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biogrid_tab_version_3.0 [2020/04/13 00:18]
biogridadmin [Interaction File Column Definitions]
biogrid_tab_version_3.0 [2020/04/29 19:10] (current)
biogridadmin
Line 28: Line 28:
   - **First author surname** of the publication in which the interaction has been shown, optionally followed by additional indicators, e.g. Stephenson A (2005)   - **First author surname** of the publication in which the interaction has been shown, optionally followed by additional indicators, e.g. Stephenson A (2005)
   - **Publication Source** the publication source in which the interaction has been shown. Format is "​SOURCE:​ID"​ so for example: PUBMED:​12345678 ​   - **Publication Source** the publication source in which the interaction has been shown. Format is "​SOURCE:​ID"​ so for example: PUBMED:​12345678 ​
-  - **Organism ID Interactor A**. This is the NCBI Taxonomy ID for Interactor A. +  - **Organism ID Interactor A**. This is the NCBI Taxonomy ID for Interactor A. 
 +  - **Organism Name Interactor A**. This is the NCBI Taxonomy Name for Interactor A. 
   - **Organism ID Interactor B**. Same structure as 16.   - **Organism ID Interactor B**. Same structure as 16.
 +  - **Organism Name Interactor B**. Same structure as 17.
   - **Interaction Throughput**. This will be either High Throughput, Low Throughput or Both (separated by "​|"​). ​   - **Interaction Throughput**. This will be either High Throughput, Low Throughput or Both (separated by "​|"​). ​
   - **Quantitative Score**. This will be a positive for negative value recorded by the original publication depicting P-Values, Confidence Score, SGA Score, etc. Will be "​-"​ if no score is reported.   - **Quantitative Score**. This will be a positive for negative value recorded by the original publication depicting P-Values, Confidence Score, SGA Score, etc. Will be "​-"​ if no score is reported.
 
biogrid_tab_version_3.0.txt · Last modified: 2020/04/29 19:10 by biogridadmin