Table of Contents

Build Statistics (3.4.160) - May 2018

This page shows the statistics for the BioGRID database as was established via the above referenced data and release version. If you are interested in accessing the data from this exact build, please visit our download page and find the correct version under “Release Archive”. It is highly recommended that all new projects use the latest BioGRID release when possible.

Physical and Genetic Interaction Statistics

Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications
Anopheles gambiae (PEST) PHYSICAL 2 1 2 2
GENETIC 0 0 0 0
COMBINED 2 1 2 2
Apis mellifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Arabidopsis thaliana (Columbia) PHYSICAL 42,632 35,893 9,570 2,282
GENETIC 350 282 304 154
COMBINED 42,982 36,088 9,625 2,362
Bacillus subtilis (168) PHYSICAL 2 2 3 2
GENETIC 0 0 0 0
COMBINED 2 2 3 2
Bos taurus PHYSICAL 436 397 428 180
GENETIC 0 0 0 0
COMBINED 436 397 428 180
Caenorhabditis elegans PHYSICAL 6,350 5,805 3,281 193
GENETIC 2,336 2,269 1,130 34
COMBINED 8,686 8,051 3,954 211
Candida albicans (SC5314) PHYSICAL 205 137 146 43
GENETIC 278 270 274 10
COMBINED 483 405 397 52
Canis familiaris PHYSICAL 45 34 51 23
GENETIC 0 0 0 0
COMBINED 45 34 51 23
Cavia porcellus PHYSICAL 7 5 9 5
GENETIC 0 0 0 0
COMBINED 7 5 9 5
Chlamydomonas reinhardtii PHYSICAL 17 16 19 4
GENETIC 0 0 0 0
COMBINED 17 16 19 4
Chlorocebus sabaeus PHYSICAL 5 3 5 2
GENETIC 0 0 0 0
COMBINED 5 3 5 2
Cricetulus griseus PHYSICAL 23 23 30 7
GENETIC 0 0 0 0
COMBINED 23 23 30 7
Danio rerio PHYSICAL 220 194 189 37
GENETIC 70 64 65 30
COMBINED 290 255 247 66
Dictyostelium discoideum (AX4) PHYSICAL 24 17 20 7
GENETIC 6 6 8 2
COMBINED 30 20 24 8
Drosophila melanogaster PHYSICAL 54,515 47,000 8,843 2,788
GENETIC 13,422 9,394 2,953 4,155
COMBINED 67,937 55,261 9,184 6,199
Emericella nidulans (FGSC A4) PHYSICAL 65 57 57 3
GENETIC 6 5 7 3
COMBINED 71 62 64 6
Equus caballus PHYSICAL 2 2 4 2
GENETIC 0 0 0 0
COMBINED 2 2 4 2
Escherichia coli (K12) PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Escherichia coli (K12/MC4100/BW2952) PHYSICAL 9 9 10 2
GENETIC 0 0 0 0
COMBINED 9 9 10 2
Escherichia coli (K12/MG1655) PHYSICAL 113 109 116 23
GENETIC 26 25 36 12
COMBINED 139 133 150 35
Escherichia coli (K12/W3110) PHYSICAL 12,804 12,801 2,045 3
GENETIC 171,219 169,594 3,973 4
COMBINED 184,023 181,621 4,063 7
Gallus gallus PHYSICAL 442 374 359 81
GENETIC 13 10 15 10
COMBINED 455 383 368 90
Glycine max PHYSICAL 46 40 45 8
GENETIC 0 0 0 0
COMBINED 46 40 45 8
Hepatitus C Virus PHYSICAL 188 129 131 31
GENETIC 0 0 0 0
COMBINED 188 129 131 31
Homo sapiens PHYSICAL 437,733 322,610 22,514 27,228
GENETIC 2,209 2,153 1,779 314
COMBINED 439,942 324,456 22,823 27,346
Human Herpesvirus 1 PHYSICAL 228 176 163 42
GENETIC 6 6 7 1
COMBINED 234 181 168 42
Human Herpesvirus 2 PHYSICAL 4 3 5 3
GENETIC 0 0 0 0
COMBINED 4 3 5 3
Human Herpesvirus 3 PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Human Herpesvirus 4 PHYSICAL 313 230 236 38
GENETIC 0 0 0 0
COMBINED 313 230 236 38
