: | GENETIC | 15,348 | 10,764 | 3,294 | 4,640 | |
| - | | ::: | COMBINED | 76,691 | 61,195 | 9,345 | 7,159 | | + | | ::: | COMBINED | 84,868 | 67,080 | 10,671 | 8,040 | |
| | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | ||
| | ::: | GENETIC | 6 | 5 | 7 | 3 | | | ::: | GENETIC | 6 | 5 | 7 | 3 | | ||
| | ::: | COMBINED | 71 | 62 | 64 | 6 | | | ::: | COMBINED | 71 | 62 | 64 | 6 | | ||
| - | | **//Equus caballus//** | PHYSICAL | 2 | 2 | 4 | 2 | | + | | **//Equus caballus//** | PHYSICAL | 4 | 3 | 6 | 4 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 2 | 2 | 4 | 2 | | + | | ::: | COMBINED | 4 | 3 | 6 | 4 | |
| | **//Escherichia coli (K12)//** | PHYSICAL | 1 | 1 | 2 | 1 | | | **//Escherichia coli (K12)//** | PHYSICAL | 1 | 1 | 2 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Escherichia coli (K12/MC4100/BW2952)//** | PHYSICAL | 9 | 9 | 10 | 2 | | + | | **//Escherichia coli (K12/MC4100/BW2952)//** | PHYSICAL | 10 | 10 | 12 | 3 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 9 | 9 | 10 | 2 | | + | | ::: | COMBINED | 10 | 10 | 12 | 3 | |
| - | | **//Escherichia coli (K12/MG1655)//** | PHYSICAL | 2,304 | 2,122 | 1,308 | 29 | | + | | **//Escherichia coli (K12/MG1655)//** | PHYSICAL | 2,288 | 2,104 | 1,287 | 36 | |
| | ::: | GENETIC | 26 | 25 | 36 | 12 | | | ::: | GENETIC | 26 | 25 | 36 | 12 | | ||
| - | | ::: | COMBINED | 2,330 | 2,146 | 1,339 | 41 | | + | | ::: | COMBINED | 2,314 | 2,128 | 1,318 | 48 | |
| | **//Escherichia coli (K12/W3110)//** | PHYSICAL | 12,804 | 12,801 | 2,045 | 3 | | | **//Escherichia coli (K12/W3110)//** | PHYSICAL | 12,804 | 12,801 | 2,045 | 3 | | ||
| - | | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | + | | ::: | GENETIC | 186,493 | 184,791 | 3,980 | 5 | |
| - | | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | + | | ::: | COMBINED | 199,297 | 196,815 | 4,068 | 8 | |
| - | | **//Gallus gallus//** | PHYSICAL | 514 | 437 | 413 | 98 | | + | | **//Felis Catus//** | PHYSICAL | 5 | 1 | 2 | 5 | |
| + | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| + | | ::: | COMBINED | 5 | 1 | 2 | 5 | | ||
| + | | **//Gallus gallus//** | PHYSICAL | 561 | 478 | 452 | 117 | | ||
| | ::: | GENETIC | 13 | 10 | 15 | 10 | | | ::: | GENETIC | 13 | 10 | 15 | 10 | | ||
| - | | ::: | COMBINED | 527 | 446 | 421 | 107 | | + | | ::: | COMBINED | 574 | 487 | 460 | 126 | |
| | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 46 | 40 | 45 | 8 | | | ::: | COMBINED | 46 | 40 | 45 | 8 | | ||
| - | | **//Hepatitus C Virus//** | PHYSICAL | 252 | 175 | 177 | 39 | | + | | **//Hepatitus C Virus//** | PHYSICAL | 613 | 492 | 493 | 57 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 252 | 175 | 177 | 39 | | + | | ::: | COMBINED | 613 | 492 | 493 | 57 | |
| - | | **//Homo sapiens//** | PHYSICAL | 532,149 | 396,398 | 24,195 | 30,601 | | + | | **//Homo sapiens//** | PHYSICAL | 1,278,854 | 970,420 | 28,023 | 38,121 | |
| - | | ::: | GENETIC | 8,979 | 8,856 | 3,618 | 342 | | + | | ::: | GENETIC | 18,966 | 18,476 | 7,441 | 399 | |
| - | | ::: | COMBINED | 541,128 | 404,566 | 24,613 | 30,738 | | + | | ::: | COMBINED | 1,297,820 | 987,179 | 28,463 | 38,294 | |
| - | | **//Human Herpesvirus 1//** | PHYSICAL | 265 | 204 | 173 | 48 | | + | | **//Human Herpesvirus 1//** | PHYSICAL | 326 | 250 | 202 | 71 | |
| | ::: | GENETIC | 6 | 6 | 7 | 1 | | | ::: | GENETIC | 6 | 6 | 7 | 1 | | ||
| - | | ::: | COMBINED | 271 | 209 | 178 | 48 | | + | | ::: | COMBINED | 332 | 255 | 207 | 71 | |
| | **//Human Herpesvirus 2//** | PHYSICAL | 12 | 6 | 10 | 5 | | | **//Human Herpesvirus 2//** | PHYSICAL | 12 | 6 | 10 | 5 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 12 | 6 | 10 | 5 | | | ::: | COMBINED | 12 | 6 | 10 | 5 | | ||
| - | | **//Human Herpesvirus 3//** | PHYSICAL | 5 | 3 | 6 | 3 | | + | | **//Human Herpesvirus 3//** | PHYSICAL | 16 | 12 | 15 | 6 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 5 | 3 | 6 | 3 | | + | | ::: | COMBINED | 16 | 12 | 15 | 6 | |
| - | | **//Human Herpesvirus 4//** | PHYSICAL | 429 | 326 | 323 | 47 | | + | | **//Human Herpesvirus 4//** | PHYSICAL | 680 | 544 | 505 | 59 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 429 | 326 | 323 | 47 | | + | | ::: | COMBINED | 680 | 544 | 505 | 59 | |
| - | | **//Human Herpesvirus 5//** | PHYSICAL | 149 | 108 | 121 | 28 | | + | | **//Human Herpesvirus 5//** | PHYSICAL | 202 | 134 | 146 | 41 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 149 | 108 | 121 | 28 | | + | | ::: | COMBINED | 202 | 134 | 146 | 41 | |
| | **//Human Herpesvirus 6A//** | PHYSICAL | 11 | 8 | 12 | 7 | | | **//Human Herpesvirus 6A//** | PHYSICAL | 11 | 8 | 12 | 7 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Human Herpesvirus 8//** | PHYSICAL | 779 | 693 | 716 | 42 | | + | | **//Human Herpesvirus 8//** | PHYSICAL | 1,011 | 901 | 890 | 49 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 779 | 693 | 716 | 42 | | + | | ::: | COMBINED | 1,011 | 901 | 890 | 49 | |
| - | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 2,042 | 1,331 | 1,141 | 356 | | + | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 2,533 | 1,737 | 1,443 | 401 | |
| | ::: | GENETIC | 1 | 1 | 2 | 1 | | | ::: | GENETIC | 1 | 1 | 2 | 1 | | ||
| - | | ::: | COMBINED | 2,043 | 1,331 | 1,141 | 357 | | + | | ::: | COMBINED | 2,534 | 1,737 | 1,443 | 402 | |
| - | | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 89 | 80 | 63 | 13 | | + | | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 91 | 80 | 63 | 14 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 89 | 80 | 63 | 13 | | + | | ::: | COMBINED | 91 | 80 | 63 | 14 | |
