BioGRID Database Statistics
Differences
This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision Next revision | Previous revision Next revision Both sides next revision | ||
|
statistics [2019/02/01 00:27] biogridadmin |
statistics [2019/03/31 23:25] biogridadmin |
||
|---|---|---|---|
| Line 4: | Line 4: | ||
| * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | ||
| * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | ||
| - | ====== Current Build Statistics (3.5.169) - February 2019 ====== | + | ====== Current Build Statistics (3.5.171) - April 2019 ====== |
| ===== Physical and Genetic Interaction Statistics ===== | ===== Physical and Genetic Interaction Statistics ===== | ||
| Line 14: | Line 15: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,657 | 48,591 | 10,418 | 2,304 | | + | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,607 | 48,570 | 10,416 | 2,297 | |
| | ::: | GENETIC | 350 | 282 | 304 | 154 | | | ::: | GENETIC | 350 | 282 | 304 | 154 | | ||
| - | | ::: | COMBINED | 56,007 | 48,786 | 10,468 | 2,384 | | + | | ::: | COMBINED | 55,957 | 48,765 | 10,466 | 2,377 | |
| | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 3 | 2 | | | ::: | COMBINED | 2 | 2 | 3 | 2 | | ||
| - | | **//Bos taurus//** | PHYSICAL | 459 | 417 | 446 | 189 | | + | | **//Bos taurus//** | PHYSICAL | 471 | 423 | 451 | 190 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 459 | 417 | 446 | 189 | | + | | ::: | COMBINED | 471 | 423 | 451 | 190 | |
| - | | **//Caenorhabditis elegans//** | PHYSICAL | 6,354 | 5,807 | 3,281 | 195 | | + | | **//Caenorhabditis elegans//** | PHYSICAL | 6,360 | 5,808 | 3,281 | 196 | |
| | ::: | GENETIC | 2,336 | 2,269 | 1,130 | 34 | | | ::: | GENETIC | 2,336 | 2,269 | 1,130 | 34 | | ||
| - | | ::: | COMBINED | 8,690 | 8,053 | 3,954 | 213 | | + | | ::: | COMBINED | 8,696 | 8,054 | 3,954 | 214 | |
| - | | **//Candida albicans (SC5314)//** | PHYSICAL | 929 | 733 | 584 | 142 | | + | | **//Candida albicans (SC5314)//** | PHYSICAL | 931 | 735 | 586 | 144 | |
| | ::: | GENETIC | 306 | 293 | 303 | 28 | | | ::: | GENETIC | 306 | 293 | 303 | 28 | | ||
| - | | ::: | COMBINED | 1,235 | 1,013 | 809 | 154 | | + | | ::: | COMBINED | 1,237 | 1,015 | 811 | 156 | |
| - | | **//Canis familiaris//** | PHYSICAL | 46 | 35 | 53 | 24 | | + | | **//Canis familiaris//** | PHYSICAL | 137 | 125 | 142 | 25 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 46 | 35 | 53 | 24 | | + | | ::: | COMBINED | 137 | 125 | 142 | 25 | |
| | **//Cavia porcellus//** | PHYSICAL | 7 | 5 | 9 | 5 | | | **//Cavia porcellus//** | PHYSICAL | 7 | 5 | 9 | 5 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 41: | Line 42: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 11 | 9 | 14 | 5 | | | ::: | COMBINED | 11 | 9 | 14 | 5 | | ||
| - | | **//Cricetulus griseus//** | PHYSICAL | 24 | 24 | 32 | 8 | | + | | **//Cricetulus griseus//** | PHYSICAL | 54 | 54 | 63 | 9 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 24 | 24 | 32 | 8 | | + | | ::: | COMBINED | 54 | 54 | 63 | 9 | |
| | **//Danio rerio//** | PHYSICAL | 223 | 196 | 192 | 39 | | | **//Danio rerio//** | PHYSICAL | 223 | 196 | 192 | 39 | | ||
