BioGRID Database Statistics
Differences
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statistics [2019/08/01 01:03] biogridadmin |
statistics [2019/10/01 01:43] biogridadmin |
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| * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | ||
| * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | ||
| - | ====== Current Build Statistics (3.5.175) - August 2019 ====== | + | ====== Current Build Statistics (3.5.177) - October 2019 ====== |
| ===== Physical and Genetic Interaction Statistics ===== | ===== Physical and Genetic Interaction Statistics ===== | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,613 | 48,572 | 10,417 | 2,298 | | + | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,621 | 48,577 | 10,418 | 2,299 | |
| | ::: | GENETIC | 350 | 282 | 304 | 154 | | | ::: | GENETIC | 350 | 282 | 304 | 154 | | ||
| - | | ::: | COMBINED | 55,963 | 48,767 | 10,467 | 2,378 | | + | | ::: | COMBINED | 55,971 | 48,772 | 10,468 | 2,379 | |
| | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 3 | 2 | | | ::: | COMBINED | 2 | 2 | 3 | 2 | | ||
| - | | **//Bos taurus//** | PHYSICAL | 480 | 432 | 456 | 192 | | + | | **//Bos taurus//** | PHYSICAL | 481 | 433 | 457 | 193 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 480 | 432 | 456 | 192 | | + | | ::: | COMBINED | 481 | 433 | 457 | 193 | |
| - | | **//Caenorhabditis elegans//** | PHYSICAL | 22,093 | 21,446 | 5,910 | 201 | | + | | **//Caenorhabditis elegans//** | PHYSICAL | 22,232 | 21,583 | 5,980 | 202 | |
| | ::: | GENETIC | 2,338 | 2,271 | 1,133 | 35 | | | ::: | GENETIC | 2,338 | 2,271 | 1,133 | 35 | | ||
| - | | ::: | COMBINED | 24,431 | 23,678 | 6,337 | 219 | | + | | ::: | COMBINED | 24,570 | 23,813 | 6,404 | 220 | |
| | **//Candida albicans (SC5314)//** | PHYSICAL | 1,450 | 1,226 | 876 | 166 | | | **//Candida albicans (SC5314)//** | PHYSICAL | 1,450 | 1,226 | 876 | 166 | | ||
| | ::: | GENETIC | 527 | 450 | 369 | 35 | | | ::: | GENETIC | 527 | 450 | 369 | 35 | | ||
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| | ::: | GENETIC | 6 | 6 | 8 | 2 | | | ::: | GENETIC | 6 | 6 | 8 | 2 | | ||
| | ::: | COMBINED | 38 | 22 | 27 | 9 | | | ::: | COMBINED | 38 | 22 | 27 | 9 | | ||
| - | | **//Drosophila melanogaster//** | PHYSICAL | 62,208 | 52,404 | 9,003 | 3,685 | | + | | **//Drosophila melanogaster//** | PHYSICAL | 62,209 | 52,404 | 9,003 | 3,686 | |
| | ::: | GENETIC | 14,475 | 10,140 | 3,146 | 4,394 | | | ::: | GENETIC | 14,475 | 10,140 | 3,146 | 4,394 | | ||
| - | | ::: | COMBINED | 76,683 | 61,191 | 9,340 | 7,153 | | + | | ::: | COMBINED | 76,684 | 61,191 | 9,340 | 7,154 | |
| | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | ||
| | ::: | GENETIC | 6 | 5 | 7 | 3 | | | ::: | GENETIC | 6 | 5 | 7 | 3 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 9 | 9 | 10 | 2 | | | ::: | COMBINED | 9 | 9 | 10 | 2 | | ||
| - | | **//Escherichia coli (K12/MG1655)//** | PHYSICAL | 2,299 | 2,117 | 1,303 | 26 | | + | | **//Escherichia coli (K12/MG1655)//** | PHYSICAL | 2,301 | 2,119 | 1,305 | 28 | |
| | ::: | GENETIC | 26 | 25 | 36 | 12 | | | ::: | GENETIC | 26 | 25 | 36 | 12 | | ||
| - | | ::: | COMBINED | 2,325 | 2,141 | 1,334 | 38 | | + | | ::: | COMBINED | 2,327 | 2,143 | 1,336 | 40 | |
| | **//Escherichia coli (K12/W3110)//** | PHYSICAL | 12,804 | 12,801 | 2,045 | 3 | | | **//Escherichia coli (K12/W3110)//** | PHYSICAL | 12,804 | 12,801 | 2,045 | 3 | | ||
| | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | ||
| | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | ||