| - | | **//Human papillomavirus (10)//** | PHYSICAL | 1 | 1 | 2 | 1 | | + | | **//Human papillomavirus (10)//** | PHYSICAL | 4 | 3 | 5 | 3 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 1 | 1 | 2 | 1 | | + | | ::: | COMBINED | 4 | 3 | 5 | 3 | |
| - | | **//Human papillomavirus (16)//** | PHYSICAL | 263 | 188 | 175 | 28 | | + | | **//Human papillomavirus (16)//** | PHYSICAL | 660 | 511 | 484 | 41 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 263 | 188 | 175 | 28 | | + | | ::: | COMBINED | 660 | 511 | 484 | 41 | |
| - | | **//Human papillomavirus (6b)//** | PHYSICAL | 20 | 20 | 22 | 2 | | + | | **//Human papillomavirus (32)//** | PHYSICAL | 62 | 58 | 57 | 1 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 20 | 20 | 22 | 2 | | + | | ::: | COMBINED | 62 | 58 | 57 | 1 | |
| - | | **//Leishmania major (Friedlin)//** | PHYSICAL | 1 | 1 | 2 | 1 | | + | | **//Human papillomavirus (5)//** | PHYSICAL | 146 | 132 | 128 | 2 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 1 | 1 | 2 | 1 | | + | | ::: | COMBINED | 146 | 132 | 128 | 2 | |
| - | | **//Macaca mulatta//** | PHYSICAL | 23 | 14 | 17 | 14 | | + | | **//Human papillomavirus (6b)//** | PHYSICAL | 592 | 581 | 459 | 4 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 23 | 14 | 17 | 14 | | + | | ::: | COMBINED | 592 | 581 | 459 | 4 | |
| - | | **//Meleagris gallopavo//** | PHYSICAL | 2 | 2 | 2 | 1 | | + | | **//Human papillomavirus (7)//** | PHYSICAL | 1 | 1 | 2 | 1 | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 2 | 2 | 2 | 1 | | + | |
| - | | **//Mus musculus//** | PHYSICAL | 48,756 | 42,306 | 13,526 | 4,044 | | + | |
| - | | ::: | GENETIC | 385 | 340 | 344 | 196 | | + | |
| - | | ::: | COMBINED | 49,141 | 42,571 | 13,584 | 4,182 | | + | |
| - | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 13 | 11 | 14 | 4 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 13 | 11 | 14 | 4 | | + | |
| - | | **//Neurospora crassa (OR74A)//** | PHYSICAL | 11 | 10 | 12 | 2 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 11 | 10 | 12 | 2 | | + | |
| - | | **//Nicotiana tomentosiformis//** | PHYSICAL | 3 | 2 | 2 | 1 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 3 | 2 | 2 | 1 | | + | |
| - | | **//Oryctolagus cuniculus//** | PHYSICAL | 318 | 284 | 293 | 66 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 318 | 284 | 293 | 66 | | + | |
| - | | **//Oryza sativa (Japonica)//** | PHYSICAL | 346 | 330 | 314 | 21 | | + | |
| - | | ::: | GENETIC | 2 | 2 | 3 | 1 | | + | |
| - | | ::: | COMBINED | 348 | 332 | 314 | 21 | | + | |
| - | | **//Ovis aries//** | PHYSICAL | 1 | 1 | 2 | 1 | | + | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Pan troglodytes//** | PHYSICAL | 6 | 5 | 10 | 5 | | + | | **//Human papillomavirus (9)//** | PHYSICAL | 96 | 87 | 84 | 1 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 6 | 5 | 10 | 5 | | + | | ::: | COMBINED | 96 | 87 | 84 | 1 | |
| - | | **//Pediculus humanus//** | PHYSICAL | 2 | 2 | 3 | 2 | | + | | **//Leishmania major (Friedlin)//** | PHYSICAL | 1 | 1 | 2 | 1 | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 2 | 2 | 3 | 2 | | + | |
| - | | **//Plasmodium falciparum (3D7)//** | PHYSICAL | 2,545 | 2,508 | 1,227 | 5 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | + | |
| - | | **//Rattus norvegicus//** | PHYSICAL | 7,839 | 6,662 | 4,179 | 1,172 | | + | |
| - | | ::: | GENETIC | 19 | 19 | 31 | 12 | | + | |
| - | | ::: | COMBINED | 7,858 | 6,672 | 4,189 | 1,175 | | + | |
| - | | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 5 | 2 | 3 | 2 | | + | |
| - | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 173,765 | 115,774 | 6,921 | 9,546 | | + | |
| - | | ::: | GENETIC | 577,772 | 442,053 | 5,960 | 9,255 | | + | |
| - | | ::: | COMBINED | 751,537 | 544,242 | 7,176 | 15,793 | | + | |
| - | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 17,200 | 12,906 | 3,565 | 1,592 | | + | |
| - | | ::: | GENETIC | 61,678 | 51,981 | 3,563 | 1,951 | | + | |
| - | | ::: | COMBINED | 78,878 | 63,777 | 4,626 | 2,802 | | + | |
| - | | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | + | |
| - | | ::: | GENETIC | 2 | 2 | 3 | 1 | | + | |
| - | | ::: | COMBINED | 10 | 8 | 6 | 1 | | + | |
| - | | **//Simian Immunodeficiency Virus//** | PHYSICAL | 34 | 16 | 19 | 16 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 34 | 16 | 19 | 16 | | + | |
| - | | **//Simian Virus 40//** | PHYSICAL | 11 | 5 | 6 | 7 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 11 | 5 | 6 | 7 | | + | |
| - | | **//Solanum lycopersicum//** | PHYSICAL | 137 | 107 | 44 | 8 | | + | |
| - | | ::: | GENETIC | 4 | 4 | 4 | 1 | | + | |
| - | | ::: | COMBINED | 141 | 109 | 45 | 8 | | + | |
| - | | **//Solanum tuberosum//** | PHYSICAL | 3 | 3 | 5 | 3 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 3 | 3 | 5 | 3 | | + | |
| - | | **//Streptococcus pneumoniae (ATCCBAA255)//** | PHYSICAL | 16 | 9 | 6 | 1 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 16 | 9 | 6 | 1 | | + | |
| - | | **//Strongylocentrotus purpuratus//** | PHYSICAL | 17 | 16 | 17 | 3 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 17 | 16 | 17 | 3 | | + | |
| - | | **//Sus scrofa//** | PHYSICAL | 89 | 83 | 100 | 31 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 89 | 83 | 100 | 31 | | + | |
| - | | **//Tobacco Mosaic Virus//** | PHYSICAL | 3 | 2 | 3 | 1 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 3 | 2 | 3 | 1 | | + | |
| - | | **//Ustilago maydis (521)//** | PHYSICAL | 3 | 3 | 3 | 3 | | + | |
| - | | ::: | GENETIC | 1 | 1 | 2 | 1 | | + | |
| - | | ::: | COMBINED | 4 | 4 | 4 | 4 | | + | |
| - | | **//Vaccinia Virus//** | PHYSICAL | 7 | 6 | 8 | 3 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 7 | 6 | 8 | 3 | | + | |