Human Herpesvirus 5 PHYSICAL 103 77 88 21
GENETIC 0 0 0 0
COMBINED 103 77 88 21
Human Herpesvirus 6A PHYSICAL 9 6 9 5
GENETIC 0 0 0 0
COMBINED 9 6 9 5
Human Herpesvirus 6B PHYSICAL 4 4 7 3
GENETIC 0 0 0 0
COMBINED 4 4 7 3
Human Herpesvirus 8 PHYSICAL 759 684 713 35
GENETIC 0 0 0 0
COMBINED 759 684 713 35
Human Immunodeficiency Virus 1 PHYSICAL 1,968 1,304 1,119 335
GENETIC 1 1 2 1
COMBINED 1,969 1,304 1,119 336
Human Immunodeficiency Virus 2 PHYSICAL 20 12 16 11
GENETIC 0 0 0 0
COMBINED 20 12 16 11
Human papillomavirus (16) PHYSICAL 26 11 13 8
GENETIC 0 0 0 0
COMBINED 26 11 13 8
Macaca mulatta PHYSICAL 22 13 15 13
GENETIC 0 0 0 0
COMBINED 22 13 15 13
Meleagris gallopavo PHYSICAL 2 2 2 1
GENETIC 0 0 0 0
COMBINED 2 2 2 1
Mus musculus PHYSICAL 44,032 38,130 12,879 3,697
GENETIC 369 324 329 189
COMBINED 44,401 38,381 12,938 3,829
Mycobacterium tuberculosis (H37Rv) PHYSICAL 11 9 11 2
GENETIC 0 0 0 0
COMBINED 11 9 11 2
Neurospora crassa (OR74A) PHYSICAL 11 10 12 2
GENETIC 0 0 0 0
COMBINED 11 10 12 2
Nicotiana tomentosiformis PHYSICAL 3 2 2 1
GENETIC 0 0 0 0
COMBINED 3 2 2 1
Oryctolagus cuniculus PHYSICAL 278 247 259 55
GENETIC 0 0 0 0
COMBINED 278 247 259 55
Oryza sativa (Japonica) PHYSICAL 108 92 75 19
GENETIC 2 2 3 1
COMBINED 110 94 75 19
Pan troglodytes PHYSICAL 5 4 8 4
GENETIC 0 0 0 0
COMBINED 5 4 8 4
Pediculus humanus PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Plasmodium falciparum (3D7) PHYSICAL 2,545 2,508 1,227 5
GENETIC 0 0 0 0
COMBINED 2,545 2,508 1,227 5
Rattus norvegicus PHYSICAL 5,998 5,019 3,583 1,068
GENETIC 19 19 31 12
COMBINED 6,017 5,029 3,593 1,071
Ricinus communis PHYSICAL 5 2 3 2
GENETIC 0 0 0 0
COMBINED 5 2 3 2
Saccharomyces cerevisiae (S288c) PHYSICAL 157,649 105,117 6,883 8,912
GENETIC 550,762 424,944 5,956 8,670
COMBINED 708,411 517,765 7,151 14,812
Schizosaccharomyces pombe (972h) PHYSICAL 13,118 9,552 2,983 1,328
GENETIC 59,032 50,003 3,377 1,548
COMBINED 72,150 58,703 4,317 2,286
Selaginella moellendorffii PHYSICAL 8 6 5 1
GENETIC 2 2 3 1
COMBINED 10 8 6 1
Simian Immunodeficiency Virus PHYSICAL 34 16 19 16
GENETIC 0 0 0 0
COMBINED 34 16 19 16
Simian Virus 40 PHYSICAL 9 5 6 5
GENETIC 0 0 0 0
COMBINED 9 5 6 5
Solanum lycopersicum PHYSICAL 137 107 44 8
GENETIC 4 4 4 1
COMBINED 141 109 45 8
Solanum tuberosum PHYSICAL 3 3 5 3
GENETIC 0 0 0 0
COMBINED 3 3 5 3
Strongylocentrotus purpuratus PHYSICAL 17 16 17 3
GENETIC 0 0 0 0
COMBINED 17 16 17 3
Sus scrofa PHYSICAL 83 79 94 28
GENETIC 0 0 0 0
COMBINED 83 79 94 28
Tobacco Mosaic Virus PHYSICAL 3 2 3 1
GENETIC 0 0 0 0
COMBINED 3 2 3 1
Ustilago maydis (521) PHYSICAL 3 3 3 3
GENETIC 1 1 2 1
COMBINED 4 4 4 4
Vaccinia Virus PHYSICAL 7 6 8 3
GENETIC 0 0 0 0
COMBINED 7 6 8 3
Vitis vinifera PHYSICAL 1 1 2 1
GENETIC 0 0 0 0
COMBINED 1 1 2 1
Xenopus laevis PHYSICAL 1,357 1,202 1,102 216
GENETIC 7 7 10 3
COMBINED 1,364 1,209 1,112 219
Zea mays PHYSICAL 18 13 21 9
GENETIC 0 0 0 0
COMBINED 18 13 21 9
All Organisms PHYSICAL 754,057 562,432 63,469 44,483
GENETIC 799,599 658,864 19,654 14,971
COMBINED 1,553,656 1,205,762 68,478 54,972

