BioGRID Database Statistics
Differences
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statistics [2019/06/28 02:30] biogridadmin |
statistics [2019/08/01 01:03] biogridadmin |
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| * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | ||
| * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | ||
| - | ====== Current Build Statistics (3.5.174) - July 2019 ====== | + | ====== Current Build Statistics (3.5.175) - August 2019 ====== |
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 3 | 2 | | | ::: | COMBINED | 2 | 2 | 3 | 2 | | ||
| - | | **//Bos taurus//** | PHYSICAL | 479 | 431 | 455 | 191 | | + | | **//Bos taurus//** | PHYSICAL | 480 | 432 | 456 | 192 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 479 | 431 | 455 | 191 | | + | | ::: | COMBINED | 480 | 432 | 456 | 192 | |
| - | | **//Caenorhabditis elegans//** | PHYSICAL | 6,364 | 5,811 | 3,282 | 198 | | + | | **//Caenorhabditis elegans//** | PHYSICAL | 22,093 | 21,446 | 5,910 | 201 | |
| | ::: | GENETIC | 2,338 | 2,271 | 1,133 | 35 | | | ::: | GENETIC | 2,338 | 2,271 | 1,133 | 35 | | ||
| - | | ::: | COMBINED | 8,702 | 8,057 | 3,955 | 216 | | + | | ::: | COMBINED | 24,431 | 23,678 | 6,337 | 219 | |
| - | | **//Candida albicans (SC5314)//** | PHYSICAL | 1,080 | 876 | 705 | 152 | | + | | **//Candida albicans (SC5314)//** | PHYSICAL | 1,450 | 1,226 | 876 | 166 | |
| - | | ::: | GENETIC | 521 | 444 | 363 | 32 | | + | | ::: | GENETIC | 527 | 450 | 369 | 35 | |
| - | | ::: | COMBINED | 1,601 | 1,304 | 975 | 166 | | + | | ::: | COMBINED | 1,977 | 1,652 | 1,139 | 180 | |
| | **//Canis familiaris//** | PHYSICAL | 138 | 126 | 144 | 26 | | | **//Canis familiaris//** | PHYSICAL | 138 | 126 | 144 | 26 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 17 | 15 | 18 | 6 | | | ::: | COMBINED | 17 | 15 | 18 | 6 | | ||
| - | | **//Cricetulus griseus//** | PHYSICAL | 55 | 55 | 65 | 10 | | + | | **//Cricetulus griseus//** | PHYSICAL | 58 | 57 | 69 | 12 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 55 | 55 | 65 | 10 | | + | | ::: | COMBINED | 58 | 57 | 69 | 12 | |
| | **//Danio rerio//** | PHYSICAL | 248 | 210 | 207 | 42 | | | **//Danio rerio//** | PHYSICAL | 248 | 210 | 207 | 42 | | ||
| | ::: | GENETIC | 71 | 65 | 66 | 31 | | | ::: | GENETIC | 71 | 65 | 66 | 31 | | ||
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| | ::: | GENETIC | 6 | 6 | 8 | 2 | | | ::: | GENETIC | 6 | 6 | 8 | 2 | | ||
| | ::: | COMBINED | 38 | 22 | 27 | 9 | | | ::: | COMBINED | 38 | 22 | 27 | 9 | | ||
| - | | **//Drosophila melanogaster//** | PHYSICAL | 62,204 | 52,402 | 9,002 | 3,684 | | + | | **//Drosophila melanogaster//** | PHYSICAL | 62,208 | 52,404 | 9,003 | 3,685 | |
| | ::: | GENETIC | 14,475 | 10,140 | 3,146 | 4,394 | | | ::: | GENETIC | 14,475 | 10,140 | 3,146 | 4,394 | | ||
| - | | ::: | COMBINED | 76,679 | 61,190 | 9,339 | 7,153 | | + | | ::: | COMBINED | 76,683 | 61,191 | 9,340 | 7,153 | |
| | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | ||
| | ::: | GENETIC | 6 | 5 | 7 | 3 | | | ::: | GENETIC | 6 | 5 | 7 | 3 | | ||
