BioGRID Database Statistics
Differences
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statistics [2018/12/19 11:34] biogridadmin |
statistics [2019/02/01 00:27] biogridadmin |
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| * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | * **Raw Interactions** - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. | ||
| * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | * **Non-Redundant Interactions** - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experimental system and publication. | ||
| - | ====== Current Build Statistics (3.5.167) - December 2018 ====== | + | ====== Current Build Statistics (3.5.169) - February 2019 ====== |
| ===== Physical and Genetic Interaction Statistics ===== | ===== Physical and Genetic Interaction Statistics ===== | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,655 | 48,589 | 10,418 | 2,303 | | + | | **//Arabidopsis thaliana (Columbia)//** | PHYSICAL | 55,657 | 48,591 | 10,418 | 2,304 | |
| | ::: | GENETIC | 350 | 282 | 304 | 154 | | | ::: | GENETIC | 350 | 282 | 304 | 154 | | ||
| - | | ::: | COMBINED | 56,005 | 48,784 | 10,468 | 2,383 | | + | | ::: | COMBINED | 56,007 | 48,786 | 10,468 | 2,384 | |
| | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | | **//Bacillus subtilis (168)//** | PHYSICAL | 2 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 3 | 2 | | | ::: | COMBINED | 2 | 2 | 3 | 2 | | ||
| - | | **//Bos taurus//** | PHYSICAL | 456 | 415 | 443 | 187 | | + | | **//Bos taurus//** | PHYSICAL | 459 | 417 | 446 | 189 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 456 | 415 | 443 | 187 | | + | | ::: | COMBINED | 459 | 417 | 446 | 189 | |
| - | | **//Caenorhabditis elegans//** | PHYSICAL | 6,352 | 5,806 | 3,280 | 194 | | + | | **//Caenorhabditis elegans//** | PHYSICAL | 6,354 | 5,807 | 3,281 | 195 | |
| | ::: | GENETIC | 2,336 | 2,269 | 1,130 | 34 | | | ::: | GENETIC | 2,336 | 2,269 | 1,130 | 34 | | ||
| - | | ::: | COMBINED | 8,688 | 8,052 | 3,953 | 212 | | + | | ::: | COMBINED | 8,690 | 8,053 | 3,954 | 213 | |
| - | | **//Candida albicans (SC5314)//** | PHYSICAL | 819 | 627 | 506 | 136 | | + | | **//Candida albicans (SC5314)//** | PHYSICAL | 929 | 733 | 584 | 142 | |
| | ::: | GENETIC | 306 | 293 | 303 | 28 | | | ::: | GENETIC | 306 | 293 | 303 | 28 | | ||
| - | | ::: | COMBINED | 1,125 | 907 | 738 | 148 | | + | | ::: | COMBINED | 1,235 | 1,013 | 809 | 154 | |
| | **//Canis familiaris//** | PHYSICAL | 46 | 35 | 53 | 24 | | | **//Canis familiaris//** | PHYSICAL | 46 | 35 | 53 | 24 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | COMBINED | 30 | 20 | 24 | 8 | | | ::: | COMBINED | 30 | 20 | 24 | 8 | | ||
| | **//Drosophila melanogaster//** | PHYSICAL | 62,181 | 52,375 | 9,001 | 3,687 | | | **//Drosophila melanogaster//** | PHYSICAL | 62,181 | 52,375 | 9,001 | 3,687 | | ||
| - | | ::: | GENETIC | 14,476 | 10,139 | 3,145 | 4,394 | | + | | ::: | GENETIC | 14,477 | 10,140 | 3,146 | 4,395 | |
| - | | ::: | COMBINED | 76,657 | 61,162 | 9,338 | 7,156 | | + | | ::: | COMBINED | 76,658 | 61,163 | 9,338 | 7,157 | |
| | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | | **//Emericella nidulans (FGSC A4)//** | PHYSICAL | 65 | 57 | 57 | 3 | | ||
| | ::: | GENETIC | 6 | 5 | 7 | 3 | | | ::: | GENETIC | 6 | 5 | 7 | 3 | | ||
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| | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | | ::: | GENETIC | 171,219 | 169,594 | 3,973 | 4 | | ||
| | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | | ::: | COMBINED | 184,023 | 181,621 | 4,063 | 7 | | ||
| - | | **//Gallus gallus//** | PHYSICAL | 488 | 416 | 388 | 86 | | + | | **//Gallus gallus//** | PHYSICAL | 496 | 422 | 396 | 89 | |
| | ::: | GENETIC | 13 | 10 | 15 | 10 | | | ::: | GENETIC | 13 | 10 | 15 | 10 | | ||
| - | | ::: | COMBINED | 501 | 425 | 396 | 95 | | + | | ::: | COMBINED | 509 | 431 | 404 | 98 | |
| | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | | **//Glycine max//** | PHYSICAL | 46 | 40 | 45 | 8 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 46 | 40 | 45 | 8 | | | ::: | COMBINED | 46 | 40 | 45 | 8 | | ||
| - | | **//Hepatitus C Virus//** | PHYSICAL | 191 | 130 | 132 | 32 | | + | | **//Hepatitus C Virus//** | PHYSICAL | 192 | 131 | 133 | 33 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 191 | 130 | 132 | 32 | | + | | ::: | COMBINED | 192 | 131 | 133 | 33 | |
| - | | **//Homo sapiens//** | PHYSICAL | 477,251 | 353,521 | 22,947 | 28,364 | | + | | **//Homo sapiens//** | PHYSICAL | 486,009 | 360,538 | 23,070 | 28,755 | |
| - | | ::: | GENETIC | 5,289 | 5,211 | 2,190 | 324 | | + | | ::: | GENETIC | 5,299 | 5,218 | 2,196 | 327 | |
| - | | ::: | COMBINED | 482,540 | 358,269 | 23,252 | 28,489 | | + | | ::: | COMBINED | 491,308 | 365,293 | 23,373 | 28,883 | |
| | **//Human Herpesvirus 1//** | PHYSICAL | 253 | 192 | 171 | 47 | | | **//Human Herpesvirus 1//** | PHYSICAL | 253 | 192 | 171 | 47 | | ||
| | ::: | GENETIC | 6 | 6 | 7 | 1 | | | ::: | GENETIC | 6 | 6 | 7 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 4 | 2 | 4 | 2 | | | ::: | COMBINED | 4 | 2 | 4 | 2 | | ||
| - | | **//Human Herpesvirus 4//** | PHYSICAL | 323 | 236 | 241 | 41 | | + | | **//Human Herpesvirus 4//** | PHYSICAL | 402 | 305 | 304 | 44 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 323 | 236 | 241 | 41 | | + | | ::: | COMBINED | 402 | 305 | 304 | 44 | |
| - | | **//Human Herpesvirus 5//** | PHYSICAL | 115 | 80 | 91 | 22 | | + | | **//Human Herpesvirus 5//** | PHYSICAL | 116 | 81 | 93 | 23 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 115 | 80 | 91 | 22 | | + | | ::: | COMBINED | 116 | 81 | 93 | 23 | |
| | **//Human Herpesvirus 6A//** | PHYSICAL | 10 | 7 | 11 | 6 | | | **//Human Herpesvirus 6A//** | PHYSICAL | 10 | 7 | 11 | 6 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 1 | 1 | 2 | 1 | | | ::: | COMBINED | 1 | 1 | 2 | 1 | | ||
| - | | **//Human Herpesvirus 8//** | PHYSICAL | 769 | 689 | 714 | 39 | | + | | **//Human Herpesvirus 8//** | PHYSICAL | 770 | 690 | 715 | 40 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 769 | 689 | 714 | 39 | | + | | ::: | COMBINED | 770 | 690 | 715 | 40 | |
| - | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 1,979 | 1,309 | 1,123 | 342 | | + | | **//Human Immunodeficiency Virus 1//** | PHYSICAL | 1,988 | 1,312 | 1,124 | 344 | |
| | ::: | GENETIC | 1 | 1 | 2 | 1 | | | ::: | GENETIC | 1 | 1 | 2 | 1 | | ||
| - | | ::: | COMBINED | 1,980 | 1,309 | 1,123 | 343 | | + | | ::: | COMBINED | 1,989 | 1,312 | 1,124 | 345 | |
| | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 20 | 12 | 16 | 11 | | | **//Human Immunodeficiency Virus 2//** | PHYSICAL | 20 | 12 | 16 | 11 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2 | 2 | 2 | 1 | | | ::: | COMBINED | 2 | 2 | 2 | 1 | | ||
| - | | **//Mus musculus//** | PHYSICAL | 45,302 | 39,258 | 13,109 | 3,817 | | + | | **//Mus musculus//** | PHYSICAL | 45,589 | 39,426 | 13,140 | 3,857 | |
| - | | ::: | GENETIC | 377 | 332 | 336 | 192 | | + | | ::: | GENETIC | 378 | 333 | 337 | 193 | |
| - | | ::: | COMBINED | 45,679 | 39,517 | 13,168 | 3,952 | | + | | ::: | COMBINED | 45,967 | 39,686 | 13,199 | 3,993 | |
| | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 11 | 9 | 11 | 2 | | | **//Mycobacterium tuberculosis (H37Rv)//** | PHYSICAL | 11 | 9 | 11 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 6 | 5 | 10 | 5 | | | ::: | COMBINED | 6 | 5 | 10 | 5 | | ||
| - | | **//Pediculus humanus//** | PHYSICAL | 1 | 1 | 2 | 1 | | + | | **//Pediculus humanus//** | PHYSICAL | 2 | 2 | 3 | 2 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 1 | 1 | 2 | 1 | | + | | ::: | COMBINED | 2 | 2 | 3 | 2 | |