| - | | **//Vitis vinifera//** | PHYSICAL | 1 | 1 | 2 | 1 | | + | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Xenopus laevis//** | PHYSICAL | 1,412 | 1,248 | 1,144 | 231 | | + | | **//Macaca mulatta//** | PHYSICAL | 316 | 305 | 310 | 19 | |
| - | | ::: | GENETIC | 7 | 7 | 10 | 3 | | + | |
| - | | ::: | COMBINED | 1,419 | 1,255 | 1,154 | 234 | | + | |
| - | | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | + | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 18 | 13 | 21 | 9 | | + | | ::: | COMBINED | 316 | 305 | 310 | 19 | |
| - | | **//All Organisms//** | PHYSICAL | 916,351 | 693,825 | 72,406 | 49,893 | | + | | **//Meleagris gallopavo//** | PHYSICAL | 2 | 2 | 2 | 1 | |
| - | | ::: | GENETIC | 837,335 | 685,594 | 21,983 | 16,251 | | + | |
| - | | ::: | COMBINED | 1,753,686 | 1,361,694 | 76,943 | 61,059 | | + | |
| - | + | ||
| - | ===== Chemical Interaction Statistics ===== | + | |
| - | ^ Organism ^ Raw Interactions ^ Non-Redundant Interactions ^ Unique Genes ^ Unique Publications ^ Unique Chemicals ^ | + | |
| - | | **//Bacillus subtilis (168)//** | 164 | 85 | 49 | 15 | 79 | | + | |
| - | | **//Caenorhabditis elegans//** | 8 | 4 | 4 | 2 | 1 | | + | |
| - | | **//Candida albicans (SC5314)//** | 108 | 25 | 7 | 50 | 24 | | + | |
| - | | **//Escherichia coli (K12)//** | 5 | 2 | 2 | 3 | 2 | | + | |
| - | | **//Escherichia coli (K12/MG1655)//** | 1,590 | 834 | 287 | 137 | 583 | | + | |
| - | | **//Homo sapiens//** | 25,841 | 10,854 | 2,183 | 8,944 | 4,593 | | + | |
| - | | **//Human Herpesvirus 1//** | 65 | 24 | 3 | 24 | 21 | | + | |
| - | | **//Human Herpesvirus 4//** | 10 | 3 | 3 | 6 | 3 | | + | |
| - | | **//Human Immunodeficiency Virus 1//** | 105 | 53 | 2 | 48 | 53 | | + | |
| - | | **//Leishmania major (Friedlin)//** | 8 | 4 | 1 | 2 | 4 | | + | |
| - | | **//Mus musculus//** | 2 | 1 | 1 | 2 | 1 | | + | |
| - | | **//Mycobacterium tuberculosis (CDC1551)//** | 3 | 3 | 3 | 1 | 3 | | + | |
| - | | **//Mycobacterium tuberculosis (H37Rv)//** | 1 | 1 | 1 | 1 | 1 | | + | |
| - | | **//Mycoplasma pneumoniae (M129)//** | 2 | 1 | 1 | 2 | 1 | | + | |
| - | | **//Plasmodium falciparum (3D7)//** | 4 | 1 | 1 | 4 | 1 | | + | |
| - | | **//Rattus norvegicus//** | 2 | 2 | 1 | 2 | 2 | | + | |
| - | | **//Saccharomyces cerevisiae (S288c)//** | 7 | 7 | 2 | 2 | 7 | | + | |
| - | | **//Streptococcus pneumoniae (ATCCBAA255)//** | 82 | 72 | 8 | 11 | 29 | | + | |
| - | | **//Streptococcus pneumoniae (ATCCBAA334)//** | 61 | 26 | 10 | 18 | 19 | | + | |
| - | | **//Synechococcus elongatus (PCC6301)//** | 4 | 2 | 1 | 2 | 2 | | + | |
| - | | **//Vaccinia Virus//** | 21 | 11 | 2 | 3 | 11 | | + | |
| - | | **//All Organisms//** | 28,093 | 12,015 | 2,572 | 9,219 | 5,173 | | + | |
| - | + | ||
| - | ===== Post Translational Modification (PTM) Statistics ===== | + | |
| - | ^ Organism ^ PTM ^ Raw Sites ^ NR Sites ^ Un-assigned Sites ^ Unique Proteins ^ Unique Genes ^ Unique Publications ^ | + | |
| - | | **//Arabidopsis thaliana (Columbia)//** | SUMOYLATION | 0 | 0 | 2 | 0 | 2 | 1 | | + | |
| - | | ::: | UBIQUITINATION | 0 | 0 | 8 | 0 | 8 | 8 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 10 | 0 | 10 | 9 | | + | |
| - | | **//Bos taurus//** | SUMOYLATION | 0 | 0 | 2 | 0 | 2 | 2 | | + | |
| - | | ::: | UBIQUITINATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 3 | 0 | 3 | 3 | | + | |
| - | | **//Caenorhabditis elegans//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | **//Chlorocebus sabaeus//** | UBIQUITINATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | **//Cricetulus griseus//** | UBIQUITINATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | **//Danio rerio//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | UBIQUITINATION | 0 | 0 | 4 | 0 | 4 | 3 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 5 | 0 | 5 | 4 | | + | |
| - | | **//Drosophila melanogaster//** | NEDDYLATION | 0 | 0 | 2 | 0 | 2 | 1 | | + | |
| - | | ::: | SUMOYLATION | 0 | 0 | 2 | 0 | 2 | 2 | | + | |
| - | | ::: | UBIQUITINATION | 0 | 0 | 7 | 0 | 7 | 4 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 11 | 0 | 9 | 6 | | + | |
| - | | **//Gallus gallus//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | UBIQUITINATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 2 | 0 | 1 | 1 | | + | |
| - | | **//Hepatitus C Virus//** | UBIQUITINATION | 0 | 0 | 2 | 0 | 1 | 2 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 2 | 0 | 1 | 2 | | + | |
| - | | **//Homo sapiens//** | ATG12-ATG5 CONJUGATE | 0 | 0 | 2 | 0 | 1 | 2 | | + | |
| - | | ::: | FAT10YLATION | 0 | 0 | 696 | 0 | 659 | 5 | | + | |
| - | | ::: | ISGYLATION | 0 | 0 | 28 | 0 | 28 | 7 | | + | |
| - | | ::: | NEDDYLATION | 0 | 0 | 1,093 | 0 | 903 | 75 | | + | |
| - | | ::: | SUMOYLATION | 0 | 0 | 4,392 | 0 | 2,317 | 330 | | + | |
| - | | ::: | UBIQUITINATION | 705,673 | 383,699 | 39,038 | 54,962 | 11,895 | 3,118 | | + | |
| - | | ::: | COMBINED | 705,673 | 383,699 | 45,249 | 54,962 | 12,022 | 3,408 | | + | |
| - | | **//Human Herpesvirus 1//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | UBIQUITINATION | 0 | 0 | 4 | 0 | 3 | 4 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 5 | 0 | 3 | 5 | | + | |
| - | | **//Human Herpesvirus 4//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | UBIQUITINATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 2 | 0 | 1 | 1 | | + | |
| - | | **//Human Herpesvirus 6A//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | **//Human Herpesvirus 8//** | UBIQUITINATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | **//Human Immunodeficiency Virus 1//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | UBIQUITINATION | 0 | 0 | 18 | 0 | 6 | 18 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 19 | 0 | 6 | 18 | | + | |
