BioGRID Partners
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partners [2019/04/24 18:44] biogridadmin [Model Organism Database Partners] |
partners [2023/10/16 15:30] biogridadmin [Facility Partners] |
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===== Facility Partners ===== | ===== Facility Partners ===== | ||
- | [[http://www.iric.ca/|{{:universityofmontreal.jpg|Universite de Montreal}}]][[http://www.princeton.edu|{{:princeton.jpg|Princeton University}}]][[http://www.lunenfeld.ca/|{{:msh.jpg|Samuel Lunenfeld Research Institute}}]][[http://www.ed.ac.uk/home|{{:edinburgh.jpg|University of Edinburgh}}]] | + | [[https://www.sickkids.ca/en/research/about-research-institute/|{{:sickkids.png|SickKids The Hospital for Sick Children}}]][[http://www.princeton.edu|{{:princeton.jpg|Princeton University}}]] |
===== Model Organism Database Partners ===== | ===== Model Organism Database Partners ===== | ||
[[http://www.yeastgenome.org/|{{:sgd.jpg|Saccharomyce Genome Database}}]][[http://flybase.org/|{{:flybase.jpg|FlyBase}}]][[http://www.genedb.org|{{:genedb.jpg|GeneDB}}]][[http://www.ncbi.nlm.nih.gov/gene/|{{:ncbi.jpg|Entrez Gene}}]][[https://www.alliancegenome.org/|{{:alliance.jpg|Alliance of Genome Resources}}]][[http://www.hprd.org|{{:hprd.jpg|Human Protein Reference Database}}]][[http://www.arabidopsis.org/|{{:tair.jpg|The Arabidopsis Information Resource}}]][[http://www.wormbase.org/|{{:wormbase.jpg|}}]][[http://zfin.org/|{{:zfin.jpg|}}]][[http://www.informatics.jax.org/|{{:mgi.jpg|}}]][[http://www.mirbase.org/|{{:mirbase.jpg|}}]][[http://www.aphidbase.com/aphidbase/|{{:aphidbase.jpg|}}]][[http://www.beebase.org|{{:beebase.jpg|}}]][[http://dictybase.org/|{{:dictybase.jpg|}}]][[http://www.ecogene.org/|{{:ecogene.jpg|}}]][[http://www.genenames.org/|{{:hgnc.jpg|}}]][[http://www.maizegdb.org/|{{:maizegdb.jpg|}}]][[http://www.xenbase.org|{{:xenbase.jpg|}}]][[http://genomes.arc.georgetown.edu/drupal/bovine/|{{:bgd.jpg|}}]][[http://www.agnc.msstate.edu/|{{:cgnc.jpg|}}]][[http://www.vectorbase.org|{{:vectorbase.jpg|}}]][[http://www.pombase.org/|{{:pombase.jpg|}}]][[http://www.candidagenome.org/|{{:cgd.jpg|}}]][[http://bar.utoronto.ca/|{{:bar.jpg|}}]] | [[http://www.yeastgenome.org/|{{:sgd.jpg|Saccharomyce Genome Database}}]][[http://flybase.org/|{{:flybase.jpg|FlyBase}}]][[http://www.genedb.org|{{:genedb.jpg|GeneDB}}]][[http://www.ncbi.nlm.nih.gov/gene/|{{:ncbi.jpg|Entrez Gene}}]][[https://www.alliancegenome.org/|{{:alliance.jpg|Alliance of Genome Resources}}]][[http://www.hprd.org|{{:hprd.jpg|Human Protein Reference Database}}]][[http://www.arabidopsis.org/|{{:tair.jpg|The Arabidopsis Information