| - | | **//Gallus gallus//** | PHYSICAL | 509 | 432 | 406 | 94 | | + | | **//Gallus gallus//** | PHYSICAL | 510 | 433 | 408 | 95 | |
| | ::: | GENETIC | 13 | 10 | 15 | 10 | | | ::: | GENETIC | 13 | 10 | 15 | 10 | | ||
| - | | ::: | COMBINED | 522 | 441 | 414 | 103 | | + | | ::: | COMBINED | 523 | 442 | 416 | 104 | |
| | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 46 | 40 | 45 | 8 | | | ::: | COMBINED | 46 | 40 | 45 | 8 | | ||
| - | | **//Hepatitus C Virus//** | PHYSICAL | 204 | 134 | 136 | 36 | | + | | **//Hepatitus C Virus//** | PHYSICAL | 207 | 135 | 137 | 37 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 204 | 134 | 136 | 36 | | + | | ::: | COMBINED | 207 | 135 | 137 | 37 | |
| - | | **//Homo sapiens//** | PHYSICAL | 516,942 | 384,954 | 23,972 | 29,919 | | + | | **//Homo sapiens//** | PHYSICAL | 523,461 | 389,300 | 24,024 | 30,257 | |
| | ::: | GENETIC | 7,808 | 7,716 | 2,678 | 335 | | | ::: | GENETIC | 7,808 | 7,716 | 2,678 | 335 | | ||
| - | | ::: | COMBINED | 524,750 | 392,033 | 24,322 | 30,052 | | + | | ::: | COMBINED | 531,269 | 396,364 | 24,373 | 30,390 | |
| | **//Human Herpesvirus 1//** | PHYSICAL | 265 | 204 | 173 | 48 | | | **//Human Herpesvirus 1//** | PHYSICAL | 265 | 204 | 173 | 48 | | ||
| | ::: | GENETIC | 6 | 6 | 7 | 1 | | | ::: | GENETIC | 6 | 6 | 7 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 429 | 326 | 323 | 47 | | | ::: | COMBINED | 429 | 326 | 323 | 47 | | ||
| - | | **//Human Herpesvirus 5//** | PHYSICAL | 125 | 87 | 99 | 27 | | + | | **//Human Herpesvirus 5//** | PHYSICAL | 149 | 108 | 121 | 28 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 125 | 87 | 99 | 27 | | + | | ::: | COMBINED | 149 | 108 | 121 | 28 | |
| | **//Human Herpesvirus 6A//** | PHYSICAL | 11 | 8 | 12 | 7 | | | **//Human Herpesvirus 6A//** | PHYSICAL | 11 | 8 | 12 | 7 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 779 | 693 | 716 | 42 | | | ::: | COMBINED | 779 | 693 | 716 | 42 | | ||
| - | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 2,026 | 1,325 | 1,137 | 352 | | + | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 2,041 | 1,330 | 1,141 | 355 | |
| | ::: | GENETIC | 1 | 1 | 2 | 1 | | | ::: | GENETIC | 1 | 1 | 2 | 1 | | ||
| - | | ::: | COMBINED | 2,027 | 1,325 | 1,137 | 353 | | + | | ::: | COMBINED | 2,042 | 1,330 | 1,141 | 356 | |
| | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 23 | 15 | 19 | 12 | | | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 23 | 15 | 19 | 12 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Human papillomavirus (16)//** | PHYSICAL | 255 | 186 | 173 | 25 | | + | | **//Human papillomavirus (16)//** | PHYSICAL | 263 | 188 | 175 | 28 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 255 | 186 | 173 | 25 | | + | | ::: | COMBINED | 263 | 188 | 175 | 28 | |
| | **//Human papillomavirus (6b)//** | PHYSICAL | 20 | 20 | 22 | 2 | | | **//Human papillomavirus (6b)//** | PHYSICAL | 20 | 20 | 22 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Macaca mulatta//** | PHYSICAL | 22 | 13 | 15 | 13 | | + | | **//Macaca mulatta//** | PHYSICAL | 23 | 14 | 17 | 14 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 22 | 13 | 15 | 13 | | + | | ::: | COMBINED | 23 | 14 | 17 | 14 | |
| | **//Meleagris gallopavo//** | PHYSICAL | 2 | 2 | 2 | 1 | | | **//Meleagris gallopavo//** | PHYSICAL | 2 | 2 | 2 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 2 | 1 | | | ::: | COMBINED | 2 | 2 | 2 | 1 | | ||
| - | | **//Mus musculus//** | PHYSICAL | 47,804 | 41,421 | 13,435 | 3,986 | | + | | **//Mus musculus//** | PHYSICAL | 47,951 | 41,532 | 13,451 | 4,008 | |
| | ::: | GENETIC | 382 | 337 | 341 | 194 | | | ::: | GENETIC | 382 | 337 | 341 | 194 | | ||