| - | | **//Macaca mulatta//** | UBIQUITINATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | **//Mus musculus//** | ATG12-ATG5 CONJUGATE | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | ISGYLATION | 0 | 0 | 43 | 0 | 42 | 2 | | + | |
| - | | ::: | NEDDYLATION | 0 | 0 | 7 | 0 | 6 | 5 | | + | |
| - | | ::: | SUMOYLATION | 0 | 0 | 49 | 0 | 41 | 39 | | + | |
| - | | ::: | UBIQUITINATION | 34,482 | 34,482 | 737 | 13,810 | 3,872 | 444 | | + | |
| - | | ::: | UFMYLATION | 0 | 0 | 10 | 0 | 10 | 1 | | + | |
| - | | ::: | COMBINED | 34,482 | 34,482 | 847 | 13,810 | 3,901 | 484 | | + | |
| - | | **//Rattus norvegicus//** | NEDDYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | + | |
| - | | ::: | SUMOYLATION | 0 | 0 | 6 | 0 | 6 | 6 | | + | |
| - | | ::: | UBIQUITINATION | 0 | 0 | 38 | 0 | 35 | 35 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 45 | 0 | 40 | 40 | | + | |
| - | | **//Saccharomyces cerevisiae (S288c)//** | NEDDYLATION | 0 | 0 | 10 | 0 | 4 | 9 | | + | |
| - | | ::: | PHOSPHORYLATION | 42,907 | 19,981 | 0 | 3,165 | 3,165 | 528 | | + | |
| - | | ::: | SUMOYLATION | 0 | 0 | 1,438 | 0 | 818 | 67 | | + | |
| - | | ::: | UBIQUITINATION | 34,338 | 20,019 | 9,736 | 2,549 | 3,678 | 215 | | + | |
| - | | ::: | COMBINED | 77,245 | 40,000 | 11,184 | 3,918 | 4,499 | 802 | | + | |
| - | | **//Schizosaccharomyces pombe (972h)//** | UBIQUITINATION | 0 | 0 | 4 | 0 | 4 | 3 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 4 | 0 | 4 | 3 | | + | |
| - | | **//Xenopus laevis//** | UBIQUITINATION | 0 | 0 | 2 | 0 | 2 | 2 | | + | |
| - | | ::: | COMBINED | 0 | 0 | 2 | 0 | 2 | 2 | | + | |
| - | | **//All Organisms//** | ATG12-ATG5 CONJUGATE | 0 | 0 | 3 | 0 | 2 | 3 | | + | |
| - | | ::: | FAT10YLATION | 0 | 0 | 696 | 0 | 659 | 5 | | + | |
| - | | ::: | ISGYLATION | 0 | 0 | 71 | 0 | 70 | 8 | | + | |
| - | | ::: | NEDDYLATION | 0 | 0 | 1,113 | 0 | 916 | 84 | | + | |
| - | | ::: | PHOSPHORYLATION | 42,907 | 19,981 | 0 | 3,165 | 3,165 | 528 | | + | |
| - | | ::: | SUMOYLATION | 0 | 0 | 5,898 | 0 | 3,195 | 433 | | + | |
| - | | ::: | UBIQUITINATION | 774,493 | 438,200 | 49,605 | 71,321 | 19,522 | 3,741 | | + | |
| - | | ::: | UFMYLATION | 0 | 0 | 10 | 0 | 10 | 1 | | + | |
| - | | ::: | COMBINED | 817,400 | 458,181 | 57,396 | 72,690 | 20,513 | 4,643 | | + | |
| - | + | ||
| - | ===== Physical and Genetic Interaction Statistics ===== | + | |
| - | ^ Organism ^ Experiment Type ^ Raw Interactions ^ Non-Redundant Interactions ^ Unique Genes ^ Unique Publications ^ | + | |
| - | | **//Anopheles gambiae (PEST)//** | PHYSICAL | 2 | 1 | 2 | 2 | | + | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 2 | 1 | 2 | 2 | | + | | ::: | COMBINED | 2 | 2 | 2 | 1 | |
| - | | **//Apis mellifera//** | PHYSICAL | 1 | 1 | 2 | 1 | | + | | **//Middle-East Respiratory Syndrome-related Coronavirus//** | PHYSICAL | 1,106 | 1,051 | 987 | 64 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 1 | 1 | 2 | 1 | | + | | ::: | COMBINED | 1,106 | 1,051 | 987 | 64 | |
| - | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,848 | 48,786 | 10,500 | 2,304 | | + | | **//Monodelphis domestica//** | PHYSICAL | 4 | 2 | 3 | 1 | |
| - | | ::: | GENETIC | 350 | 282 | 304 | 154 | | + | |
| - | | ::: | COMBINED | 56,198 | 48,981 | 10,550 | 2,384 | | + | |
| - | | **//Bacillus subtilis (168)//** | PHYSICAL | 18 | 11 | 9 | 4 | | + | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 18 | 11 | 9 | 4 | | + | | ::: | COMBINED | 4 | 2 | 3 | 1 | |
| - | | **//Bos taurus//** | PHYSICAL | 482 | 434 | 458 | 194 | | + | | **//Murid Herpesvirus 1//** | PHYSICAL | 2 | 1 | 2 | 1 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 482 | 434 | 458 | 194 | | + | | ::: | COMBINED | 2 | 1 | 2 | 1 | |
| - | | **//Caenorhabditis elegans//** | PHYSICAL | 24,514 | 23,476 | 6,563 | 206 | | + | | **//Mus musculus//** | PHYSICAL | 100,204 | 91,546 | 18,144 | 4,694 | |
| - | | ::: | GENETIC | 2,338 | 2,271 | 1,133 | 35 | | + | | ::: | GENETIC | 938 | 890 | 833 | 209 | |
| - | | ::: | COMBINED | 26,852 | 25,704 | 6,942 | 224 | | + | | ::: | COMBINED | 101,142 | 92,351 | 18,282 | 4,842 | |
| - | | **//Candida albicans (SC5314)//** | PHYSICAL | 1,451 | 1,227 | 877 | 167 | | + | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 24 | 20 | 25 | 7 | |
| - | | ::: | GENETIC | 527 | 450 | 369 | 35 | | + | |
| - | | ::: | COMBINED | 1,978 | 1,653 | 1,140 | 181 | | + | |
| - | | **//Canis familiaris//** | PHYSICAL | 138 | 126 | 144 | 26 | | + | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 138 | 126 | 144 | 26 | | + | | ::: | COMBINED | 24 | 20 | 25 | 7 | |
| - | | **//Cavia porcellus//** | PHYSICAL | 7 | 5 | 9 | 5 | | + | | **//Myotis lucifugus//** | PHYSICAL | 1 | 1 | 2 | 1 | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 7 | 5 | 9 | 5 | | + | |
| - | | **//Chlamydomonas reinhardtii//** | PHYSICAL | 17 | 16 | 19 | 4 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 17 | 16 | 19 | 4 | | + | |
| - | | **//Chlorocebus sabaeus//** | PHYSICAL | 17 | 15 | 18 | 6 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 17 | 15 | 18 | 6 | | + | |
| - | | **//Cricetulus griseus//** | PHYSICAL | 59 | 58 | 71 | 13 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 59 | 58 | 71 | 13 | | + | |
| - | | **//Danio rerio//** | PHYSICAL | 248 | 210 | 207 | 42 | | + | |
| - | | ::: | GENETIC | 71 | 65 | 66 | 31 | | + | |
| - | | ::: | COMBINED | 319 | 272 | 263 | 71 | | + | |
| - | | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 33 | 20 | 25 | 9 | | + | |
| - | | ::: | GENETIC | 6 | 6 | 8 | 2 | | + | |
| - | | ::: | COMBINED | 39 | 23 | 29 | 10 | | + | |
| - | | **//Drosophila melanogaster//** | PHYSICAL | 62,215 | 52,407 | 9,007 | 3,690 | | + | |