Resource}}]][[http://www.wormbase.org/|{{:wormbase.jpg|}}]][[http://zfin.org/|{{:zfin.jpg|}}]][[http://www.informatics.jax.org/|{{:mgi.jpg|}}]][[http://www.mirbase.org/|{{:mirbase.jpg|}}]][[http://www.aphidbase.com/aphidbase/|{{:aphidbase.jpg|}}]][[http://www.beebase.org|{{:beebase.jpg|}}]][[http://dictybase.org/|{{:dictybase.jpg|}}]][[http://www.ecogene.org/|{{:ecogene.jpg|}}]][[http://www.genenames.org/|{{:hgnc.jpg|}}]][[http://www.maizegdb.org/|{{:maizegdb.jpg|}}]][[http://www.xenbase.org|{{:xenbase.jpg|}}]][[http://genomes.arc.georgetown.edu/drupal/bovine/|{{:bgd.jpg|}}]][[http://www.agnc.msstate.edu/|{{:cgnc.jpg|}}]][[http://www.vectorbase.org|{{:vectorbase.jpg|}}]][[http://www.pombase.org/|{{:pombase.jpg|}}]][[http://www.candidagenome.org/|{{:cgd.jpg|}}]][[http://bar.utoronto.ca/|{{:bar.jpg|}}]] | ||
- | ===== Interaction Database Partners ===== | + | ===== Interaction and META Database Partners ===== |
[[http://mint.bio.uniroma2.it/mint/Welcome.do|{{:mint.jpg|Molecular Interaction Database}}]][[http://www.ebi.ac.uk/intact/main.xhtml|{{:intact.jpg|Intact Interaction Database}}]][[http://dip.doe-mbi.ucla.edu/dip/Main.cgi|{{:dip.jpg|Database of Interacting Proteins}}]][[http://www.pathwaycommons.org/|{{:pathwaycommons.jpg|Pathway Commons}}]][[http://www.imexconsortium.org/|{{:imex.jpg|International Molecular Exchange Consortium}}]][[http://irefindex.uio.no/wiki/iRefIndex|{{:irefindex.jpg|iRefIndex}}]][[http://string.embl.de/|{{:string.jpg|STRING}}]][[http://matrixdb.ibcp.fr/|{{:matrixdb.jpg|}}]][[http://jcvi.org/mpidb/about.php|{{:mpidb.jpg|}}]][[http://mips.helmholtz-muenchen.de/genre/proj/mpact|{{:mpact.jpg|}}]][[http://wodaklab.org/iRefWeb/search/index|{{:irefweb.jpg|}}]][[http://www.lamhdi.org/|{{:lamhdi.jpg|}}]][[http://www.droidb.org/|{{:droidi.jpg|}}]][[http://drygin.ccbr.utoronto.ca/|{{:drygin.jpg|}}]][[http://dcv.uhnres.utoronto.ca/FPCLASS/|{{:fpclass.jpg|}}]][[http://www.innatedb.com/|{{:innatedb.jpg|}}]][[http://ophid.utoronto.ca/ophidv2.204/|{{:i2d.jpg|}}]][[http://www.molecularconnections.com/newHomePage/html/|{{:molecularconnections.jpg|}}]][[http://www.isb-sib.ch/|{{:sib.jpg|}}]][[http://www.ucl.ac.uk/functional-gene-annotation/cardiovascular|{{:uclbhf.jpg|}}]][[http://www.mechanobio.info/|{{:mbinfo.jpg|}}]] | [[http://mint.bio.uniroma2.it/mint/Welcome.do|{{:mint.jpg|Molecular Interaction Database}}]][[http://www.ebi.ac.uk/intact/main.xhtml|{{:intact.jpg|Intact Interaction Database}}]][[http://dip.doe-mbi.ucla.edu/dip/Main.cgi|{{:dip.jpg|Database of Interacting Proteins}}]][[http://www.pathwaycommons.org/|{{:pathwaycommons.jpg|Pathway Commons}}]][[http://www.imexconsortium.org/|{{:imex.jpg|International Molecular Exchange Consortium}}]][[http://irefindex.uio.no/wiki/iRefIndex|{{:irefindex.jpg|iRefIndex}}]][[http://string.embl.de/|{{:string.jpg|STRING}}]][[http://matrixdb.ibcp.fr/|{{:matrixdb.jpg|}}]][[http://jcvi.org/mpidb/about.php|{{:mpidb.jpg|}}]][[http://mips.helmholtz-muenchen.de/genre/proj/mpact|{{:mpact.jpg|}}]][[http://wodaklab.org/iRefWeb/search/index|{{:irefweb.jpg|}}]][[http://www.lamhdi.org/|{{:lamhdi.jpg|}}]][[http://www.droidb.org/|{{:droidi.jpg|}}]][[http://drygin.ccbr.utoronto.ca/|{{:drygin.jpg|}}]][[http://dcv.uhnres.utoronto.ca/FPCLASS/|{{:fpclass.jpg|}}]][[http://www.innatedb.com/|{{:innatedb.jpg|}}]][[http://ophid.utoronto.ca/ophidv2.204/|{{:i2d.jpg|}}]][[http://www.molecularconnections.com/newHomePage/html/|{{:molecularconnections.jpg|}}]][[http://www.isb-sib.ch/|{{:sib.jpg|}}]][[http://www.ucl.ac.uk/functional-gene-annotation/cardiovascular|{{:uclbhf.jpg|}}]][[http://www.mechanobio.info/|{{:mbinfo.jpg|}}]] | ||