| - | | ::: | COMBINED | 48,186 | 41,683 | 13,495 | 4,123 | | + | | ::: | COMBINED | 48,333 | 41,794 | 13,511 | 4,145 | |
| | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 12 | 10 | 13 | 3 | | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 12 | 10 | 13 | 3 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 3 | 2 | 2 | 1 | | | ::: | COMBINED | 3 | 2 | 2 | 1 | | ||
| - | | **//Oryctolagus cuniculus//** | PHYSICAL | 316 | 282 | 289 | 65 | | + | | **//Oryctolagus cuniculus//** | PHYSICAL | 318 | 284 | 293 | 66 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 316 | 282 | 289 | 65 | | + | | ::: | COMBINED | 318 | 284 | 293 | 66 | |
| | **//Oryza sativa (Japonica)//** | PHYSICAL | 343 | 327 | 310 | 20 | | | **//Oryza sativa (Japonica)//** | PHYSICAL | 343 | 327 | 310 | 20 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | ||
| - | | **//Rattus norvegicus//** | PHYSICAL | 7,798 | 6,639 | 4,166 | 1,162 | | + | | **//Rattus norvegicus//** | PHYSICAL | 7,829 | 6,653 | 4,173 | 1,165 | |
| | ::: | GENETIC | 19 | 19 | 31 | 12 | | | ::: | GENETIC | 19 | 19 | 31 | 12 | | ||
| - | | ::: | COMBINED | 7,817 | 6,649 | 4,176 | 1,165 | | + | | ::: | COMBINED | 7,848 | 6,663 | 4,183 | 1,168 | |
| | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 2 | 3 | 2 | | | ::: | COMBINED | 5 | 2 | 3 | 2 | | ||
| - | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 172,084 | 114,758 | 6,913 | 9,449 | | + | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 173,640 | 115,729 | 6,917 | 9,520 | |
| - | | ::: | GENETIC | 576,220 | 441,111 | 5,958 | 9,177 | | + | | ::: | GENETIC | 577,610 | 441,949 | 5,960 | 9,244 | |
| - | | ::: | COMBINED | 748,304 | 542,510 | 7,168 | 15,651 | | + | | ::: | COMBINED | 751,250 | 544,097 | 7,172 | 15,761 | |
| - | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 15,899 | 11,789 | 3,335 | 1,525 | | + | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 17,054 | 12,843 | 3,558 | 1,555 | |
| - | | ::: | GENETIC | 60,688 | 51,126 | 3,491 | 1,876 | | + | | ::: | GENETIC | 61,517 | 51,879 | 3,556 | 1,912 | |
| - | | ::: | COMBINED | 76,587 | 61,932 | 4,504 | 2,688 | | + | | ::: | COMBINED | 78,571 | 63,640 | 4,620 | 2,742 | |
| | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Xenopus laevis//** | PHYSICAL | 1,406 | 1,244 | 1,140 | 228 | | + | | **//Xenopus laevis//** | PHYSICAL | 1,408 | 1,246 | 1,141 | 229 | |
| | ::: | GENETIC | 7 | 7 | 10 | 3 | | | ::: | GENETIC | 7 | 7 | 10 | 3 | | ||
| - | | ::: | COMBINED | 1,413 | 1,251 | 1,150 | 231 | | + | | ::: | COMBINED | 1,415 | 1,253 | 1,151 | 232 | |
| | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 13 | 21 | 9 | | | ::: | COMBINED | 18 | 13 | 21 | 9 | | ||
| - | | **//All Organisms//** | PHYSICAL | 894,880 | 677,442 | 71,266 | 49,019 | | + | | **//All Organisms//** | PHYSICAL | 904,306 | 683,985 | 71,614 | 49,464 | |
| - | | ::: | GENETIC | 833,618 | 682,653 | 20,965 | 16,089 | | + | | ::: | GENETIC | 835,837 | 684,244 | 21,032 | 16,191 | |
| - | | ::: | COMBINED | 1,728,498 | 1,342,777 | 75,892 | 60,088 | | + | | ::: | COMBINED | 1,740,143 | 1,350,574 | 76,129 | 60,595 | |
| ===== Chemical Interaction Statistics ===== | ===== Chemical Interaction Statistics ===== | ||
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| ====== Previous Build Statistics ====== | ====== Previous Build Statistics ====== | ||
| ==== 2019 Updates ==== | ==== 2019 Updates ==== | ||
| + | * **[[Build 3.5.177]]** | ||
| + | * **[[Build 3.5.176]]** | ||
| * **[[Build 3.5.175]]** | * **[[Build 3.5.175]]** | ||
| * **[[Build 3.5.174]]** | * **[[Build 3.5.174]]** | ||