| - | | ::: | GENETIC | 14,476 | 10,141 | 3,147 | 4,395 | | + | |
| - | | ::: | COMBINED | 76,691 | 61,195 | 9,345 | 7,159 | | + | |
| - | | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | + | |
| - | | ::: | GENETIC | 6 | 5 | 7 | 3 | | + | |
| - | | ::: | COMBINED | 71 | 62 | 64 | 6 | | + | |
| - | | **//Equus caballus//** | PHYSICAL | 2 | 2 | 4 | 2 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 2 | 2 | 4 | 2 | | + | |
| - | | **//Escherichia coli (K12)//** | PHYSICAL | 1 | 1 | 2 | 1 | | + | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Escherichia coli (K12/MC4100/BW2952)//** | PHYSICAL | 9 | 9 | 10 | 2 | | + | | **//Neurospora crassa (OR74A)//** | PHYSICAL | 33 | 32 | 35 | 3 | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 9 | 9 | 10 | 2 | | + | |
| - | | **//Escherichia coli (K12/MG1655)//** | PHYSICAL | 2,304 | 2,122 | 1,308 | 29 | | + | |
| - | | ::: | GENETIC | 26 | 25 | 36 | 12 | | + | |
| - | | ::: | COMBINED | 2,330 | 2,146 | 1,339 | 41 | | + | |
| - | | **//Escherichia coli (K12/W3110)//** | PHYSICAL | 12,804 | 12,801 | 2,045 | 3 | | + | |
| - | | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | + | |
| - | | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | + | |
| - | | **//Gallus gallus//** | PHYSICAL | 514 | 437 | 413 | 98 | | + | |
| - | | ::: | GENETIC | 13 | 10 | 15 | 10 | | + | |
| - | | ::: | COMBINED | 527 | 446 | 421 | 107 | | + | |
| - | | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 46 | 40 | 45 | 8 | | + | |
| - | | **//Hepatitus C Virus//** | PHYSICAL | 252 | 175 | 177 | 39 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 252 | 175 | 177 | 39 | | + | |
| - | | **//Homo sapiens//** | PHYSICAL | 532,149 | 396,398 | 24,195 | 30,601 | | + | |
| - | | ::: | GENETIC | 8,979 | 8,856 | 3,618 | 342 | | + | |
| - | | ::: | COMBINED | 541,128 | 404,566 | 24,613 | 30,738 | | + | |
| - | | **//Human Herpesvirus 1//** | PHYSICAL | 265 | 204 | 173 | 48 | | + | |
| - | | ::: | GENETIC | 6 | 6 | 7 | 1 | | + | |
| - | | ::: | COMBINED | 271 | 209 | 178 | 48 | | + | |
| - | | **//Human Herpesvirus 2//** | PHYSICAL | 12 | 6 | 10 | 5 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 12 | 6 | 10 | 5 | | + | |
| - | | **//Human Herpesvirus 3//** | PHYSICAL | 5 | 3 | 6 | 3 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 5 | 3 | 6 | 3 | | + | |
| - | | **//Human Herpesvirus 4//** | PHYSICAL | 429 | 326 | 323 | 47 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 429 | 326 | 323 | 47 | | + | |
| - | | **//Human Herpesvirus 5//** | PHYSICAL | 149 | 108 | 121 | 28 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 149 | 108 | 121 | 28 | | + | |
| - | | **//Human Herpesvirus 6A//** | PHYSICAL | 11 | 8 | 12 | 7 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 11 | 8 | 12 | 7 | | + | |
| - | | **//Human Herpesvirus 6B//** | PHYSICAL | 4 | 4 | 7 | 3 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 4 | 4 | 7 | 3 | | + | |
| - | | **//Human Herpesvirus 7//** | PHYSICAL | 1 | 1 | 2 | 1 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 1 | 1 | 2 | 1 | | + | |
| - | | **//Human Herpesvirus 8//** | PHYSICAL | 779 | 693 | 716 | 42 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 779 | 693 | 716 | 42 | | + | |
| - | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 2,042 | 1,331 | 1,141 | 356 | | + | |
| - | | ::: | GENETIC | 1 | 1 | 2 | 1 | | + | |
| - | | ::: | COMBINED | 2,043 | 1,331 | 1,141 | 357 | | + | |
| - | | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 89 | 80 | 63 | 13 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 89 | 80 | 63 | 13 | | + | |
| - | | **//Human papillomavirus (10)//** | PHYSICAL | 1 | 1 | 2 | 1 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 1 | 1 | 2 | 1 | | + | |
| - | | **//Human papillomavirus (16)//** | PHYSICAL | 263 | 188 | 175 | 28 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 263 | 188 | 175 | 28 | | + | |
| - | | **//Human papillomavirus (6b)//** | PHYSICAL | 20 | 20 | 22 | 2 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 20 | 20 | 22 | 2 | | + | |
| - | | **//Leishmania major (Friedlin)//** | PHYSICAL | 1 | 1 | 2 | 1 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 1 | 1 | 2 | 1 | | + | |
| - | | **//Macaca mulatta//** | PHYSICAL | 23 | 14 | 17 | 14 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 23 | 14 | 17 | 14 | | + | |
| - | | **//Meleagris gallopavo//** | PHYSICAL | 2 | 2 | 2 | 1 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 2 | 2 | 2 | 1 | | + | |
| - | | **//Mus musculus//** | PHYSICAL | 48,756 | 42,306 | 13,526 | 4,044 | | + | |
| - | | ::: | GENETIC | 385 | 340 | 344 | 196 | | + | |
| - | | ::: | COMBINED | 49,141 | 42,571 | 13,584 | 4,182 | | + | |
| - | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 13 | 11 | 14 | 4 | | + | |
| - | | ::: | GENETIC | 0 | 0 | 0 | 0 | | + | |
| - | | ::: | COMBINED | 13 | 11 | 14 | 4 | | + | |
| - | | **//Neurospora crassa (OR74A)//** | PHYSICAL | 11 | 10 | 12 | 2 | | + | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 11 | 10 | 12 | 2 | | + | | ::: | COMBINED | 33 | 32 | 35 | 3 | |
| | **//Nicotiana tomentosiformis//** | PHYSICAL | 3 | 2 | 2 | 1 | | | **//Nicotiana tomentosiformis//** | PHYSICAL | 3 | 2 | 2 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 3 | 2 | 2 | 1 | | | ::: | COMBINED | 3 | 2 | 2 | 1 | | ||
| - | | **//Oryctolagus cuniculus//** | PHYSICAL | 318 | 284 | 293 | 66 | | + | | **//Oryctolagus cuniculus//** | PHYSICAL | 385 | 340 | 350 | 74 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 318 | 284 | 293 | 66 | | + | | ::: | COMBINED | 385 | 340 | 350 | 74 | |
