BioGRID Database Statistics
Differences
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statistics [2018/09/24 22:49] biogridadmin |
statistics [2018/12/19 11:34] biogridadmin |
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| * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | ||
| * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | ||
| - | ====== Current Build Statistics (3.4.165) - October 2018 ====== | + | ====== Current Build Statistics (3.5.167) - December 2018 ====== |
| ===== Physical and Genetic Interaction Statistics ===== | ===== Physical and Genetic Interaction Statistics ===== | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 42,635 | 35,896 | 9,571 | 2,283 | | + | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,655 | 48,589 | 10,418 | 2,303 | |
| | ::: | GENETIC | 350 | 282 | 304 | 154 | | | ::: | GENETIC | 350 | 282 | 304 | 154 | | ||
| - | | ::: | COMBINED | 42,985 | 36,091 | 9,626 | 2,363 | | + | | ::: | COMBINED | 56,005 | 48,784 | 10,468 | 2,383 | |
| | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 3 | 2 | | | ::: | COMBINED | 2 | 2 | 3 | 2 | | ||
| - | | **//Bos taurus//** | PHYSICAL | 452 | 412 | 439 | 185 | | + | | **//Bos taurus//** | PHYSICAL | 456 | 415 | 443 | 187 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 452 | 412 | 439 | 185 | | + | | ::: | COMBINED | 456 | 415 | 443 | 187 | |
| - | | **//Caenorhabditis elegans//** | PHYSICAL | 6,350 | 5,805 | 3,281 | 193 | | + | | **//Caenorhabditis elegans//** | PHYSICAL | 6,352 | 5,806 | 3,280 | 194 | |
| | ::: | GENETIC | 2,336 | 2,269 | 1,130 | 34 | | | ::: | GENETIC | 2,336 | 2,269 | 1,130 | 34 | | ||
| - | | ::: | COMBINED | 8,686 | 8,051 | 3,954 | 211 | | + | | ::: | COMBINED | 8,688 | 8,052 | 3,953 | 212 | |
| - | | **//Candida albicans (SC5314)//** | PHYSICAL | 797 | 611 | 496 | 127 | | + | | **//Candida albicans (SC5314)//** | PHYSICAL | 819 | 627 | 506 | 136 | |
| - | | ::: | GENETIC | 300 | 288 | 298 | 25 | | + | | ::: | GENETIC | 306 | 293 | 303 | 28 | |
| - | | ::: | COMBINED | 1,097 | 886 | 726 | 138 | | + | | ::: | COMBINED | 1,125 | 907 | 738 | 148 | |
| | **//Canis familiaris//** | PHYSICAL | 46 | 35 | 53 | 24 | | | **//Canis familiaris//** | PHYSICAL | 46 | 35 | 53 | 24 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 17 | 16 | 19 | 4 | | | ::: | COMBINED | 17 | 16 | 19 | 4 | | ||
| - | | **//Chlorocebus sabaeus//** | PHYSICAL | 9 | 7 | 11 | 4 | | + | | **//Chlorocebus sabaeus//** | PHYSICAL | 11 | 9 | 14 | 5 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 9 | 7 | 11 | 4 | | + | | ::: | COMBINED | 11 | 9 | 14 | 5 | |
| | **//Cricetulus griseus//** | PHYSICAL | 24 | 24 | 32 | 8 | | | **//Cricetulus griseus//** | PHYSICAL | 24 | 24 | 32 | 8 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 24 | 24 | 32 | 8 | | | ::: | COMBINED | 24 | 24 | 32 | 8 | | ||
| - | | **//Danio rerio//** | PHYSICAL | 220 | 194 | 189 | 37 | | + | | **//Danio rerio//** | PHYSICAL | 223 | 196 | 192 | 39 | |
| | ::: | GENETIC | 70 | 64 | 65 | 30 | | | ::: | GENETIC | 70 | 64 | 65 | 30 | | ||
