Table of Contents

Build Statistics (3.4.163) - August 2018

This page shows the statistics for the BioGRID database as was established via the above referenced data and release version. If you are interested in accessing the data from this exact build, please visit our download page and find the correct version under “Release Archive”. It is highly recommended that all new projects use the latest BioGRID release when possible.

Physical and Genetic Interaction Statistics

Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications
Anopheles gambiae (PEST) PHYSICAL 2 1 2 2
GENETIC 0 0 0 0
COMBINED 2 1 2 2
Apis mellifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Arabidopsis thaliana (Columbia) PHYSICAL 42,635 35,896 9,571 2,283
GENETIC 350 282 304 154
COMBINED 42,985 36,091 9,626 2,363
Bacillus subtilis (168) PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Bos taurus PHYSICAL 450 410 437 184
GENETIC 0 0 0 0
COMBINED 450 410 437 184
Caenorhabditis elegans PHYSICAL 6,350 5,805 3,281 193
GENETIC 2,336 2,269 1,130 34
COMBINED 8,686 8,051 3,954 211
Candida albicans (SC5314) PHYSICAL 435 273 258 91
GENETIC 296 285 294 23
COMBINED 731 548 502 102
Canis familiaris PHYSICAL 45 34 51 23
GENETIC 0 0 0 0
COMBINED 45 34 51 23
Cavia porcellus PHYSICAL 7 5 9 5
GENETIC 0 0 0 0
COMBINED 7 5 9 5
Chlamydomonas reinhardtii PHYSICAL 17 16 19 4
GENETIC 0 0 0 0
COMBINED 17 16 19 4
Chlorocebus sabaeus PHYSICAL 9 7 11 4
GENETIC 0 0 0 0
COMBINED 9 7 11 4
Cricetulus griseus PHYSICAL 24 24 32 8
GENETIC 0 0 0 0
COMBINED 24 24 32 8
Danio rerio PHYSICAL 220 194 189 37
GENETIC 70 64 65 30
COMBINED 290 255 247 66
Dictyostelium discoideum (AX4) PHYSICAL 24 17 20 7
GENETIC 6 6 8 2
COMBINED 30 20 24 8
Drosophila melanogaster PHYSICAL 54,585 47,068 8,855 2,791
GENETIC 13,440 9,412 2,958 4,156
COMBINED 68,025 55,347 9,197 6,203
Emericella nidulans (FGSC A4) PHYSICAL 65 57 57 3
GENETIC 6 5 7 3
COMBINED 71 62 64 6
Equus caballus PHYSICAL 2 2 4 2
GENETIC 0 0 0 0
COMBINED 2 2 4 2
Escherichia coli (K12) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Escherichia coli (K12/MC4100/BW2952) PHYSICAL 9 9 10 2
GENETIC 0 0 0 0
COMBINED 9 9 10 2
Escherichia coli (K12/MG1655) PHYSICAL 113 109 116 23
GENETIC 26 25 36 12
COMBINED 139 133 150 35
Escherichia coli (K12/W3110) PHYSICAL 12,804 12,801 2,045 3
GENETIC 171,219 169,594 3,973 4
COMBINED 184,023 181,621 4,063 7
Gallus gallus PHYSICAL 483 412 382 83
GENETIC 13 10 15 10
COMBINED 496 421 391 92
Glycine max PHYSICAL 46 40 45 8
GENETIC 0 0 0 0
COMBINED 46 40 45 8
Hepatitus C Virus PHYSICAL 188 129 131 31
GENETIC 0 0 0 0
COMBINED 188 129 131 31
Homo sapiens PHYSICAL 449,169 332,829 22,792 27,514
GENETIC 2,221 2,165 1,794 320
COMBINED 451,390 334,684 23,098 27,636
Human Herpesvirus 1 PHYSICAL 247 189 168 44
GENETIC 6 6 7 1
COMBINED 253 194 173 44
Human Herpesvirus 2 PHYSICAL 4 3 5 3
GENETIC 0 0 0 0
COMBINED 4 3 5 3
Human Herpesvirus 3 PHYSICAL 4 2 4 2
GENETIC 0 0 0 0
COMBINED 4 2 4 2
Human Herpesvirus 4 PHYSICAL 318 234 240 39
GENETIC 0 0 0 0
COMBINED 318 234 240 39
Human Herpesvirus 5 PHYSICAL 115 80 91 22