| - | | **//Oryza sativa (Japonica)//** | PHYSICAL | 346 | 330 | 314 | 21 | | + | | **//Oryza sativa (Japonica)//** | PHYSICAL | 364 | 344 | 328 | 23 | |
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
| - | | ::: | COMBINED | 348 | 332 | 314 | 21 | | + | | ::: | COMBINED | 366 | 346 | 328 | 23 | |
| | **//Ovis aries//** | PHYSICAL | 1 | 1 | 2 | 1 | | | **//Ovis aries//** | PHYSICAL | 1 | 1 | 2 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Pan troglodytes//** | PHYSICAL | 6 | 5 | 10 | 5 | | + | | **//Pan troglodytes//** | PHYSICAL | 49 | 48 | 54 | 6 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 6 | 5 | 10 | 5 | | + | | ::: | COMBINED | 49 | 48 | 54 | 6 | |
| - | | **//Pediculus humanus//** | PHYSICAL | 2 | 2 | 3 | 2 | | + | | **//Pediculus humanus//** | PHYSICAL | 5 | 3 | 4 | 3 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 2 | 2 | 3 | 2 | | + | | ::: | COMBINED | 5 | 3 | 4 | 3 | |
| - | | **//Plasmodium falciparum (3D7)//** | PHYSICAL | 2,545 | 2,508 | 1,227 | 5 | | + | | **//Plasmodium falciparum (3D7)//** | PHYSICAL | 2,552 | 2,511 | 1,232 | 7 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | + | | ::: | COMBINED | 2,552 | 2,511 | 1,232 | 7 | |
| - | | **//Rattus norvegicus//** | PHYSICAL | 7,839 | 6,662 | 4,179 | 1,172 | | + | | **//Rattus norvegicus//** | PHYSICAL | 10,571 | 9,167 | 5,080 | 1,387 | |
| | ::: | GENETIC | 19 | 19 | 31 | 12 | | | ::: | GENETIC | 19 | 19 | 31 | 12 | | ||
| - | | ::: | COMBINED | 7,858 | 6,672 | 4,189 | 1,175 | | + | | ::: | COMBINED | 10,590 | 9,177 | 5,090 | 1,390 | |
| | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 2 | 3 | 2 | | | ::: | COMBINED | 5 | 2 | 3 | 2 | | ||
| - | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 173,765 | 115,774 | 6,921 | 9,546 | | + | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 252,946 | 172,715 | 7,188 | 10,783 | |
| - | | ::: | GENETIC | 577,772 | 442,053 | 5,960 | 9,255 | | + | | ::: | GENETIC | 596,276 | 455,255 | 5,979 | 10,383 | |
| - | | ::: | COMBINED | 751,537 | 544,242 | 7,176 | 15,793 | | + | | ::: | COMBINED | 849,222 | 609,756 | 7,405 | 17,718 | |
| - | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 17,200 | 12,906 | 3,565 | 1,592 | | + | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 19,221 | 14,637 | 3,844 | 1,691 | |
| - | | ::: | GENETIC | 61,678 | 51,981 | 3,563 | 1,951 | | + | | ::: | GENETIC | 62,702 | 52,774 | 3,645 | 2,058 | |
| - | | ::: | COMBINED | 78,878 | 63,777 | 4,626 | 2,802 | | + | | ::: | COMBINED | 81,923 | 66,238 | 4,755 | 2,982 | |
| | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
| | ::: | COMBINED | 10 | 8 | 6 | 1 | | | ::: | COMBINED | 10 | 8 | 6 | 1 | | ||
| - | | **//Simian Immunodeficiency Virus//** | PHYSICAL | 34 | 16 | 19 | 16 | | + | | **//Severe acute respiratory syndrome coronavirus//** | PHYSICAL | 2,446 | 1,934 | 1,547 | 282 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 34 | 16 | 19 | 16 | | + | | ::: | COMBINED | 2,446 | 1,934 | 1,547 | 282 | |
| - | | **//Simian Virus 40//** | PHYSICAL | 11 | 5 | 6 | 7 | | + | | **//Severe acute respiratory syndrome coronavirus 2//** | PHYSICAL | 39,793 | 26,681 | 7,032 | 1,263 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 11 | 5 | 6 | 7 | | + | | ::: | COMBINED | 39,793 | 26,681 | 7,032 | 1,263 | |
| + | | **//Simian Immunodeficiency Virus//** | PHYSICAL | 37 | 18 | 21 | 18 | | ||
| + | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| + | | ::: | COMBINED | 37 | 18 | 21 | 18 | | ||
| + | | **//Simian Virus 40//** | PHYSICAL | 18 | 8 | 9 | 13 | | ||
| + | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| + | | ::: | COMBINED | 18 | 8 | 9 | 13 | | ||
| | **//Solanum lycopersicum//** | PHYSICAL | 137 | 107 | 44 | 8 | | | **//Solanum lycopersicum//** | PHYSICAL | 137 | 107 | 44 | 8 | | ||
| | ::: | GENETIC | 4 | 4 | 4 | 1 | | | ::: | GENETIC | 4 | 4 | 4 | 1 | | ||
| Line 511: | Line 227: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 3 | 3 | 5 | 3 | | | ::: | COMBINED | 3 | 3 | 5 | 3 | | ||
| + | | **//Sorghum bicolor//** | PHYSICAL | 1 | 1 | 2 | 1 | | ||
| + | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| + | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| | **//Streptococcus pneumoniae (ATCCBAA255)//** | PHYSICAL | 16 | 9 | 6 | 1 | | | **//Streptococcus pneumoniae (ATCCBAA255)//** | PHYSICAL | 16 | 9 | 6 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 517: | Line 236: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 17 | 16 | 17 | 3 | | | ::: | COMBINED | 17 | 16 | 17 | 3 | | ||
| - | | **//Sus scrofa//** | PHYSICAL | 89 | 83 | 100 | 31 | | + | | **//Sus scrofa//** | PHYSICAL | 116 | 104 | 125 | 45 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 89 | 83 | 100 | 31 | | + | | ::: | COMBINED | 116 | 104 | 125 | 45 | |
| | **//Tobacco Mosaic Virus//** | PHYSICAL | 3 | 2 | 3 | 1 | | | **//Tobacco Mosaic Virus//** | PHYSICAL | 3 | 2 | 3 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 526: | Line 245: | ||
| | ::: | GENETIC | 1 | 1 | 2 | 1 | | | ::: | GENETIC | 1 | 1 | 2 | 1 | | ||
| | ::: | COMBINED | 4 | 4 | 4 | 4 | | | ::: | COMBINED | 4 | 4 | 4 | 4 | | ||
| - | | **//Vaccinia Virus//** | PHYSICAL | 7 | 6 | 8 | 3 | | + | | **//Vaccinia Virus//** | PHYSICAL | 18 | 10 | 13 | 6 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 7 | 6 | 8 | 3 | | + | | ::: | COMBINED | 18 | 10 | 13 | 6 | |
| | **//Vitis vinifera//** | PHYSICAL | 1 | 1 | 2 | 1 | | | **//Vitis vinifera//** | PHYSICAL | 1 | 1 | 2 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Xenopus laevis//** | PHYSICAL | 1,412 | 1,248 | 1,144 | 231 | | + | | **//Xenopus laevis//** | PHYSICAL | 2,452 | 2,057 | 1,580 | 272 | |
| | ::: | GENETIC | 7 | 7 | 10 | 3 | | | ::: | GENETIC | 7 | 7 | 10 | 3 | | ||