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| | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | ||
| | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | ||
| - | | **//Gallus gallus//** | PHYSICAL | 508 | 431 | 404 | 93 | | + | | **//Gallus gallus//** | PHYSICAL | 509 | 432 | 406 | 94 | |
| | ::: | GENETIC | 13 | 10 | 15 | 10 | | | ::: | GENETIC | 13 | 10 | 15 | 10 | | ||
| - | | ::: | COMBINED | 521 | 440 | 412 | 102 | | + | | ::: | COMBINED | 522 | 441 | 414 | 103 | |
| | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 46 | 40 | 45 | 8 | | | ::: | COMBINED | 46 | 40 | 45 | 8 | | ||
| - | | **//Hepatitus C Virus//** | PHYSICAL | 200 | 133 | 135 | 35 | | + | | **//Hepatitus C Virus//** | PHYSICAL | 204 | 134 | 136 | 36 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 200 | 133 | 135 | 35 | | + | | ::: | COMBINED | 204 | 134 | 136 | 36 | |
| - | | **//Homo sapiens//** | PHYSICAL | 512,912 | 381,958 | 23,929 | 29,695 | | + | | **//Homo sapiens//** | PHYSICAL | 516,942 | 384,954 | 23,972 | 29,919 | |
| - | | ::: | GENETIC | 7,807 | 7,715 | 2,677 | 334 | | + | | ::: | GENETIC | 7,808 | 7,716 | 2,678 | 335 | |
| - | | ::: | COMBINED | 520,719 | 389,038 | 24,280 | 29,828 | | + | | ::: | COMBINED | 524,750 | 392,033 | 24,322 | 30,052 | |
| | **//Human Herpesvirus 1//** | PHYSICAL | 265 | 204 | 173 | 48 | | | **//Human Herpesvirus 1//** | PHYSICAL | 265 | 204 | 173 | 48 | | ||
| | ::: | GENETIC | 6 | 6 | 7 | 1 | | | ::: | GENETIC | 6 | 6 | 7 | 1 | | ||
| | ::: | COMBINED | 271 | 209 | 178 | 48 | | | ::: | COMBINED | 271 | 209 | 178 | 48 | | ||
| - | | **//Human Herpesvirus 2//** | PHYSICAL | 6 | 4 | 7 | 4 | | + | | **//Human Herpesvirus 2//** | PHYSICAL | 12 | 6 | 10 | 5 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 6 | 4 | 7 | 4 | | + | | ::: | COMBINED | 12 | 6 | 10 | 5 | |
| | **//Human Herpesvirus 3//** | PHYSICAL | 5 | 3 | 6 | 3 | | | **//Human Herpesvirus 3//** | PHYSICAL | 5 | 3 | 6 | 3 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 3 | 6 | 3 | | | ::: | COMBINED | 5 | 3 | 6 | 3 | | ||
| - | | **//Human Herpesvirus 4//** | PHYSICAL | 408 | 308 | 307 | 46 | | + | | **//Human Herpesvirus 4//** | PHYSICAL | 429 | 326 | 323 | 47 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 408 | 308 | 307 | 46 | | + | | ::: | COMBINED | 429 | 326 | 323 | 47 | |
| - | | **//Human Herpesvirus 5//** | PHYSICAL | 119 | 82 | 94 | 26 | | + | | **//Human Herpesvirus 5//** | PHYSICAL | 125 | 87 | 99 | 27 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 119 | 82 | 94 | 26 | | + | | ::: | COMBINED | 125 | 87 | 99 | 27 | |
| | **//Human Herpesvirus 6A//** | PHYSICAL | 11 | 8 | 12 | 7 | | | **//Human Herpesvirus 6A//** | PHYSICAL | 11 | 8 | 12 | 7 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Human Herpesvirus 8//** | PHYSICAL | 777 | 692 | 715 | 41 | | + | | **//Human Herpesvirus 8//** | PHYSICAL | 779 | 693 | 716 | 42 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 777 | 692 | 715 | 41 | | + | | ::: | COMBINED | 779 | 693 | 716 | 42 | |
| | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 2,026 | 1,325 | 1,137 | 352 | | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 2,026 | 1,325 | 1,137 | 352 | | ||
| | ::: | GENETIC | 1 | 1 | 2 | 1 | | | ::: | GENETIC | 1 | 1 | 2 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Human papillomavirus (16)//** | PHYSICAL | 253 | 185 | 172 | 24 | | + | | **//Human papillomavirus (16)//** | PHYSICAL | 255 | 186 | 173 | 25 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 253 | 185 | 172 | 24 | | + | | ::: | COMBINED | 255 | 186 | 173 | 25 | |
| | **//Human papillomavirus (6b)//** | PHYSICAL | 20 | 20 | 22 | 2 | | | **//Human papillomavirus (6b)//** | PHYSICAL | 20 | 20 | 22 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 20 | 20 | 22 | 2 | | | ::: | COMBINED | 20 | 20 | 22 | 2 | | ||
| + | | **//Leishmania major (Friedlin)//** | PHYSICAL | 1 | 1 | 2 | 1 | | ||
| + | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| + | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| | **//Macaca mulatta//** | PHYSICAL | 22 | 13 | 15 | 13 | | | **//Macaca mulatta//** | PHYSICAL | 22 | 13 | 15 | 13 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 2 | 1 | | | ::: | COMBINED | 2 | 2 | 2 | 1 | | ||
| - | | **//Mus musculus//** | PHYSICAL | 47,053 | 40,702 | 13,306 | 3,968 | | + | | **//Mus musculus//** | PHYSICAL | 47,804 | 41,421 | 13,435 | 3,986 | |
| | ::: | GENETIC | 382 | 337 | 341 | 194 | | | ::: | GENETIC | 382 | 337 | 341 | 194 | | ||
| - | | ::: | COMBINED | 47,435 | 40,964 | 13,366 | 4,105 | | + | | ::: | COMBINED | 48,186 | 41,683 | 13,495 | 4,123 | |
| | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 12 | 10 | 13 | 3 | | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 12 | 10 | 13 | 3 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | ||
| - | | **//Rattus norvegicus//** | PHYSICAL | 7,779 | 6,628 | 4,159 | 1,158 | | + | | **//Rattus norvegicus//** | PHYSICAL | 7,798 | 6,639 | 4,166 | 1,162 | |
| | ::: | GENETIC | 19 | 19 | 31 | 12 | | | ::: | GENETIC | 19 | 19 | 31 | 12 | | ||
| - | | ::: | COMBINED | 7,798 | 6,638 | 4,169 | 1,161 | | + | | ::: | COMBINED | 7,817 | 6,649 | 4,176 | 1,165 | |
| | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 2 | 3 | 2 | | | ::: | COMBINED | 5 | 2 | 3 | 2 | | ||
| - | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 171,959 | 114,693 | 6,909 | 9,422 | | + | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 172,084 | 114,758 | 6,913 | 9,449 | |
| - | | ::: | GENETIC | 576,131 | 441,069 | 5,958 | 9,156 | | + | | ::: | GENETIC | 576,220 | 441,111 | 5,958 | 9,177 | |
| - | | ::: | COMBINED | 748,090 | 542,419 | 7,165 | 15,613 | | + | | ::: | COMBINED | 748,304 | 542,510 | 7,168 | 15,651 | |
| - | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 15,294 | 11,210 | 3,279 | 1,520 | | + | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 15,899 | 11,789 | 3,335 | 1,525 | |
| - | | ::: | GENETIC | 60,572 | 51,034 | 3,479 | 1,871 | | + | | ::: | GENETIC | 60,688 | 51,126 | 3,491 | 1,876 | |
| - | | ::: | COMBINED | 75,866 | 61,263 | 4,469 | 2,681 | | + | | ::: | COMBINED | 76,587 | 61,932 | 4,504 | 2,688 | |
| | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Xenopus laevis//** | PHYSICAL | 1,384 | 1,228 | 1,128 | 226 | | + | | **//Xenopus laevis//** | PHYSICAL | 1,406 | 1,244 | 1,140 | 228 | |
| | ::: | GENETIC | 7 | 7 | 10 | 3 | | | ::: | GENETIC | 7 | 7 | 10 | 3 | | ||
| - | | ::: | COMBINED | 1,391 | 1,235 | 1,138 | 229 | | + | | ::: | COMBINED | 1,413 | 1,251 | 1,150 | 231 | |
| | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 13 | 21 | 9 | | | ::: | COMBINED | 18 | 13 | 21 | 9 | | ||
| - | | **//All Organisms//** | PHYSICAL | 873,288 | 657,116 | 68,258 | 48,746 | | + | | **//All Organisms//** | PHYSICAL | 894,880 | 677,442 | 71,266 | 49,019 | |
| - | | ::: | GENETIC | 833,406 | 682,512 | 20,946 | 16,059 | | + | | ::: | GENETIC | 833,618 | 682,653 | 20,965 | 16,089 | |
| - | | ::: | COMBINED | 1,706,694 | 1,322,353 | 73,159 | 59,803 | | + | | ::: | COMBINED | 1,728,498 | 1,342,777 | 75,892 | 60,088 | |
| ===== Chemical Interaction Statistics ===== | ===== Chemical Interaction Statistics ===== | ||
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| | ::: | NEDDYLATION | 0 | 0 | 1,093 | 0 | 903 | 75 | | | ::: | NEDDYLATION | 0 | 0 | 1,093 | 0 | 903 | 75 | | ||
| | ::: | SUMOYLATION | 0 | 0 | 4,392 | 0 | 2,317 | 330 | | | ::: | SUMOYLATION | 0 | 0 | 4,392 | 0 | 2,317 | 330 | | ||
| - | | ::: | UBIQUITINATION | 557,255 | 292,806 | 39,038 | 50,371 | 10,466 | 3,117 | | + | | ::: | UBIQUITINATION | 705,673 | 383,699 | 39,038 | 54,962 | 11,895 | 3,118 | |
| - | | ::: | COMBINED | 557,255 | 292,806 | 45,249 | 50,371 | 10,703 | 3,407 | | + | | ::: | COMBINED | 705,673 | 383,699 | 45,249 | 54,962 | 12,022 | 3,408 | |
| | **//Human Herpesvirus 1//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | | **//Human Herpesvirus 1//** | SUMOYLATION | 0 | 0 | 1 | 0 | 1 | 1 | | ||
| | ::: | UBIQUITINATION | 0 | 0 | 4 | 0 | 3 | 4 | | | ::: | UBIQUITINATION | 0 | 0 | 4 | 0 | 3 | 4 | | ||
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| | ::: | PHOSPHORYLATION | 42,907 | 19,981 | 0 | 3,165 | 3,165 | 528 | | | ::: | PHOSPHORYLATION | 42,907 | 19,981 | 0 | 3,165 | 3,165 | 528 | | ||
| | ::: | SUMOYLATION | 0 | 0 | 5,898 | 0 | 3,195 | 433 | | | ::: | SUMOYLATION | 0 | 0 | 5,898 | 0 | 3,195 | 433 | | ||
| - | | ::: | UBIQUITINATION | 626,075 | 347,307 | 49,605 | 66,730 | 18,093 | 3,740 | | + | | ::: | UBIQUITINATION | 774,493 | 438,200 | 49,605 | 71,321 | 19,522 | 3,741 | |
| | ::: | UFMYLATION | 0 | 0 | 10 | 0 | 10 | 1 | | | ::: | UFMYLATION | 0 | 0 | 10 | 0 | 10 | 1 | | ||
| - | | ::: | COMBINED | 668,982 | 367,288 | 57,396 | 68,099 | 19,194 | 4,642 | | + | | ::: | COMBINED | 817,400 | 458,181 | 57,396 | 72,690 | 20,513 | 4,643 | |
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| ====== Previous Build Statistics ====== | ====== Previous Build Statistics ====== | ||
| ==== 2019 Updates ==== | ==== 2019 Updates ==== | ||
| + | * **[[Build 3.5.175]]** | ||
| * **[[Build 3.5.174]]** | * **[[Build 3.5.174]]** | ||
| * **[[Build 3.5.173]]** | * **[[Build 3.5.173]]** | ||