GENETIC 0 0 0 0
COMBINED 115 80 91 22
Human Herpesvirus 6A PHYSICAL 9 6 9 5
GENETIC 0 0 0 0
COMBINED 9 6 9 5
Human Herpesvirus 6B PHYSICAL 4 4 7 3
GENETIC 0 0 0 0
COMBINED 4 4 7 3
Human Herpesvirus 8 PHYSICAL 768 688 714 38
GENETIC 0 0 0 0
COMBINED 768 688 714 38
Human Immunodeficiency Virus 1 PHYSICAL 1,969 1,304 1,119 336
GENETIC 1 1 2 1
COMBINED 1,970 1,304 1,119 337
Human Immunodeficiency Virus 2 PHYSICAL 20 12 16 11
GENETIC 0 0 0 0
COMBINED 20 12 16 11
Human papillomavirus (16) PHYSICAL 27 12 14 9
GENETIC 0 0 0 0
COMBINED 27 12 14 9
Macaca mulatta PHYSICAL 22 13 15 13
GENETIC 0 0 0 0
COMBINED 22 13 15 13
Meleagris gallopavo PHYSICAL 2 2 2 1
GENETIC 0 0 0 0
COMBINED 2 2 2 1
Mus musculus PHYSICAL 44,539 38,587 12,952 3,733
GENETIC 377 332 336 192
COMBINED 44,916 38,846 13,013 3,868
Mycobacterium tuberculosis (H37Rv) PHYSICAL 11 9 11 2
GENETIC 0 0 0 0
COMBINED 11 9 11 2
Neurospora crassa (OR74A) PHYSICAL 11 10 12 2
GENETIC 0 0 0 0
COMBINED 11 10 12 2
Nicotiana tomentosiformis PHYSICAL 3 2 2 1
GENETIC 0 0 0 0
COMBINED 3 2 2 1
Oryctolagus cuniculus PHYSICAL 311 278 283 61
GENETIC 0 0 0 0
COMBINED 311 278 283 61
Oryza sativa (Japonica) PHYSICAL 108 92 75 19
GENETIC 2 2 3 1
COMBINED 110 94 75 19
Ovis aries PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Pan troglodytes PHYSICAL 5 4 8 4
GENETIC 0 0 0 0
COMBINED 5 4 8 4
Pediculus humanus PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Plasmodium falciparum (3D7) PHYSICAL 2,545 2,508 1,227 5
GENETIC 0 0 0 0
COMBINED 2,545 2,508 1,227 5
Rattus norvegicus PHYSICAL 6,277 5,250 3,692 1,083
GENETIC 19 19 31 12
COMBINED 6,296 5,260 3,702 1,086
Ricinus communis PHYSICAL 5 2 3 2
GENETIC 0 0 0 0
COMBINED 5 2 3 2
Saccharomyces cerevisiae (S288c) PHYSICAL 161,974 108,088 6,894 9,066
GENETIC 571,687 438,301 5,956 8,843
COMBINED 733,661 533,705 7,155 15,071
Schizosaccharomyces pombe (972h) PHYSICAL 13,121 9,554 2,984 1,330
GENETIC 59,032 50,003 3,377 1,548
COMBINED 72,153 58,705 4,318 2,288
Selaginella moellendorffii PHYSICAL 8 6 5 1
GENETIC 2 2 3 1
COMBINED 10 8 6 1
Simian Immunodeficiency Virus PHYSICAL 34 16 19 16
GENETIC 0 0 0 0
COMBINED 34 16 19 16
Simian Virus 40 PHYSICAL 9 5 6 5
GENETIC 0 0 0 0
COMBINED 9 5 6 5
Solanum lycopersicum PHYSICAL 137 107 44 8
GENETIC 4 4 4 1
COMBINED 141 109 45 8
Solanum tuberosum PHYSICAL 3 3 5 3
GENETIC 0 0 0 0
COMBINED 3 3 5 3
Strongylocentrotus purpuratus PHYSICAL 17 16 17 3
GENETIC 0 0 0 0
COMBINED 17 16 17 3
Sus scrofa PHYSICAL 83 79 94 28
GENETIC 0 0 0 0
COMBINED 83 79 94 28
Tobacco Mosaic Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Ustilago maydis (521) PHYSICAL 3 3 3 3
GENETIC 1 1 2 1
COMBINED 4 4 4 4
Vaccinia Virus PHYSICAL 7 6 8 3
GENETIC 0 0 0 0
COMBINED 7 6 8 3
Vitis vinifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Xenopus laevis PHYSICAL 1,371 1,216 1,118 221
GENETIC 7 7 10 3
COMBINED 1,378 1,223 1,128 224
Zea mays PHYSICAL 18 13 21 9
GENETIC 0 0 0 0
COMBINED 18 13 21 9
All Organisms PHYSICAL 770,825 576,448 63,987 44,981
GENETIC 820,577 672,271 19,697 15,164
COMBINED 1,591,402 1,232,786 68,981 55,581