| - | | ::: | COMBINED | 1,419 | 1,255 | 1,154 | 234 | | + | | ::: | COMBINED | 2,459 | 2,064 | 1,589 | 275 | |
| | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 13 | 21 | 9 | | | ::: | COMBINED | 18 | 13 | 21 | 9 | | ||
| - | | **//All Organisms//** | PHYSICAL | 916,351 | 693,825 | 72,406 | 49,893 | | + | | **//All Organisms//** | PHYSICAL | 1,843,877 | 1,416,813 | 84,081 | 61,356 | |
| - | | ::: | GENETIC | 837,335 | 685,594 | 21,983 | 16,251 | | + | | ::: | GENETIC | 883,522 | 725,556 | 26,541 | 17,802 | |
| - | | ::: | COMBINED | 1,753,686 | 1,361,694 | 76,943 | 61,059 | | + | | ::: | COMBINED | 2,727,399 | 2,118,782 | 88,325 | 73,533 | |
| ===== Chemical Interaction Statistics ===== | ===== Chemical Interaction Statistics ===== | ||
| Line 549: | Line 268: | ||
| | **//Escherichia coli (K12)//** | 5 | 2 | 2 | 3 | 2 | | | **//Escherichia coli (K12)//** | 5 | 2 | 2 | 3 | 2 | | ||
| | **//Escherichia coli (K12/MG1655)//** | 1,590 | 834 | 287 | 137 | 583 | | | **//Escherichia coli (K12/MG1655)//** | 1,590 | 834 | 287 | 137 | 583 | | ||
| - | | **//Homo sapiens//** | 25,841 | 10,854 | 2,183 | 8,944 | 4,593 | | + | | **//Homo sapiens//** | 28,619 | 12,296 | 2,294 | 9,543 | 5,854 | |
| | **//Human Herpesvirus 1//** | 65 | 24 | 3 | 24 | 21 | | | **//Human Herpesvirus 1//** | 65 | 24 | 3 | 24 | 21 | | ||
| | **//Human Herpesvirus 4//** | 10 | 3 | 3 | 6 | 3 | | | **//Human Herpesvirus 4//** | 10 | 3 | 3 | 6 | 3 | | ||
| | **//Human Immunodeficiency Virus 1//** | 105 | 53 | 2 | 48 | 53 | | | **//Human Immunodeficiency Virus 1//** | 105 | 53 | 2 | 48 | 53 | | ||
| | **//Leishmania major (Friedlin)//** | 8 | 4 | 1 | 2 | 4 | | | **//Leishmania major (Friedlin)//** | 8 | 4 | 1 | 2 | 4 | | ||
| + | | **//Middle-East Respiratory Syndrome-related Coronavirus//** | 18 | 18 | 5 | 12 | 18 | | ||
| | **//Mus musculus//** | 2 | 1 | 1 | 2 | 1 | | | **//Mus musculus//** | 2 | 1 | 1 | 2 | 1 | | ||
| | **//Mycobacterium tuberculosis (CDC1551)//** | 3 | 3 | 3 | 1 | 3 | | | **//Mycobacterium tuberculosis (CDC1551)//** | 3 | 3 | 3 | 1 | 3 | | ||
| Line 561: | Line 281: | ||
| | **//Rattus norvegicus//** | 2 | 2 | 1 | 2 | 2 | | | **//Rattus norvegicus//** | 2 | 2 | 1 | 2 | 2 | | ||
| | **//Saccharomyces cerevisiae (S288c)//** | 7 | 7 | 2 | 2 | 7 | | | **//Saccharomyces cerevisiae (S288c)//** | 7 | 7 | 2 | 2 | 7 | | ||
| + | | **//Severe acute respiratory syndrome coronavirus//** | 30 | 30 | 7 | 22 | 29 | | ||
| + | | **//Severe acute respiratory syndrome coronavirus 2//** | 225 | 214 | 12 | 125 | 198 | | ||
| | **//Streptococcus pneumoniae (ATCCBAA255)//** | 82 | 72 | 8 | 11 | 29 | | | **//Streptococcus pneumoniae (ATCCBAA255)//** | 82 | 72 | 8 | 11 | 29 | | ||
| | **//Streptococcus pneumoniae (ATCCBAA334)//** | 61 | 26 | 10 | 18 | 19 | | | **//Streptococcus pneumoniae (ATCCBAA334)//** | 61 | 26 | 10 | 18 | 19 | | ||
| | **//Synechococcus elongatus (PCC6301)//** | 4 | 2 | 1 | 2 | 2 | | | **//Synechococcus elongatus (PCC6301)//** | 4 | 2 | 1 | 2 | 2 | | ||
| | **//Vaccinia Virus//** | 21 | 11 | 2 | 3 | 11 | | | **//Vaccinia Virus//** | 21 | 11 | 2 | 3 | 11 | | ||
| - | | **//All Organisms//** | 28,093 | 12,015 | 2,572 | 9,219 | 5,173 | | + | | **//All Organisms//** | 31,144 | 13,719 | 2,707 | 9,952 | 6,597 | |
| ===== Post Translational Modification (PTM) Statistics ===== | ===== Post Translational Modification (PTM) Statistics ===== | ||
| Line 586: | Line 308: | ||
| | **//Drosophila melanogaster//** | NEDDYLATION | 0 | 0 | 2 | 0 | 2 | 1 | | | **//Drosophila melanogaster//** | NEDDYLATION | 0 | 0 | 2 | 0 | 2 | 1 | | ||
| | ::: | SUMOYLATION | 0 | 0 | 2 | 0 | 2 | 2 | | | ::: | SUMOYLATION | 0 | 0 | 2 | 0 | 2 | 2 | | ||
| - | | ::: | UBIQUITINATION | 0 | 0 | 7 | 0 | 7 | 4 | | + | | ::: | UBIQUITINATION | 3,534 | 3,534 | 7 | 3,343 | 1,045 | 5 | |
| - | | ::: | COMBINED | 0 | 0 | 11 | 0 | 9 | 6 | | + | | ::: | COMBINED | 3,534 | 3,534 | 11 | 3,343 | 1,047 | 7 | |
| | **//Gallus gallus//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | | **//Gallus gallus//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | ||
| | ::: | UBIQUITINATION | 0 | 0 | 1 | 0 | 1 | 1 | | | ::: | UBIQUITINATION | 0 | 0 | 1 | 0 | 1 | 1 | | ||
| Line 596: | Line 318: | ||
| | ::: | FAT10YLATION | 0 | 0 | 696 | 0 | 659 | 5 | | | ::: | FAT10YLATION | 0 | 0 | 696 | 0 | 659 | 5 | | ||
| | ::: | ISGYLATION | 0 | 0 | 28 | 0 | 28 | 7 | | | ::: | ISGYLATION | 0 | 0 | 28 | 0 | 28 | 7 | | ||
| - | | ::: | NEDDYLATION | 0 | 0 | 1,093 | 0 | 903 | 75 | | + | | ::: | NEDDYLATION | 2,835 | 2,835 | 1,093 | 1,605 | 1,282 | 76 | |
| + | | ::: | PHOSPHORYLATION | 49,613 | 45,405 | 0 | 14,434 | 4,597 | 3 | | ||
| | ::: | SUMOYLATION | 0 | 0 | 4,392 | 0 | 2,317 | 330 | | | ::: | SUMOYLATION | 0 | 0 | 4,392 | 0 | 2,317 | 330 | | ||
| - | | ::: | UBIQUITINATION | 705,673 | 383,699 | 39,038 | 54,962 | 11,895 | 3,118 | | + | | ::: | UBIQUITINATION | 901,514 | 436,834 | 39,038 | 62,095 | 12,523 | 3,125 | |
| - | | ::: | COMBINED | 705,673 | 383,699 | 45,249 | 54,962 | 12,022 | 3,408 | | + | | ::: | COMBINED | 953,962 | 485,074 | 45,249 | 63,685 | 13,034 | 3,417 | |
| | **//Human Herpesvirus 1//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | | **//Human Herpesvirus 1//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | ||
| | ::: | UBIQUITINATION | 0 | 0 | 4 | 0 | 3 | 4 | | | ::: | UBIQUITINATION | 0 | 0 | 4 | 0 | 3 | 4 | | ||
| Line 618: | Line 341: | ||
| | ::: | ISGYLATION | 0 | 0 | 43 | 0 | 42 | 2 | | | ::: | ISGYLATION | 0 | 0 | 43 | 0 | 42 | 2 | | ||
| | ::: | NEDDYLATION | 0 | 0 | 7 | 0 | 6 | 5 | | | ::: | NEDDYLATION | 0 | 0 | 7 | 0 | 6 | 5 | | ||
| - | | ::: | SUMOYLATION | 0 | 0 | 49 | 0 | 41 | 39 | | + | | ::: | SUMOYLATION | 222 | 222 | 49 | 173 | 208 | 40 | |