| | **//Plasmodium falciparum (3D7)//** | PHYSICAL | 2,545 | 2,508 | 1,227 | 5 | | | **//Plasmodium falciparum (3D7)//** | PHYSICAL | 2,545 | 2,508 | 1,227 | 5 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | | ::: | COMBINED | 2,545 | 2,508 | 1,227 | 5 | | ||
| - | | **//Rattus norvegicus//** | PHYSICAL | 6,876 | 5,816 | 3,852 | 1,107 | | + | | **//Rattus norvegicus//** | PHYSICAL | 6,949 | 5,865 | 3,870 | 1,126 | |
| | ::: | GENETIC | 19 | 19 | 31 | 12 | | | ::: | GENETIC | 19 | 19 | 31 | 12 | | ||
| - | | ::: | COMBINED | 6,895 | 5,826 | 3,862 | 1,110 | | + | | ::: | COMBINED | 6,968 | 5,875 | 3,880 | 1,129 | |
| | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | | **//Ricinus communis//** | PHYSICAL | 5 | 2 | 3 | 2 | | ||
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 5 | 2 | 3 | 2 | | | ::: | COMBINED | 5 | 2 | 3 | 2 | | ||
| - | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 165,268 | 109,953 | 6,900 | 9,172 | | + | | **//Saccharomyces cerevisiae (S288c)//** | PHYSICAL | 167,453 | 111,458 | 6,902 | 9,231 | |
| - | | ::: | GENETIC | 573,170 | 439,375 | 5,957 | 8,946 | | + | | ::: | GENETIC | 573,370 | 439,469 | 5,957 | 8,984 | |
| - | | ::: | COMBINED | 738,438 | 536,456 | 7,159 | 15,248 | | + | | ::: | COMBINED | 740,823 | 537,912 | 7,161 | 15,326 | |
| - | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 13,136 | 9,575 | 2,987 | 1,339 | | + | | **//Schizosaccharomyces pombe (972h)//** | PHYSICAL | 13,927 | 10,074 | 3,080 | 1,456 | |
| - | | ::: | GENETIC | 59,070 | 50,037 | 3,376 | 1,556 | | + | | ::: | GENETIC | 60,108 | 50,669 | 3,429 | 1,787 | |
| - | | ::: | COMBINED | 72,206 | 58,755 | 4,321 | 2,302 | | + | | ::: | COMBINED | 74,035 | 59,796 | 4,373 | 2,564 | |
| | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | | **//Selaginella moellendorffii//** | PHYSICAL | 8 | 6 | 5 | 1 | | ||
| | ::: | GENETIC | 2 | 2 | 3 | 1 | | | ::: | GENETIC | 2 | 2 | 3 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 34 | 16 | 19 | 16 | | | ::: | COMBINED | 34 | 16 | 19 | 16 | | ||
| - | | **//Simian Virus 40//** | PHYSICAL | 9 | 5 | 6 | 5 | | + | | **//Simian Virus 40//** | PHYSICAL | 10 | 5 | 6 | 6 | |
| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| - | | ::: | COMBINED | 9 | 5 | 6 | 5 | | + | | ::: | COMBINED | 10 | 5 | 6 | 6 | |
| | **//Solanum lycopersicum//** | PHYSICAL | 137 | 107 | 44 | 8 | | | **//Solanum lycopersicum//** | PHYSICAL | 137 | 107 | 44 | 8 | | ||
| | ::: | GENETIC | 4 | 4 | 4 | 1 | | | ::: | GENETIC | 4 | 4 | 4 | 1 | | ||
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| | ::: | GENETIC | 0 | 0 | 0 | 0 | | | ::: | GENETIC | 0 | 0 | 0 | 0 | | ||
| | ::: | COMBINED | 18 | 13 | 21 | 9 | | | ::: | COMBINED | 18 | 13 | 21 | 9 | | ||
| - | | **//All Organisms//** | PHYSICAL | 824,395 | 618,467 | 65,600 | 46,913 | | + | | **//All Organisms//** | PHYSICAL | 836,570 | 627,790 | 65,925 | 47,499 | |
| - | | ::: | GENETIC | 826,212 | 677,160 | 20,289 | 15,522 | | + | | ::: | GENETIC | 827,456 | 677,892 | 20,346 | 15,793 | |
| - | | ::: | COMBINED | 1,650,607 | 1,279,126 | 70,567 | 57,653 | | + | | ::: | COMBINED | 1,664,026 | 1,288,948 | 70,842 | 58,405 | |
| ===== Chemical Interaction Statistics ===== | ===== Chemical Interaction Statistics ===== | ||
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| **Note:** Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions. | **Note:** Individual organism counts listed above may total to more than the values in ALL Organisms due to some interactions being counted multiple times due to cross species interactions. | ||
| ====== Previous Build Statistics ====== | ====== Previous Build Statistics ====== | ||
| + | ==== 2019 Updates ==== | ||
| + | * **[[Build 3.5.169]]** | ||
| + | * **[[Build 3.5.168]]** | ||
| + | |||
| ==== 2018 Updates ==== | ==== 2018 Updates ==== | ||
| * **[[Build 3.5.167]]** | * **[[Build 3.5.167]]** | ||