| - | | ::: | COMBINED | 290 | 255 | 247 | 66 | | + | | ::: | COMBINED | 293 | 257 | 250 | 68 | |
| | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 24 | 17 | 20 | 7 | | | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 24 | 17 | 20 | 7 | | ||
| | ::: | GENETIC | 6 | 6 | 8 | 2 | | | ::: | GENETIC | 6 | 6 | 8 | 2 | | ||
| | ::: | COMBINED | 30 | 20 | 24 | 8 | | | ::: | COMBINED | 30 | 20 | 24 | 8 | | ||
| - | | **//Drosophila melanogaster//** | PHYSICAL | 54,593 | 47,071 | 8,855 | 2,792 | | + | | **//Drosophila melanogaster//** | PHYSICAL | 62,181 | 52,375 | 9,001 | 3,687 | |
| - | | ::: | GENETIC | 13,440 | 9,412 | 2,958 | 4,156 | | + | | ::: | GENETIC | 14,476 | 10,139 | 3,145 | 4,394 | |
| - | | ::: | COMBINED | 68,033 | 55,350 | 9,197 | 6,204 | | + | | ::: | COMBINED | 76,657 | 61,162 | 9,338 | 7,156 | |
| | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | ||
| | ::: | GENETIC | 6 | 5 | 7 | 3 | | | ::: | GENETIC | 6 | 5 | 7 | 3 | | ||
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| | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | ||
| | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | ||
| - | | **//Gallus gallus//** | PHYSICAL | 483 | 412 | 382 | 83 | | + | | **//Gallus gallus//** | PHYSICAL | 488 | 416 | 388 | 86 | |
| | ::: | GENETIC | 13 | 10 | 15 | 10 | | | ::: | GENETIC | 13 | 10 | 15 | 10 | | ||
| - | | ::: | COMBINED | 496 | 421 | 391 | 92 | | + | | ::: | COMBINED | 501 | 425 | 396 | 95 | |
| | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 46 | 40 | 45 | 8 | | | ::: | COMBINED | 46 | 40 | 45 | 8 | | ||
| - | | **//Hepatitus C Virus//** | PHYSICAL | 188 | 129 | 131 | 31 | | + | | **//Hepatitus C Virus//** | PHYSICAL | 191 | 130 | 132 | 32 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 188 | 129 | 131 | 31 | | + | | ::: | COMBINED | 191 | 130 | 132 | 32 | |
| - | | **//Homo sapiens//** | PHYSICAL | 457,329 | 338,301 | 22,821 | 27,795 | | + | | **//Homo sapiens//** | PHYSICAL | 477,251 | 353,521 | 22,947 | 28,364 | |
| - | | ::: | GENETIC | 5,287 | 5,209 | 2,188 | 323 | | + | | ::: | GENETIC | 5,289 | 5,211 | 2,190 | 324 | |
| - | | ::: | COMBINED | 462,616 | 343,061 | 23,127 | 27,919 | | + | | ::: | COMBINED | 482,540 | 358,269 | 23,252 | 28,489 | |
| - | | **//Human Herpesvirus 1//** | PHYSICAL | 248 | 190 | 169 | 45 | | + | | **//Human Herpesvirus 1//** | PHYSICAL | 253 | 192 | 171 | 47 | |
| | ::: | GENETIC | 6 | 6 | 7 | 1 | | | ::: | GENETIC | 6 | 6 | 7 | 1 | | ||
| - | | ::: | COMBINED | 254 | 195 | 174 | 45 | | + | | ::: | COMBINED | 259 | 197 | 176 | 47 | |
| | **//Human Herpesvirus 2//** | PHYSICAL | 6 | 4 | 7 | 4 | | | **//Human Herpesvirus 2//** | PHYSICAL | 6 | 4 | 7 | 4 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 4 | 2 | 4 | 2 | | | ::: | COMBINED | 4 | 2 | 4 | 2 | | ||
| - | | **//Human Herpesvirus 4//** | PHYSICAL | 321 | 235 | 240 | 40 | | + | | **//Human Herpesvirus 4//** | PHYSICAL | 323 | 236 | 241 | 41 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 321 | 235 | 240 | 40 | | + | | ::: | COMBINED | 323 | 236 | 241 | 41 | |
