BioGRID Plugin 2.0
Differences
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biogridplugin2 [2013/03/28 07:07] andreww [Changes in BiogridPlugin 2.1] |
biogridplugin2 [2017/08/08 12:52] (current) |
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Data can now be imported from the new **[[biogridrest|BioGRID REST service]]**, which is set as the current data source by default, but can be changed under ‘Select Data Source’. | Data can now be imported from the new **[[biogridrest|BioGRID REST service]]**, which is set as the current data source by default, but can be changed under ‘Select Data Source’. | ||
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***Due to an upgrade of our main REST service the URL for use use in the Cytoscape plugin must be changed to: | ***Due to an upgrade of our main REST service the URL for use use in the Cytoscape plugin must be changed to: | ||
http://sce-bio-c02577.bio.ed.ac.uk:8080/BiogridRestService/resources/interactions*** | http://sce-bio-c02577.bio.ed.ac.uk:8080/BiogridRestService/resources/interactions*** | ||
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The ‘Pie Colors’ options are no longer available. | The ‘Pie Colors’ options are no longer available. | ||
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+ | =====Changes in BiogridPlugin 2.2===== | ||
+ | 1 The new BioGRID REST Web Service can now be used with the BioGRID Plugin. Enter "http://webservice.thebiogrid.org/interactions" under "Import data from">"BioGRID REST Service">"URL". | ||
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+ | 2 Use of the BioGRID REST Web Service now requires an Access Key. You can obtain one by signing up at http://webservice.thebiogrid.org. Enter this in the "Access Key" text field in the plugin. | ||
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+ | 3 The BioGRID REST Web Service no longer contains interactions mapped from IMEx databases. This option has been removed from the BioGRID Plugin filters. | ||
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+ | 4 The BioGRID REST Web Service no longer allows searching on interaction ids. Biogrid Interaction Ids can still be used as a filter option in the BioGRID Plugin if you are using a Biogrid file as the data source. | ||
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