| | ::: | UBIQUITINATION | 34,482 | 34,482 | 737 | 13,810 | 3,872 | 444 | | | ::: | UBIQUITINATION | 34,482 | 34,482 | 737 | 13,810 | 3,872 | 444 | | ||
| | ::: | UFMYLATION | 0 | 0 | 10 | 0 | 10 | 1 | | | ::: | UFMYLATION | 0 | 0 | 10 | 0 | 10 | 1 | | ||
| - | | ::: | COMBINED | 34,482 | 34,482 | 847 | 13,810 | 3,901 | 484 | | + | | ::: | COMBINED | 34,704 | 34,704 | 847 | 13,929 | 4,009 | 485 | |
| | **//Rattus norvegicus//** | NEDDYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | | **//Rattus norvegicus//** | NEDDYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | ||
| | ::: | SUMOYLATION | 0 | 0 | 6 | 0 | 6 | 6 | | | ::: | SUMOYLATION | 0 | 0 | 6 | 0 | 6 | 6 | | ||
| Line 629: | Line 352: | ||
| | ::: | PHOSPHORYLATION | 42,907 | 19,981 | 0 | 3,165 | 3,165 | 528 | | | ::: | PHOSPHORYLATION | 42,907 | 19,981 | 0 | 3,165 | 3,165 | 528 | | ||
| | ::: | SUMOYLATION | 0 | 0 | 1,438 | 0 | 818 | 67 | | | ::: | SUMOYLATION | 0 | 0 | 1,438 | 0 | 818 | 67 | | ||
| - | | ::: | UBIQUITINATION | 34,338 | 20,019 | 9,736 | 2,549 | 3,678 | 215 | | + | | ::: | UBIQUITINATION | 35,651 | 20,308 | 9,736 | 2,574 | 3,686 | 216 | |
| - | | ::: | COMBINED | 77,245 | 40,000 | 11,184 | 3,918 | 4,499 | 802 | | + | | ::: | COMBINED | 78,558 | 40,289 | 11,184 | 3,928 | 4,501 | 803 | |
| | **//Schizosaccharomyces pombe (972h)//** | UBIQUITINATION | 0 | 0 | 4 | 0 | 4 | 3 | | | **//Schizosaccharomyces pombe (972h)//** | UBIQUITINATION | 0 | 0 | 4 | 0 | 4 | 3 | | ||
| | ::: | COMBINED | 0 | 0 | 4 | 0 | 4 | 3 | | | ::: | COMBINED | 0 | 0 | 4 | 0 | 4 | 3 | | ||
| + | | **//Severe acute respiratory syndrome coronavirus 2//** | PHOSPHORYLATION | 79 | 50 | 0 | 6 | 4 | 3 | | ||
| + | | ::: | UBIQUITINATION | 106 | 106 | 0 | 20 | 9 | 1 | | ||
| + | | ::: | COMBINED | 185 | 156 | 0 | 20 | 9 | 4 | | ||
| | **//Xenopus laevis//** | UBIQUITINATION | 0 | 0 | 2 | 0 | 2 | 2 | | | **//Xenopus laevis//** | UBIQUITINATION | 0 | 0 | 2 | 0 | 2 | 2 | | ||
| | ::: | COMBINED | 0 | 0 | 2 | 0 | 2 | 2 | | | ::: | COMBINED | 0 | 0 | 2 | 0 | 2 | 2 | | ||
| Line 638: | Line 364: | ||
| | ::: | FAT10YLATION | 0 | 0 | 696 | 0 | 659 | 5 | | | ::: | FAT10YLATION | 0 | 0 | 696 | 0 | 659 | 5 | | ||
| | ::: | ISGYLATION | 0 | 0 | 71 | 0 | 70 | 8 | | | ::: | ISGYLATION | 0 | 0 | 71 | 0 | 70 | 8 | | ||
| - | | ::: | NEDDYLATION | 0 | 0 | 1,113 | 0 | 916 | 84 | | + | | ::: | NEDDYLATION | 2,835 | 2,835 | 1,113 | 1,605 | 1,295 | 85 | |
| - | | ::: | PHOSPHORYLATION | 42,907 | 19,981 | 0 | 3,165 | 3,165 | 528 | | + | | ::: | PHOSPHORYLATION | 92,599 | 65,436 | 0 | 17,605 | 7,766 | 532 | |
| - | | ::: | SUMOYLATION | 0 | 0 | 5,898 | 0 | 3,195 | 433 | | + | | ::: | SUMOYLATION | 222 | 222 | 5,898 | 173 | 3,362 | 434 | |
| - | | ::: | UBIQUITINATION | 774,493 | 438,200 | 49,605 | 71,321 | 19,522 | 3,741 | | + | | ::: | UBIQUITINATION | 975,287 | 495,264 | 49,605 | 81,842 | 21,205 | 3,750 | |
| | ::: | UFMYLATION | 0 | 0 | 10 | 0 | 10 | 1 | | | ::: | UFMYLATION | 0 | 0 | 10 | 0 | 10 | 1 | | ||
| - | | ::: | COMBINED | 817,400 | 458,181 | 57,396 | 72,690 | 20,513 | 4,643 | | + | | ::: | COMBINED | 1,070,943 | 563,757 | 57,396 | 84,905 | 22,682 | 4,656 | |
| **Note:** Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions. | **Note:** Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions. | ||
| ====== Previous Build Statistics ====== | ====== Previous Build Statistics ====== | ||
| + | ==== 2024 Updates ==== | ||
| + | * **[[Build 4.4.231]]** | ||
| + | * **[[Build 4.4.230]]** | ||
| + | * **[[Build 4.4.229]]** | ||
| + | |||
| + | ==== 2023 Updates ==== | ||
| + | * **[[Build 4.4.228]]** | ||
| + | * **[[Build 4.4.227]]** | ||
| + | * **[[Build 4.4.226]]** | ||
| + | * **[[Build 4.4.225]]** | ||
| + | * **[[Build 4.4.224]]** | ||
| + | * **[[Build 4.4.223]]** | ||
| + | * **[[Build 4.4.222]]** | ||
| + | * **[[Build 4.4.221]]** | ||
| + | * **[[Build 4.4.220]]** | ||
| + | * **[[Build 4.4.219]]** | ||
| + | * **[[Build 4.4.218]]** | ||
| + | * **[[Build 4.4.217]]** | ||
| + | |||
| + | ==== 2022 Updates ==== | ||
| + | * **[[Build 4.4.216]]** | ||
| + | * **[[Build 4.4.215]]** | ||
| + | * **[[Build 4.4.214]]** | ||
| + | * **[[Build 4.4.213]]** | ||
| + | * **[[Build 4.4.212]]** | ||
| + | * **[[Build 4.4.211]]** | ||
| + | * **[[Build 4.4.210]]** | ||
| + | * **[[Build 4.4.209]]** | ||
| + | * **[[Build 4.4.208]]** | ||
| + | * **[[Build 4.4.207]]** | ||
| + | * **[[Build 4.4.206]]** | ||
| + | * **[[Build 4.4.205]]** | ||
| + | |||
| + | ==== 2021 Updates ==== | ||
| + | * **[[Build 4.4.204]]** | ||
| + | * **[[Build 4.4.203]]** | ||
| + | * **[[Build 4.4.202]]** | ||
| + | * **[[Build 4.4.201]]** | ||
| + | * **[[Build 4.4.200]]** | ||
| + | * **[[Build 4.4.199]]** | ||
| + | * **[[Build 4.4.198]]** | ||
| + | * **[[Build 4.4.197]]** | ||
| + | * **[[Build 4.3.196]]** | ||
| + | * **[[Build 4.3.195]]** | ||
| + | * **[[Build 4.3.194]]** | ||
| + | * **[[Build 4.2.193]]** | ||
| + | |||
| + | ==== 2020 Updates ==== | ||
| + | * **[[Build 4.2.192]]** | ||
| + | * **[[Build 4.2.191]]** | ||
| + | * **[[Build 4.1.190]]** | ||
| + | * **[[Build 4.0.189]]** | ||
| + | * **[[Build 3.5.188]]** | ||
| + | * **[[Build 3.5.187]]** | ||
| + | * **[[Build 3.5.186]]** | ||
| + | * **[[Build 3.5.185]]** | ||
| + | * **[[Build 3.5.184]]** | ||
| + | * **[[Build 3.5.183]]** | ||
| + | * **[[Build 3.5.182]]** | ||
| + | * **[[Build 3.5.181]]** | ||
| + | * **[[Build 3.5.180]]** | ||
| + | |||
| ==== 2019 Updates ==== | ==== 2019 Updates ==== | ||
| + | * **[[Build 3.5.179]]** | ||
| * **[[Build 3.5.178]]** | * **[[Build 3.5.178]]** | ||
| * **[[Build 3.5.177]]** | * **[[Build 3.5.177]]** | ||