| | **//Human Herpesvirus 5//** | PHYSICAL | 115 | 80 | 91 | 22 | | | **//Human Herpesvirus 5//** | PHYSICAL | 115 | 80 | 91 | 22 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 769 | 689 | 714 | 39 | | | ::: | COMBINED | 769 | 689 | 714 | 39 | | ||
| - | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 1,974 | 1,306 | 1,121 | 339 | | + | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 1,979 | 1,309 | 1,123 | 342 | |
| | ::: | GENETIC | 1 | 1 | 2 | 1 | | | ::: | GENETIC | 1 | 1 | 2 | 1 | | ||
| - | | ::: | COMBINED | 1,975 | 1,306 | 1,121 | 340 | | + | | ::: | COMBINED | 1,980 | 1,309 | 1,123 | 343 | |
| | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 20 | 12 | 16 | 11 | | | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 20 | 12 | 16 | 11 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 20 | 12 | 16 | 11 | | | ::: | COMBINED | 20 | 12 | 16 | 11 | | ||
| - | | **//Human papillomavirus (16)//** | PHYSICAL | 27 | 12 | 14 | 9 | | + | | **//Human papillomavirus (10)//** | PHYSICAL | 1 | 1 | 2 | 1 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 27 | 12 | 14 | 9 | | + | | ::: | COMBINED | 1 | 1 | 2 | 1 | |
| + | | **//Human papillomavirus (16)//** | PHYSICAL | 211 | 164 | 150 | 12 | | ||
| + | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| + | | ::: | COMBINED | 211 | 164 | 150 | 12 | | ||
| + | | **//Human papillomavirus (6b)//** | PHYSICAL | 19 | 19 | 21 | 1 | | ||
| + | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| + | | ::: | COMBINED | 19 | 19 | 21 | 1 | | ||
| | **//Macaca mulatta//** | PHYSICAL | 22 | 13 | 15 | 13 | | | **//Macaca mulatta//** | PHYSICAL | 22 | 13 | 15 | 13 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 2 | 1 | | | ::: | COMBINED | 2 | 2 | 2 | 1 | | ||
| - | | **//Mus musculus//** | PHYSICAL | 44,618 | 38,634 | 12,961 | 3,757 | | + | | **//Mus musculus//** | PHYSICAL | 45,302 | 39,258 | 13,109 | 3,817 | |
| | ::: | GENETIC | 377 | 332 | 336 | 192 | | | ::: | GENETIC | 377 | 332 | 336 | 192 | | ||
| - | | ::: | COMBINED | 44,995 | 38,893 | 13,021 | 3,892 | | + | | ::: | COMBINED | 45,679 | 39,517 | 13,168 | 3,952 | |
| | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 11 | 9 | 11 | 2 | | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 11 | 9 | 11 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 3 | 2 | 2 | 1 | | | ::: | COMBINED | 3 | 2 | 2 | 1 | | ||
| - | | **//Oryctolagus cuniculus//** | PHYSICAL | 311 | 278 | 283 | 61 | | + | | **//Oryctolagus cuniculus//** | PHYSICAL | 313 | 280 | 285 | 62 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 311 | 278 | 283 | 61 | | + | | ::: | COMBINED | 313 | 280 | 285 | 62 | |
| | **//Oryza sativa (Japonica)//** | PHYSICAL | 108 | 92 | 75 | 19 | | | **//Oryza sativa (Japonica)//** | PHYSICAL | 108 | 92 | 75 | 19 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | ||
| - | | **//Rattus norvegicus//** | PHYSICAL | 6,307 | 5,272 | 3,708 | 1,093 | | + | | **//Rattus norvegicus//** | PHYSICAL | 6,876 | 5,816 | 3,852 | 1,107 | |
| | ::: | GENETIC | 19 | 19 | 31 | 12 | | | ::: | GENETIC | 19 | 19 | 31 | 12 | | ||
