BioGRID Database Statistics
Differences
This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision | Next revision Both sides next revision | ||
|
statistics [2019/03/31 23:25] biogridadmin |
statistics [2019/05/01 01:22] biogridadmin |
||
|---|---|---|---|
| Line 4: | Line 4: | ||
| * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | ||
| * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | ||
| - | ====== Current Build Statistics (3.5.171) - April 2019 ====== | + | ====== Current Build Statistics (3.5.172) - May 2019 ====== |
| Line 15: | Line 15: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,607 | 48,570 | 10,416 | 2,297 | | + | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,613 | 48,572 | 10,417 | 2,298 | |
| | ::: | GENETIC | 350 | 282 | 304 | 154 | | | ::: | GENETIC | 350 | 282 | 304 | 154 | | ||
| - | | ::: | COMBINED | 55,957 | 48,765 | 10,466 | 2,377 | | + | | ::: | COMBINED | 55,963 | 48,767 | 10,467 | 2,378 | |
| | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 3 | 2 | | | ::: | COMBINED | 2 | 2 | 3 | 2 | | ||
| - | | **//Bos taurus//** | PHYSICAL | 471 | 423 | 451 | 190 | | + | | **//Bos taurus//** | PHYSICAL | 479 | 431 | 455 | 191 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 471 | 423 | 451 | 190 | | + | | ::: | COMBINED | 479 | 431 | 455 | 191 | |
| - | | **//Caenorhabditis elegans//** | PHYSICAL | 6,360 | 5,808 | 3,281 | 196 | | + | | **//Caenorhabditis elegans//** | PHYSICAL | 6,362 | 5,809 | 3,281 | 197 | |
| | ::: | GENETIC | 2,336 | 2,269 | 1,130 | 34 | | | ::: | GENETIC | 2,336 | 2,269 | 1,130 | 34 | | ||
| - | | ::: | COMBINED | 8,696 | 8,054 | 3,954 | 214 | | + | | ::: | COMBINED | 8,698 | 8,055 | 3,954 | 215 | |
| - | | **//Candida albicans (SC5314)//** | PHYSICAL | 931 | 735 | 586 | 144 | | + | | **//Candida albicans (SC5314)//** | PHYSICAL | 1,060 | 861 | 695 | 148 | |
| - | | ::: | GENETIC | 306 | 293 | 303 | 28 | | + | | ::: | GENETIC | 477 | 403 | 325 | 30 | |
| - | | ::: | COMBINED | 1,237 | 1,015 | 811 | 156 | | + | | ::: | COMBINED | 1,537 | 1,250 | 935 | 161 | |
| - | | **//Canis familiaris//** | PHYSICAL | 137 | 125 | 142 | 25 | | + | | **//Canis familiaris//** | PHYSICAL | 138 | 126 | 144 | 26 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 137 | 125 | 142 | 25 | | + | | ::: | COMBINED | 138 | 126 | 144 | 26 | |
| | **//Cavia porcellus//** | PHYSICAL | 7 | 5 | 9 | 5 | | | **//Cavia porcellus//** | PHYSICAL | 7 | 5 | 9 | 5 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 42: | Line 42: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 11 | 9 | 14 | 5 | | | ::: | COMBINED | 11 | 9 | 14 | 5 | | ||
| - | | **//Cricetulus griseus//** | PHYSICAL | 54 | 54 | 63 | 9 | | + | | **//Cricetulus griseus//** | PHYSICAL | 55 | 55 | 65 | 10 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 54 | 54 | 63 | 9 | | + | | ::: | COMBINED | 55 | 55 | 65 | 10 | |
| - | | **//Danio rerio//** | PHYSICAL | 223 | 196 | 192 | 39 | | + | | **//Danio rerio//** | PHYSICAL | 224 | 197 | 192 | 40 | |
| | ::: | GENETIC | 70 | 64 | 65 | 30 | | | ::: | GENETIC | 70 | 64 | 65 | 30 | | ||
| - | | ::: | COMBINED | 293 | 257 | 250 | 68 | | + | | ::: | COMBINED | 294 | 258 | 250 | 69 | |
| | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 24 | 17 | 20 | 7 | | | **//Dictyostelium discoideum (AX4)//** | PHYSICAL | 24 | 17 | 20 | 7 | | ||
| | ::: | GENETIC | 6 | 6 | 8 | 2 | | | ::: | GENETIC | 6 | 6 | 8 | 2 | | ||
| Line 72: | Line 72: | ||
| | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | ||
| | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | ||
| - | | **//Gallus gallus//** | PHYSICAL | 499 | 424 | 398 | 91 | | + | | **//Gallus gallus//** | PHYSICAL | 500 | 425 | 400 | 92 | |