| | ::: | GENETIC | 70 | 64 | 65 | 30 | | | ::: | GENETIC | 70 | 64 | 65 | 30 | | ||
| Line 50: | Line 51: | ||
| | ::: | GENETIC | 6 | 6 | 8 | 2 | | | ::: | GENETIC | 6 | 6 | 8 | 2 | | ||
| | ::: | COMBINED | 30 | 20 | 24 | 8 | | | ::: | COMBINED | 30 | 20 | 24 | 8 | | ||
| - | | **//Drosophila melanogaster//** | PHYSICAL | 62,181 | 52,375 | 9,001 | 3,687 | | + | | **//Drosophila melanogaster//** | PHYSICAL | 62,204 | 52,402 | 9,001 | 3,684 | |
| - | | ::: | GENETIC | 14,477 | 10,140 | 3,146 | 4,395 | | + | | ::: | GENETIC | 14,475 | 10,140 | 3,146 | 4,394 | |
| - | | ::: | COMBINED | 76,658 | 61,163 | 9,338 | 7,157 | | + | | ::: | COMBINED | 76,679 | 61,190 | 9,338 | 7,153 | |
| | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | ||
| | ::: | GENETIC | 6 | 5 | 7 | 3 | | | ::: | GENETIC | 6 | 5 | 7 | 3 | | ||
| Line 65: | Line 66: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 9 | 9 | 10 | 2 | | | ::: | COMBINED | 9 | 9 | 10 | 2 | | ||
| - | | **//Escherichia coli (K12/MG1655)//** | PHYSICAL | 113 | 109 | 116 | 23 | | + | | **//Escherichia coli (K12/MG1655)//** | PHYSICAL | 114 | 110 | 118 | 24 | |
| | ::: | GENETIC | 26 | 25 | 36 | 12 | | | ::: | GENETIC | 26 | 25 | 36 | 12 | | ||
| - | | ::: | COMBINED | 139 | 133 | 150 | 35 | | + | | ::: | COMBINED | 140 | 134 | 152 | 36 | |
| | **//Escherichia coli (K12/W3110)//** | PHYSICAL | 12,804 | 12,801 | 2,045 | 3 | | | **//Escherichia coli (K12/W3110)//** | PHYSICAL | 12,804 | 12,801 | 2,045 | 3 | | ||
| | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | ||
| | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | ||
| - | | **//Gallus gallus//** | PHYSICAL | 496 | 422 | 396 | 89 | | + | | **//Gallus gallus//** | PHYSICAL | 499 | 424 | 398 | 91 | |
| | ::: | GENETIC | 13 | 10 | 15 | 10 | | | ::: | GENETIC | 13 | 10 | 15 | 10 | | ||
| - | | ::: | COMBINED | 509 | 431 | 404 | 98 | | + | | ::: | COMBINED | 512 | 433 | 406 | 100 | |
| | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 46 | 40 | 45 | 8 | | | ::: | COMBINED | 46 | 40 | 45 | 8 | | ||
| - | | **//Hepatitus C Virus//** | PHYSICAL | 192 | 131 | 133 | 33 | | + | | **//Hepatitus C Virus//** | PHYSICAL | 197 | 133 | 135 | 34 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 192 | 131 | 133 | 33 | | + | | ::: | COMBINED | 197 | 133 | 135 | 34 | |
| - | | **//Homo sapiens//** | PHYSICAL | 486,009 | 360,538 | 23,070 | 28,755 | | + | | **//Homo sapiens//** | PHYSICAL | 494,271 | 367,036 | 23,200 | 29,169 | |
| - | | ::: | GENETIC | 5,299 | 5,218 | 2,196 | 327 | | + | | ::: | GENETIC | 7,508 | 7,420 | 2,435 | 330 | |
| - | | ::: | COMBINED | 491,308 | 365,293 | 23,373 | 28,883 | | + | | ::: | COMBINED | 501,779 | 373,866 | 23,505 | 29,299 | |
| - | | **//Human Herpesvirus 1//** | PHYSICAL | 253 | 192 | 171 | 47 | | + | | **//Human Herpesvirus 1//** | PHYSICAL | 265 | 204 | 173 | 48 | |
| | ::: | GENETIC | 6 | 6 | 7 | 1 | | | ::: | GENETIC | 6 | 6 | 7 | 1 | | ||
| - | | ::: | COMBINED | 259 | 197 | 176 | 47 | | + | | ::: | COMBINED | 271 | 209 | 178 | 48 | |
| | **//Human Herpesvirus 2//** | PHYSICAL | 6 | 4 | 7 | 4 | | | **//Human Herpesvirus 2//** | PHYSICAL | 6 | 4 | 7 | 4 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 6 | 4 | 7 | 4 | | | ::: | COMBINED | 6 | 4 | 7 | 4 | | ||