| - | | ::: | COMBINED | 6,326 | 5,282 | 3,718 | 1,096 | | + | | ::: | COMBINED | 6,895 | 5,826 | 3,862 | 1,110 | |
| | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 2 | 3 | 2 | | | ::: | COMBINED | 5 | 2 | 3 | 2 | | ||
| - | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 164,992 | 109,759 | 6,899 | 9,147 | | + | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 165,268 | 109,953 | 6,900 | 9,172 | |
| - | | ::: | GENETIC | 572,598 | 438,866 | 5,956 | 8,928 | | + | | ::: | GENETIC | 573,170 | 439,375 | 5,957 | 8,946 | |
| - | | ::: | COMBINED | 737,590 | 535,782 | 7,158 | 15,209 | | + | | ::: | COMBINED | 738,438 | 536,456 | 7,159 | 15,248 | |
| - | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 13,133 | 9,570 | 2,984 | 1,336 | | + | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 13,136 | 9,575 | 2,987 | 1,339 | |
| - | | ::: | GENETIC | 59,051 | 50,024 | 3,376 | 1,554 | | + | | ::: | GENETIC | 59,070 | 50,037 | 3,376 | 1,556 | |
| - | | ::: | COMBINED | 72,184 | 58,739 | 4,318 | 2,297 | | + | | ::: | COMBINED | 72,206 | 58,755 | 4,321 | 2,302 | |
| | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 17 | 16 | 17 | 3 | | | ::: | COMBINED | 17 | 16 | 17 | 3 | | ||
| - | | **//Sus scrofa//** | PHYSICAL | 83 | 79 | 94 | 28 | | + | | **//Sus scrofa//** | PHYSICAL | 84 | 80 | 96 | 29 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 83 | 79 | 94 | 28 | | + | | ::: | COMBINED | 84 | 80 | 96 | 29 | |
| | **//Tobacco Mosaic Virus//** | PHYSICAL | 3 | 2 | 3 | 1 | | | **//Tobacco Mosaic Virus//** | PHYSICAL | 3 | 2 | 3 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Xenopus laevis//** | PHYSICAL | 1,371 | 1,216 | 1,118 | 221 | | + | | **//Xenopus laevis//** | PHYSICAL | 1,381 | 1,226 | 1,125 | 224 | |
| | ::: | GENETIC | 7 | 7 | 10 | 3 | | | ::: | GENETIC | 7 | 7 | 10 | 3 | | ||
| - | | ::: | COMBINED | 1,378 | 1,223 | 1,128 | 224 | | + | | ::: | COMBINED | 1,388 | 1,233 | 1,135 | 227 | |
| | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | | **//Zea mays//** | PHYSICAL | 18 | 13 | 21 | 9 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 13 | 21 | 9 | | | ::: | COMBINED | 18 | 13 | 21 | 9 | | ||
| - | | **//All Organisms//** | PHYSICAL | 782,460 | 583,992 | 64,269 | 45,390 | | + | | **//All Organisms//** | PHYSICAL | 824,395 | 618,467 | 65,600 | 46,913 | |
| - | | ::: | GENETIC | 824,577 | 675,904 | 20,094 | 15,260 | | + | | ::: | GENETIC | 826,212 | 677,160 | 20,289 | 15,522 | |
| - | | ::: | COMBINED | 1,607,037 | 1,243,659 | 69,247 | 56,052 | | + | | ::: | COMBINED | 1,650,607 | 1,279,126 | 70,567 | 57,653 | |
| ===== Chemical Interaction Statistics ===== | ===== Chemical Interaction Statistics ===== | ||
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| ====== Previous Build Statistics ====== | ====== Previous Build Statistics ====== | ||
| ==== 2018 Updates ==== | ==== 2018 Updates ==== | ||
| + | * **[[Build 3.5.167]]** | ||
| + | * **[[Build 3.5.166]]** | ||
| * **[[Build 3.5.165]]** | * **[[Build 3.5.165]]** | ||
| * **[[Build 3.4.164]]** | * **[[Build 3.4.164]]** | ||