Chemical Interaction Statistics

Organism Raw Interactions Non-Redundant Interactions Unique Genes Unique Publications Unique Chemicals
Bacillus subtilis (168) 164 85 49 15 79
Caenorhabditis elegans 8 4 4 2 1
Candida albicans (SC5314) 108 25 7 50 24
Escherichia coli (K12) 5 2 2 3 2
Escherichia coli (K12/MG1655) 1,590 834 287 137 583
Homo sapiens 25,533 10,659 2,138 8,824 4,455
Human Herpesvirus 1 65 24 3 24 21
Human Herpesvirus 4 10 3 3 6 3
Human Immunodeficiency Virus 1 105 53 2 48 53
Leishmania major (Friedlin) 8 4 1 2 4
Mus musculus 2 1 1 2 1
Mycobacterium tuberculosis (CDC1551) 3 3 3 1 3
Mycobacterium tuberculosis (H37Rv) 1 1 1 1 1
Mycoplasma pneumoniae (M129) 2 1 1 2 1
Plasmodium falciparum (3D7) 4 1 1 4 1
Rattus norvegicus 2 2 1 2 2
Saccharomyces cerevisiae (S288c) 7 7 2 2 7
Streptococcus pneumoniae (ATCCBAA255) 82 72 8 11 29
Streptococcus pneumoniae (ATCCBAA334) 61 26 10 18 19
Synechococcus elongatus (PCC6301) 4 2 1 2 2
Vaccinia Virus 21 11 2 3 11
All Organisms 27,785 11,820 2,527 9,099 5,035

Post Translational Modification (PTM) Statistics

Organism PTM Sites Un-assigned Sites Unique Proteins Unique Genes Unique Publications
Arabidopsis thaliana (Columbia) SUMOYLATION 0 2 0 2 1
UBIQUITINATION 0 8 0 8 8
COMBINED 0 10 0 10 9
Bos taurus SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 1 0 1 1
COMBINED 0 3 0 3 3
Caenorhabditis elegans SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Chlorocebus sabaeus UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Cricetulus griseus UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Danio rerio SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 4 0 4 3
COMBINED 0 5 0 5 4
Drosophila melanogaster NEDDYLATION 0 2 0 2 1
SUMOYLATION 0 2 0 2 2
UBIQUITINATION 0 7 0 7 4
COMBINED 0 11 0 9 6
Gallus gallus SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 1 0 1 1
COMBINED 0 2 0 1 1
Hepatitus C Virus UBIQUITINATION 0 1 0 1 2
COMBINED 0 1 0 1 2
Homo sapiens ATG12-ATG5 CONJUGATE 0 1 0 1 2
FAT10YLATION 0 659 0 659 5
ISGYLATION 0 28 0 28 7
NEDDYLATION 0 903 0 903 75
SUMOYLATION 0 2,317 0 2,317 330
UBIQUITINATION 0 10,000 0 10,000 3,114
COMBINED 0 13,908 0 10,260 3,404
Human Herpesvirus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 3 0 3 4
COMBINED 0 4 0 3 5
Human Herpesvirus 4 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 1 0 1 1
COMBINED 0 2 0 1 1
Human Herpesvirus 6A SUMOYLATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Human Herpesvirus 8 UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Human Immunodeficiency Virus 1 SUMOYLATION 0 1 0 1 1
UBIQUITINATION 0 6 0 6 18
COMBINED 0 7 0 6 18
Macaca mulatta UBIQUITINATION 0 1 0 1 1
COMBINED 0 1 0 1 1
Mus musculus ATG12-ATG5 CONJUGATE 0 1 0 1 1
ISGYLATION 0 42 0 42 2
NEDDYLATION 0 6 0 6 5
SUMOYLATION 0 41 0 41 39
UBIQUITINATION 0 556 0 556 443
UFMYLATION 0 10 0 10 1
COMBINED 0 656 0 623 483
Rattus norvegicus NEDDYLATION 0 1 0 1 1
SUMOYLATION 0 6 0 6 6
UBIQUITINATION 0 35 0 35 35
COMBINED 0 42 0 40 40
Saccharomyces cerevisiae (S288c) NEDDYLATION 0 4 0 4 9
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 818 0 818 67
UBIQUITINATION 0 3,562 0 3,562 213
COMBINED 19,981 4,384 3,165 4,443 800
Schizosaccharomyces pombe (972h) UBIQUITINATION 0 4 0 4 3
COMBINED 0 4 0 4 3
Xenopus laevis UBIQUITINATION 0 2 0 2 2
COMBINED 0 2 0 2 2
All Organisms ATG12-ATG5 CONJUGATE 0 2 0 2 3
FAT10YLATION 0 659 0 659 5
ISGYLATION 0 70 0 70 8
NEDDYLATION 0 916 0 916 84
PHOSPHORYLATION 19,981 0 3,165 3,165 528
SUMOYLATION 0 3,195 0 3,195 433
UBIQUITINATION 0 14,195 0 14,195 3,736
UFMYLATION 0 10 0 10 1
COMBINED 19,981 19,047 3,165 15,417 4,638

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