===== Annotation Database Partners ===== | ===== Annotation Database Partners ===== | ||
- | [[http://www.geneontology.org/|{{:geneontology.jpg|Gene Ontology}}]][[http://www.ncbi.nlm.nih.gov/|{{:ncbi.jpg|}}]][[http://www.uniprot.org/|{{:uniprotkb.jpg|}}]][[http://www.reactome.org/|{{:reactome.jpg|Reactome}}]][[http://www.psidev.info/|{{:psi.jpg|Proteomics Standards Initiative}}]][[http://intermine.org/|{{:intermine.jpg|Intermine}}]][[http://uberon.github.io/|{{:uberon.jpg|Uberon}}]][[http://www.drugbank.ca/|{{:drugbank.jpg|DrugBank}}]][[http://flyatlas.org/atlas.cgi|{{:fly-atlas.jpg}}]][[http://www.signaling-gateway.org/molecule/|{{:signaling-gateway.jpg}}]] | + | [[http://www.geneontology.org/|{{:geneontology.jpg|Gene Ontology}}]][[http://www.ncbi.nlm.nih.gov/|{{:ncbi.jpg|}}]][[http://www.uniprot.org/|{{:uniprotkb.jpg|}}]][[http://www.reactome.org/|{{:reactome.jpg|Reactome}}]][[http://www.psidev.info/|{{:psi.jpg|Proteomics Standards Initiative}}]][[http://intermine.org/|{{:intermine.jpg|Intermine}}]][[http://uberon.github.io/|{{:uberon.jpg|Uberon}}]][[http://flyatlas.org/atlas.cgi|{{:fly-atlas.jpg}}]][[http://www.signaling-gateway.org/molecule/|{{:signaling-gateway.jpg}}]] |
+ | |||
+ | ===== Chemical Database Partners ===== | ||
+ | [[https://www.bindingdb.org|{{:bindingdb.jpg|BindingDB}}]][[http://www.rcsb.org/|{{:pdb.jpg|Protein Data Bank}}]][[https://pubchem.ncbi.nlm.nih.gov/|{{:pubchem.jpg|PubChem}}]][[http://www.drugbank.ca/|{{:drugbank.jpg|DrugBank}}]][[https://www.ebi.ac.uk/chembl/|{{:chembl.jpg|ChEMBL}}]][[https://www.ebi.ac.uk/chebi/downloadsForward.do|{{:chebi.jpg|ChEBI}}]][[http://www.chemspider.com/|{{:chemspider.jpg|ChemSpider}}]] | ||
===== Tool Partners ===== | ===== Tool Partners ===== | ||
[[https://osprey.thebiogrid.org/|{{:osprey.jpg|Osprey Network Visualization System}}]][[http://www.cytoscape.org/|{{:cytoscape.jpg|Cytoscape}}]][[http://www.ndexbio.org/#/|{{:ndex2.jpg|}}]][[http://www.genemania.org|{{:genemania.jpg|}}]][[http://www.esyn.org/|{{:esyn.jpg|}}]][[http://prohitsms.com/Prohits_download/list.php|{{:prohits.jpg|}}]][[http://mentha.uniroma2.it/|{{:mentha.jpg|}}]][[https://ferret.ai/|{{:ferretai.jpg|}}]][[http://gpsprot.org/index.php|{{:gps-prot.jpg|}}]] | [[https://osprey.thebiogrid.org/|{{:osprey.jpg|Osprey Network Visualization System}}]][[http://www.cytoscape.org/|{{:cytoscape.jpg|Cytoscape}}]][[http://www.ndexbio.org/#/|{{:ndex2.jpg|}}]][[http://www.genemania.org|{{:genemania.jpg|}}]][[http://www.esyn.org/|{{:esyn.jpg|}}]][[http://prohitsms.com/Prohits_download/list.php|{{:prohits.jpg|}}]][[http://mentha.uniroma2.it/|{{:mentha.jpg|}}]][[https://ferret.ai/|{{:ferretai.jpg|}}]][[http://gpsprot.org/index.php|{{:gps-prot.jpg|}}]] |