BioGRID Database Statistics
Differences
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statistics [2018/11/01 00:53] biogridadmin |
statistics [2018/12/19 11:34] biogridadmin |
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| * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | ||
| * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | ||
| - | ====== Current Build Statistics (3.4.166) - November 2018 ====== | + | ====== Current Build Statistics (3.5.167) - December 2018 ====== |
| ===== Physical and Genetic Interaction Statistics ===== | ===== Physical and Genetic Interaction Statistics ===== | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 42,636 | 35,897 | 9,572 | 2,284 | | + | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,655 | 48,589 | 10,418 | 2,303 | |
| | ::: | GENETIC | 350 | 282 | 304 | 154 | | | ::: | GENETIC | 350 | 282 | 304 | 154 | | ||
| - | | ::: | COMBINED | 42,986 | 36,092 | 9,627 | 2,364 | | + | | ::: | COMBINED | 56,005 | 48,784 | 10,468 | 2,383 | |
| | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 3 | 2 | | | ::: | COMBINED | 2 | 2 | 3 | 2 | | ||
| - | | **//Bos taurus//** | PHYSICAL | 454 | 414 | 441 | 186 | | + | | **//Bos taurus//** | PHYSICAL | 456 | 415 | 443 | 187 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 454 | 414 | 441 | 186 | | + | | ::: | COMBINED | 456 | 415 | 443 | 187 | |
| - | | **//Caenorhabditis elegans//** | PHYSICAL | 6,352 | 5,806 | 3,281 | 194 | | + | | **//Caenorhabditis elegans//** | PHYSICAL | 6,352 | 5,806 | 3,280 | 194 | |
| | ::: | GENETIC | 2,336 | 2,269 | 1,130 | 34 | | | ::: | GENETIC | 2,336 | 2,269 | 1,130 | 34 | | ||
| - | | ::: | COMBINED | 8,688 | 8,052 | 3,954 | 212 | | + | | ::: | COMBINED | 8,688 | 8,052 | 3,953 | 212 | |
| - | | **//Candida albicans (SC5314)//** | PHYSICAL | 806 | 618 | 500 | 129 | | + | | **//Candida albicans (SC5314)//** | PHYSICAL | 819 | 627 | 506 | 136 | |
| - | | ::: | GENETIC | 301 | 289 | 300 | 26 | | + | | ::: | GENETIC | 306 | 293 | 303 | 28 | |
| - | | ::: | COMBINED | 1,107 | 894 | 732 | 141 | | + | | ::: | COMBINED | 1,125 | 907 | 738 | 148 | |
| | **//Canis familiaris//** | PHYSICAL | 46 | 35 | 53 | 24 | | | **//Canis familiaris//** | PHYSICAL | 46 | 35 | 53 | 24 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 24 | 24 | 32 | 8 | | | ::: | COMBINED | 24 | 24 | 32 | 8 | | ||
| - | | **//Danio rerio//** | PHYSICAL | 222 | 195 | 190 | 38 | | + | | **//Danio rerio//** | PHYSICAL | 223 | 196 | 192 | 39 | |
| | ::: | GENETIC | 70 | 64 | 65 | 30 | | | ::: | GENETIC | 70 | 64 | 65 | 30 | | ||
| - | | ::: | COMBINED | 292 | 256 | 248 | 67 | | + | | ::: | COMBINED | 293 | 257 | 250 | 68 | |
| | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 24 | 17 | 20 | 7 | | | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 24 | 17 | 20 | 7 | | ||
| | ::: | GENETIC | 6 | 6 | 8 | 2 | | | ::: | GENETIC | 6 | 6 | 8 | 2 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 191 | 130 | 132 | 32 | | | ::: | COMBINED | 191 | 130 | 132 | 32 | | ||
| - | | **//Homo sapiens//** | PHYSICAL | 464,433 | 343,695 | 22,866 | 28,125 | | + | | **//Homo sapiens//** | PHYSICAL | 477,251 | 353,521 | 22,947 | 28,364 | |
| - | | ::: | GENETIC | 5,287 | 5,209 | 2,188 | 323 | | + | | ::: | GENETIC | 5,289 | 5,211 | 2,190 | 324 | |
| - | | ::: | COMBINED | 469,720 | 348,444 | 23,172 | 28,249 | | + | | ::: | COMBINED | 482,540 | 358,269 | 23,252 | 28,489 | |
| | **//Human Herpesvirus 1//** | PHYSICAL | 253 | 192 | 171 | 47 | | | **//Human Herpesvirus 1//** | PHYSICAL | 253 | 192 | 171 | 47 | | ||
| | ::: | GENETIC | 6 | 6 | 7 | 1 | | | ::: | GENETIC | 6 | 6 | 7 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 769 | 689 | 714 | 39 | | | ::: | COMBINED | 769 | 689 | 714 | 39 | | ||
| - | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 1,977 | 1,307 | 1,121 | 341 | | + | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 1,979 | 1,309 | 1,123 | 342 | |
| | ::: | GENETIC | 1 | 1 | 2 | 1 | | | ::: | GENETIC | 1 | 1 | 2 | 1 | | ||
| - | | ::: | COMBINED | 1,978 | 1,307 | 1,121 | 342 | | + | | ::: | COMBINED | 1,980 | 1,309 | 1,123 | 343 | |
| | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 20 | 12 | 16 | 11 | | | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 20 | 12 | 16 | 11 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Human papillomavirus (16)//** | PHYSICAL | 209 | 163 | 149 | 11 | | + | | **//Human papillomavirus (16)//** | PHYSICAL | 211 | 164 | 150 | 12 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 209 | 163 | 149 | 11 | | + | | ::: | COMBINED | 211 | 164 | 150 | 12 | |
| | **//Human papillomavirus (6b)//** | PHYSICAL | 19 | 19 | 21 | 1 | | | **//Human papillomavirus (6b)//** | PHYSICAL | 19 | 19 | 21 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 2 | 1 | | | ::: | COMBINED | 2 | 2 | 2 | 1 | | ||
| - | | **//Mus musculus//** | PHYSICAL | 44,763 | 38,750 | 12,996 | 3,796 | | + | | **//Mus musculus//** | PHYSICAL | 45,302 | 39,258 | 13,109 | 3,817 | |
| | ::: | GENETIC | 377 | 332 | 336 | 192 | | | ::: | GENETIC | 377 | 332 | 336 | 192 | | ||
| - | | ::: | COMBINED | 45,140 | 39,009 | 13,056 | 3,931 | | + | | ::: | COMBINED | 45,679 | 39,517 | 13,168 | 3,952 | |
| | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 11 | 9 | 11 | 2 | | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 11 | 9 | 11 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | ||
| - | | **//Rattus norvegicus//** | PHYSICAL | 6,333 | 5,291 | 3,725 | 1,099 | | + | | **//Rattus norvegicus//** | PHYSICAL | 6,876 | 5,816 | 3,852 | 1,107 | |
| | ::: | GENETIC | 19 | 19 | 31 | 12 | | | ::: | GENETIC | 19 | 19 | 31 | 12 | | ||
| - | | ::: | COMBINED | 6,352 | 5,301 | 3,735 | 1,102 | | + | | ::: | COMBINED | 6,895 | 5,826 | 3,862 | 1,110 | |
| | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 2 | 3 | 2 | | | ::: | COMBINED | 5 | 2 | 3 | 2 | | ||
| - | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 165,206 | 109,927 | 6,900 | 9,159 | | + | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 165,268 | 109,953 | 6,900 | 9,172 | |
| - | | ::: | GENETIC | 573,152 | 439,368 | 5,957 | 8,939 | | + | | ::: | GENETIC | 573,170 | 439,375 | 5,957 | 8,946 | |
| - | | ::: | COMBINED | 738,358 | 536,426 | 7,159 | 15,231 | | + | | ::: | COMBINED | 738,438 | 536,456 | 7,159 | 15,248 | |
| | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 13,136 | 9,575 | 2,987 | 1,339 | | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 13,136 | 9,575 | 2,987 | 1,339 | | ||
| - | | ::: | GENETIC | 59,061 | 50,031 | 3,376 | 1,555 | | + | | ::: | GENETIC | 59,070 | 50,037 | 3,376 | 1,556 | |
| - | | ::: | COMBINED | 72,197 | 58,750 | 4,321 | 2,301 | | + | | ::: | COMBINED | 72,206 | 58,755 | 4,321 | 2,302 | |
| | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Xenopus laevis//** | PHYSICAL | 1,377 | 1,222 | 1,121 | 223 | | + | | **//Xenopus laevis//** | PHYSICAL | 1,381 | 1,226 | 1,125 | 224 | |
| | ::: | GENETIC | 7 | 7 | 10 | 3 | | | ::: | GENETIC | 7 | 7 | 10 | 3 | | ||
| - | | ::: | COMBINED | 1,384 | 1,229 | 1,131 | 226 | | + | | ::: | COMBINED | 1,388 | 1,233 | 1,135 | 227 | |
| | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 13 | 21 | 9 | | | ::: | COMBINED | 18 | 13 | 21 | 9 | | ||
| - | | **//All Organisms//** | PHYSICAL | 797,467 | 594,931 | 64,466 | 46,632 | | + | | **//All Organisms//** | PHYSICAL | 824,395 | 618,467 | 65,600 | 46,913 | |
| - | | ::: | GENETIC | 826,178 | 677,141 | 20,284 | 15,511 | | + | | ::: | GENETIC | 826,212 | 677,160 | 20,289 | 15,522 | |
| - | | ::: | COMBINED | 1,623,645 | 1,255,578 | 69,440 | 57,366 | | + | | ::: | COMBINED | 1,650,607 | 1,279,126 | 70,567 | 57,653 | |
| ===== Chemical Interaction Statistics ===== | ===== Chemical Interaction Statistics ===== | ||
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| | ::: | UFMYLATION | 0 | 0 | 10 | 0 | 10 | 1 | | | ::: | UFMYLATION | 0 | 0 | 10 | 0 | 10 | 1 | | ||
| | ::: | COMBINED | 668,982 | 367,288 | 57,396 | 68,099 | 19,194 | 4,642 | | | ::: | COMBINED | 668,982 | 367,288 | 57,396 | 68,099 | 19,194 | 4,642 | | ||
| + | |||
| **Note:** Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions. | **Note:** Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions. | ||
| ====== Previous Build Statistics ====== | ====== Previous Build Statistics ====== | ||
| ==== 2018 Updates ==== | ==== 2018 Updates ==== | ||
| + | * **[[Build 3.5.167]]** | ||
| * **[[Build 3.5.166]]** | * **[[Build 3.5.166]]** | ||
| * **[[Build 3.5.165]]** | * **[[Build 3.5.165]]** | ||