| | ::: | GENETIC | 13 | 10 | 15 | 10 | | | ::: | GENETIC | 13 | 10 | 15 | 10 | | ||
| - | | ::: | COMBINED | 512 | 433 | 406 | 100 | | + | | ::: | COMBINED | 513 | 434 | 408 | 101 | |
| | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 81: | Line 81: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 197 | 133 | 135 | 34 | | | ::: | COMBINED | 197 | 133 | 135 | 34 | | ||
| - | | **//Homo sapiens//** | PHYSICAL | 494,271 | 367,036 | 23,200 | 29,169 | | + | | **//Homo sapiens//** | PHYSICAL | 497,080 | 369,023 | 23,222 | 29,346 | |
| | ::: | GENETIC | 7,508 | 7,420 | 2,435 | 330 | | | ::: | GENETIC | 7,508 | 7,420 | 2,435 | 330 | | ||
| - | | ::: | COMBINED | 501,779 | 373,866 | 23,505 | 29,299 | | + | | ::: | COMBINED | 504,588 | 375,840 | 23,527 | 29,476 | |
| | **//Human Herpesvirus 1//** | PHYSICAL | 265 | 204 | 173 | 48 | | | **//Human Herpesvirus 1//** | PHYSICAL | 265 | 204 | 173 | 48 | | ||
| | ::: | GENETIC | 6 | 6 | 7 | 1 | | | ::: | GENETIC | 6 | 6 | 7 | 1 | | ||
| Line 93: | Line 93: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 3 | 6 | 3 | | | ::: | COMBINED | 5 | 3 | 6 | 3 | | ||
| - | | **//Human Herpesvirus 4//** | PHYSICAL | 404 | 307 | 306 | 45 | | + | | **//Human Herpesvirus 4//** | PHYSICAL | 408 | 308 | 307 | 46 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 404 | 307 | 306 | 45 | | + | | ::: | COMBINED | 408 | 308 | 307 | 46 | |
| - | | **//Human Herpesvirus 5//** | PHYSICAL | 117 | 81 | 93 | 24 | | + | | **//Human Herpesvirus 5//** | PHYSICAL | 118 | 82 | 94 | 25 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 117 | 81 | 93 | 24 | | + | | ::: | COMBINED | 118 | 82 | 94 | 25 | |
| | **//Human Herpesvirus 6A//** | PHYSICAL | 11 | 8 | 12 | 7 | | | **//Human Herpesvirus 6A//** | PHYSICAL | 11 | 8 | 12 | 7 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 108: | Line 108: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Human Herpesvirus 8//** | PHYSICAL | 770 | 690 | 715 | 40 | | + | | **//Human Herpesvirus 8//** | PHYSICAL | 777 | 692 | 715 | 41 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 770 | 690 | 715 | 40 | | + | | ::: | COMBINED | 777 | 692 | 715 | 41 | |
| - | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 1,989 | 1,313 | 1,125 | 345 | | + | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 1,996 | 1,315 | 1,127 | 347 | |
| | ::: | GENETIC | 1 | 1 | 2 | 1 | | | ::: | GENETIC | 1 | 1 | 2 | 1 | | ||
| - | | ::: | COMBINED | 1,990 | 1,313 | 1,125 | 346 | | + | | ::: | COMBINED | 1,997 | 1,315 | 1,127 | 348 | |
| | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 20 | 12 | 16 | 11 | | | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 20 | 12 | 16 | 11 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 120: | Line 120: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Human papillomavirus (16)//** | PHYSICAL | 233 | 173 | 158 | 18 | | + | | **//Human papillomavirus (16)//** | PHYSICAL | 238 | 176 | 163 | 20 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 233 | 173 | 158 | 18 | | + | | ::: | COMBINED | 238 | 176 | 163 | 20 | |
| - | | **//Human papillomavirus (6b)//** | PHYSICAL | 19 | 19 | 21 | 1 | | + | | **//Human papillomavirus (6b)//** | PHYSICAL | 20 | 20 | 22 | 2 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 19 | 19 | 21 | 1 | | + | | ::: | COMBINED | 20 | 20 | 22 | 2 | |
| | **//Macaca mulatta//** | PHYSICAL | 22 | 13 | 15 | 13 | | | **//Macaca mulatta//** | PHYSICAL | 22 | 13 | 15 | 13 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 132: | Line 132: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 2 | 1 | | | ::: | COMBINED | 2 | 2 | 2 | 1 | | ||