Chemical Interaction Statistics

Organism Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications Unique Chemicals
Bacillus subtilis (168) 164 85 49 15 79
Caenorhabditis elegans 8 4 4 2 1
Candida albicans (SC5314) 108 25 7 50 24
Escherichia coli (K12) 5 2 2 3 2
Escherichia coli (K12/MG1655) 1,590 834 287 137 583
Homo sapiens 25,533 10,659 2,138 8,824 4,455
Human Herpesvirus 1 65 24 3 24 21
Human Herpesvirus 4 10 3 3 6 3
Human Immunodeficiency Virus 1 105 53 2 48 53
Leishmania major (Friedlin) 8 4 1 2 4
Mus musculus 2 1 1 2 1
Mycobacterium tuberculosis (CDC1551) 3 3 3 1 3
Mycobacterium tuberculosis (H37Rv) 1 1 1 1 1
Mycoplasma pneumoniae (M129) 2 1 1 2 1
Plasmodium falciparum (3D7) 4 1 1 4 1
Rattus norvegicus 2 2 1 2 2
Saccharomyces cerevisiae (S288c) 7 7 2 2 7
Streptococcus pneumoniae (ATCCBAA255) 82 72 8 11 29
Streptococcus pneumoniae (ATCCBAA334) 61 26 10 18 19
Synechococcus elongatus (PCC6301) 4 2 1 2 2
Vaccinia Virus 21 11 2 3 11
All Organisms 27,785 11,820 2,527 9,099 5,035

Post Translational Modification (PTM) Statistics

Organism PTM Sites Un-assigned Sites Unique Proteins Unique Genes Unique Publications
Arabidopsis thaliana (Columbia) SUMOYLATION 0 2 0 2 1
UBIQUITINATION 0 8 0 8 8
COMBINED 0 10 0 10 9
Bos taurus SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 1 0 1 1
COMBINED 0 3 0 3 3
Caenorhabditis elegans SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Chlorocebus sabaeus UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Cricetulus griseus UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Danio rerio SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 4 0 4 3
COMBINED 0 5 0 5 4
Drosophila melanogaster NEDDYLATION 0 2 0 2 1
SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 7 0 7 4
COMBINED 0 11 0 9 6
Gallus gallus SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 1 0 1 1
COMBINED 0 2 0 1 1
Hepatitus C Virus UBIQUITINATION 0 1 0 1 2
COMBINED 0 1 0 1 2
Homo sapiens ATG12-ATG5 CONJUGATE 0 1 0 1 2
FAT10YLATION 0 659 0 659 5
ISGYLATION 0 28 0 28 7
NEDDYLATION 0 903 0 903 75
SUMOYLATION 0 2,317 0 2,317 330
UBIQUITINATION 0 10,000 0 10,000 3,114
COMBINED 0 13,908 0 10,260 3,404
Human Herpesvirus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 3 0 3 4
COMBINED 0 4 0 3 5
Human Herpesvirus 4 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 1 0 1 1
COMBINED 0 2 0 1 1
Human Herpesvirus 6A SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Human Herpesvirus 8 UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Human Immunodeficiency Virus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 6 0 6 18
COMBINED 0 7 0 6 18
Macaca mulatta UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Mus musculus ATG12-ATG5 CONJUGATE 0 1 0 1 1
ISGYLATION 0 42 0 42 2
NEDDYLATION 0 6 0 6 5
SUMOYLATION 0 41 0 41 39
UBIQUITINATION 0 556 0 556 443
UFMYLATION 0 10 0 10 1
COMBINED 0 656 0 623 483
Rattus norvegicus NEDDYLATION 0 1 0 1 1
SUMOYLATION 0 6 0 6 6
UBIQUITINATION 0 35 0 35 35
COMBINED 0 42 0 40 40
Saccharomyces cerevisiae (S288c) NEDDYLATION 0 4 0 4 9
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 818 0 818 67
UBIQUITINATION 0 3,562 0 3,562 213
COMBINED 19,981 4,384 3,165 4,443 800
Schizosaccharomyces pombe (972h) UBIQUITINATION 0 4 0 4 3
COMBINED 0 4 0 4 3
Xenopus laevis UBIQUITINATION 0 2 0 2 2
COMBINED 0 2 0 2 2
All Organisms ATG12-ATG5 CONJUGATE 0 2 0 2 3
FAT10YLATION 0 659 0 659 5
ISGYLATION 0 70 0 70 8
NEDDYLATION 0 916 0 916 84
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 3,195 0 3,195 433
UBIQUITINATION 0 14,195 0 14,195 3,736
UFMYLATION 0 10 0 10 1
COMBINED 19,981 19,047 3,165 15,417 4,638

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