| - | | **//Human Herpesvirus 3//** | PHYSICAL | 4 | 2 | 4 | 2 | | + | | **//Human Herpesvirus 3//** | PHYSICAL | 5 | 3 | 6 | 3 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 4 | 2 | 4 | 2 | | + | | ::: | COMBINED | 5 | 3 | 6 | 3 | |
| - | | **//Human Herpesvirus 4//** | PHYSICAL | 402 | 305 | 304 | 44 | | + | | **//Human Herpesvirus 4//** | PHYSICAL | 404 | 307 | 306 | 45 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 402 | 305 | 304 | 44 | | + | | ::: | COMBINED | 404 | 307 | 306 | 45 | |
| - | | **//Human Herpesvirus 5//** | PHYSICAL | 116 | 81 | 93 | 23 | | + | | **//Human Herpesvirus 5//** | PHYSICAL | 117 | 81 | 93 | 24 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 116 | 81 | 93 | 23 | | + | | ::: | COMBINED | 117 | 81 | 93 | 24 | |
| - | | **//Human Herpesvirus 6A//** | PHYSICAL | 10 | 7 | 11 | 6 | | + | | **//Human Herpesvirus 6A//** | PHYSICAL | 11 | 8 | 12 | 7 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 10 | 7 | 11 | 6 | | + | | ::: | COMBINED | 11 | 8 | 12 | 7 | |
| | **//Human Herpesvirus 6B//** | PHYSICAL | 4 | 4 | 7 | 3 | | | **//Human Herpesvirus 6B//** | PHYSICAL | 4 | 4 | 7 | 3 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 110: | Line 111: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 770 | 690 | 715 | 40 | | | ::: | COMBINED | 770 | 690 | 715 | 40 | | ||
| - | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 1,988 | 1,312 | 1,124 | 344 | | + | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 1,989 | 1,313 | 1,125 | 345 | |
| | ::: | GENETIC | 1 | 1 | 2 | 1 | | | ::: | GENETIC | 1 | 1 | 2 | 1 | | ||
| - | | ::: | COMBINED | 1,989 | 1,312 | 1,124 | 345 | | + | | ::: | COMBINED | 1,990 | 1,313 | 1,125 | 346 | |
| | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 20 | 12 | 16 | 11 | | | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 20 | 12 | 16 | 11 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 119: | Line 120: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Human papillomavirus (16)//** | PHYSICAL | 211 | 164 | 150 | 12 | | + | | **//Human papillomavirus (16)//** | PHYSICAL | 233 | 173 | 158 | 18 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 211 | 164 | 150 | 12 | | + | | ::: | COMBINED | 233 | 173 | 158 | 18 | |
| | **//Human papillomavirus (6b)//** | PHYSICAL | 19 | 19 | 21 | 1 | | | **//Human papillomavirus (6b)//** | PHYSICAL | 19 | 19 | 21 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 131: | Line 132: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 2 | 1 | | | ::: | COMBINED | 2 | 2 | 2 | 1 | | ||
| - | | **//Mus musculus//** | PHYSICAL | 45,589 | 39,426 | 13,140 | 3,857 | | + | | **//Mus musculus//** | PHYSICAL | 46,365 | 40,144 | 13,210 | 3,902 | |
| | ::: | GENETIC | 378 | 333 | 337 | 193 | | | ::: | GENETIC | 378 | 333 | 337 | 193 | | ||
| - | | ::: | COMBINED | 45,967 | 39,686 | 13,199 | 3,993 | | + | | ::: | COMBINED | 46,743 | 40,404 | 13,269 | 4,038 | |
| - | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 11 | 9 | 11 | 2 | | + | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 12 | 10 | 13 | 3 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 11 | 9 | 11 | 2 | | + | | ::: | COMBINED | 12 | 10 | 13 | 3 | |