| - | | **//Mus musculus//** | PHYSICAL | 46,365 | 40,144 | 13,210 | 3,902 | | + | | **//Mus musculus//** | PHYSICAL | 46,480 | 40,220 | 13,225 | 3,928 | |
| | ::: | GENETIC | 378 | 333 | 337 | 193 | | | ::: | GENETIC | 378 | 333 | 337 | 193 | | ||
| - | | ::: | COMBINED | 46,743 | 40,404 | 13,269 | 4,038 | | + | | ::: | COMBINED | 46,858 | 40,480 | 13,284 | 4,064 | |
| | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 12 | 10 | 13 | 3 | | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 12 | 10 | 13 | 3 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 147: | Line 147: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 313 | 280 | 285 | 62 | | | ::: | COMBINED | 313 | 280 | 285 | 62 | | ||
| - | | **//Oryza sativa (Japonica)//** | PHYSICAL | 108 | 92 | 75 | 19 | | + | | **//Oryza sativa (Japonica)//** | PHYSICAL | 343 | 327 | 310 | 20 | |
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
| - | | ::: | COMBINED | 110 | 94 | 75 | 19 | | + | | ::: | COMBINED | 345 | 329 | 310 | 20 | |
| | **//Ovis aries//** | PHYSICAL | 1 | 1 | 2 | 1 | | | **//Ovis aries//** | PHYSICAL | 1 | 1 | 2 | 1 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| Line 162: | Line 162: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | ||
| - | | **//Rattus norvegicus//** | PHYSICAL | 7,084 | 5,992 | 3,962 | 1,139 | | + | | **//Rattus norvegicus//** | PHYSICAL | 7,756 | 6,607 | 4,146 | 1,147 | |
| | ::: | GENETIC | 19 | 19 | 31 | 12 | | | ::: | GENETIC | 19 | 19 | 31 | 12 | | ||
| - | | ::: | COMBINED | 7,103 | 6,002 | 3,972 | 1,142 | | + | | ::: | COMBINED | 7,775 | 6,617 | 4,156 | 1,150 | |
| | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 2 | 3 | 2 | | | ::: | COMBINED | 5 | 2 | 3 | 2 | | ||
| - | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 168,432 | 112,195 | 6,902 | 9,284 | | + | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 169,956 | 113,279 | 6,906 | 9,365 | |
| - | | ::: | GENETIC | 573,603 | 439,566 | 5,957 | 9,031 | | + | | ::: | GENETIC | 574,160 | 439,878 | 5,957 | 9,100 | |
| - | | ::: | COMBINED | 742,035 | 538,624 | 7,161 | 15,400 | | + | | ::: | COMBINED | 744,116 | 539,920 | 7,163 | 15,521 | |
| - | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 14,237 | 10,373 | 3,158 | 1,456 | | + | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 14,699 | 10,638 | 3,206 | 1,510 | |
| - | | ::: | GENETIC | 60,107 | 50,665 | 3,429 | 1,787 | | + | | ::: | GENETIC | 60,530 | 51,003 | 3,473 | 1,857 | |
| - | | ::: | COMBINED | 74,344 | 60,089 | 4,407 | 2,564 | | + | | ::: | COMBINED | 75,229 | 60,664 | 4,435 | 2,663 | |
| | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
| Line 213: | Line 213: | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 13 | 21 | 9 | | | ::: | COMBINED | 18 | 13 | 21 | 9 | | ||
| - | | **//All Organisms//** | PHYSICAL | 846,885 | 636,059 | 66,254 | 47,984 | | + | | **//All Organisms//** | PHYSICAL | 852,624 | 640,241 | 66,751 | 48,307 | |
| - | | ::: | GENETIC | 829,895 | 680,187 | 20,585 | 15,842 | | + | | ::: | GENETIC | 831,046 | 680,947 | 20,651 | 15,982 | |
| - | | ::: | COMBINED | 1,676,780 | 1,299,261 | 71,129 | 58,912 | | + | | ::: | COMBINED | 1,683,670 | 1,304,061 | 71,619 | 59,319 | |
| ===== Chemical Interaction Statistics ===== | ===== Chemical Interaction Statistics ===== | ||
| Line 324: | Line 324: | ||
| ====== Previous Build Statistics ====== | ====== Previous Build Statistics ====== | ||
| ==== 2019 Updates ==== | ==== 2019 Updates ==== | ||
| + | * **[[Build 3.5.172]]** | ||
| * **[[Build 3.5.171]]** | * **[[Build 3.5.171]]** | ||
| * **[[Build 3.5.170]]** | * **[[Build 3.5.170]]** | ||