| | **//Neurospora crassa (OR74A)//** | PHYSICAL | 11 | 10 | 12 | 2 | | | **//Neurospora crassa (OR74A)//** | PHYSICAL | 11 | 10 | 12 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 161: | Line 162: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | ||
| - | | **//Rattus norvegicus//** | PHYSICAL | 6,949 | 5,865 | 3,870 | 1,126 | | + | | **//Rattus norvegicus//** | PHYSICAL | 7,084 | 5,992 | 3,962 | 1,139 | |
| | ::: | GENETIC | 19 | 19 | 31 | 12 | | | ::: | GENETIC | 19 | 19 | 31 | 12 | | ||
| - | | ::: | COMBINED | 6,968 | 5,875 | 3,880 | 1,129 | | + | | ::: | COMBINED | 7,103 | 6,002 | 3,972 | 1,142 | |
| | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 2 | 3 | 2 | | | ::: | COMBINED | 5 | 2 | 3 | 2 | | ||
| - | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 167,453 | 111,458 | 6,902 | 9,231 | | + | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 168,432 | 112,195 | 6,902 | 9,284 | |
| - | | ::: | GENETIC | 573,370 | 439,469 | 5,957 | 8,984 | | + | | ::: | GENETIC | 573,603 | 439,566 | 5,957 | 9,031 | |
| - | | ::: | COMBINED | 740,823 | 537,912 | 7,161 | 15,326 | | + | | ::: | COMBINED | 742,035 | 538,624 | 7,161 | 15,400 | |
| - | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 13,927 | 10,074 | 3,080 | 1,456 | | + | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 14,237 | 10,373 | 3,158 | 1,456 | |
| - | | ::: | GENETIC | 60,108 | 50,669 | 3,429 | 1,787 | | + | | ::: | GENETIC | 60,107 | 50,665 | 3,429 | 1,787 | |
| - | | ::: | COMBINED | 74,035 | 59,796 | 4,373 | 2,564 | | + | | ::: | COMBINED | 74,344 | 60,089 | 4,407 | 2,564 | |
| | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
| Line 206: | Line 207: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Xenopus laevis//** | PHYSICAL | 1,381 | 1,226 | 1,125 | 224 | | + | | **//Xenopus laevis//** | PHYSICAL | 1,383 | 1,227 | 1,127 | 225 | |
| | ::: | GENETIC | 7 | 7 | 10 | 3 | | | ::: | GENETIC | 7 | 7 | 10 | 3 | | ||
| - | | ::: | COMBINED | 1,388 | 1,233 | 1,135 | 227 | | + | | ::: | COMBINED | 1,390 | 1,234 | 1,137 | 228 | |
| | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 13 | 21 | 9 | | | ::: | COMBINED | 18 | 13 | 21 | 9 | | ||
| - | | **//All Organisms//** | PHYSICAL | 836,570 | 627,790 | 65,925 | 47,499 | | + | | **//All Organisms//** | PHYSICAL | 846,885 | 636,059 | 66,254 | 47,984 | |
| - | | ::: | GENETIC | 827,456 | 677,892 | 20,346 | 15,793 | | + | | ::: | GENETIC | 829,895 | 680,187 | 20,585 | 15,842 | |
| - | | ::: | COMBINED | 1,664,026 | 1,288,948 | 70,842 | 58,405 | | + | | ::: | COMBINED | 1,676,780 | 1,299,261 | 71,129 | 58,912 | |
| ===== Chemical Interaction Statistics ===== | ===== Chemical Interaction Statistics ===== | ||
| Line 323: | Line 324: | ||
| ====== Previous Build Statistics ====== | ====== Previous Build Statistics ====== | ||
| ==== 2019 Updates ==== | ==== 2019 Updates ==== | ||
| + | * **[[Build 3.5.171]]** | ||
| + | * **[[Build 3.5.170]]** | ||
| * **[[Build 3.5.169]]** | * **[[Build 3.5.169]]** | ||
| * **[[Build 3.5.168]]** | * **[[Build 3.5.168]]** | ||