Differences

This shows you the differences between two versions of the page.

Link to this comparison view

orcs:controlled_vocabulary3 [2019/10/02 10:52]
jenn created
orcs:controlled_vocabulary3 [2019/10/02 11:59] (current)
jenn [CRISPR Library Names and Stats]
Line 16: Line 16:
 ^ GECKO                  |18,080| ^ GECKO                  |18,080|
 ^ GECKO v2               ​|19,​050|AG cat #:​1000000048,​ 1000000049| ^ GECKO v2               ​|19,​050|AG cat #:​1000000048,​ 1000000049|
-^ SAM v1 (Zeomycin) ​     |23,430|AG cat #:​1000000057 +^ SAM v1 (Zeomycin) ​     |23,430|AG cat #:​1000000057| 
-^ SAM v1 (Puromycin) ​    ​|23,​430|AG cat #:​1000000075 +^ SAM v1 (Puromycin) ​    ​|23,​430|AG cat #:​1000000075| 
-^ SAM v2 (bleomycin) ​    ​|23,​430|AG cat #:​1000000078 +^ SAM v2 (bleomycin) ​    ​|23,​430|AG cat #:​1000000078| 
-^ CRISPRi-v2 (inhibition)|18,​905|AG cat #:83969, 1000000090 +^ CRISPRi-v2 (inhibition)|18,​905|AG cat #:83969, 1000000090| 
-^ CRISPRa-v2 (activation)|18,​915|+^ CRISPRa-v2 (activation)|18,​915|AG cat #:83978, 1000000091|
 ^ Avana                  |18,675| ^ Avana                  |18,675|
-^ Brunello ​              ​|19,​114|+^ Brunello ​              ​|19,​114|AG cat #:73179, 73178|
 ^ hCRISPRi-v2 ​           |18,905| ^ hCRISPRi-v2 ​           |18,905|
 ^ hCRISPRa-v2 ​           |23,430| ^ hCRISPRa-v2 ​           |23,430|
-^ TKO (Toronto Knockout) v1|17,​661|AG cat #:​1000000069 +^ TKO (Toronto Knockout) v1|17,​661|AG cat #:​1000000069| 
-^ Toronto Knockout version 3 (TKOv3)|18,​053|+^ Toronto Knockout version 3 (TKOv3)|18,​053|AG cat #:90294|
 ^ Edit-R crRNA Cell Cycle Regulation library|169| ^ Edit-R crRNA Cell Cycle Regulation library|169|
 ^ Extended Knockout Library (EKO))|19,​084| ^ Extended Knockout Library (EKO))|19,​084|
-^ Human Improved Genome-wide Knockout CRISPR Library|18,​010|+^ Human Improved Genome-wide Knockout CRISPR Library|18,​010|AG cat #:67989|
 ^ H1/H2 library (Liu Human CRISPR Knockout Library)|18,​436| ^ H1/H2 library (Liu Human CRISPR Knockout Library)|18,​436|
-^ Perturb-seq Guide Barcodes (GBC)|NA| +^ Perturb-seq Guide Barcodes (GBC)|NA|AG cat #:85968
-CRISPRn ​(Wang, 2014)|7,​114| +Human CRISPR Knockout Pooled Libraries (Enriched Sub-pools)/(Wang, 2014)|7,​114|AG cat #:​51043-51048 
-^ CRISPRi (Gilbert,​2014)|15,​976| +^ CRISPRi (Weissman, 2014)|15,​976|AG cat #:62217
-^ CRISPRa (Gilbert, 2014)|15,​977| +^ CRISPRa (Weissman, 2014)|15,​977|AG cat #:60956
-^ Human Activity-Optimized CRISPR Knockout Library/​CRISPRn (Wang, 2015)|18,​166|+^ Human Activity-Optimized CRISPR Knockout Library/​CRISPRn (Wang, 2015)|18,​166|AG cat #:​1000000100|
 ^ CRISPRn (Deans, 2016)|18,​509| ^ CRISPRn (Deans, 2016)|18,​509|
 ^ CRISPRn (DeJesus, 2016)|17,​974| ^ CRISPRn (DeJesus, 2016)|17,​974|
 ^ CRISPRn Minipool (Goodwin, 2017)|1,​120| ^ CRISPRn Minipool (Goodwin, 2017)|1,​120|
-^ Bassik Human CRISPR Knockout Library|20,​533|+^ Bassik Human CRISPR Knockout Library|20,​533|AG cat #:101926 — 101934|
 ^ CRISPRn (Wang, 2017)|18,​663| ^ CRISPRn (Wang, 2017)|18,​663|
 ^ CRISPRn (Riba, 2017)|18,​671| ^ CRISPRn (Riba, 2017)|18,​671|
 ^ CRISPRn (Potting, 2018)|18,​703| ^ CRISPRn (Potting, 2018)|18,​703|
 ^ CRISPRn Targeted Library (Manguso, 2017)|2,​368| ^ CRISPRn Targeted Library (Manguso, 2017)|2,​368|
-^ CRISPRn Targeted Library (Liao, 2018)|| +^ CRISPRn Targeted Library (Liao, 2018)|Unknown
-CRISPRn Targeted ​Kinase Domain Library ​(Tarumoto, 2018)|482|+Human Kinase Domain-Focused CRISPR Knockout ​Library|482|AG cat #:117725
 ^ CRISPRn Targeted Transcription Factor Domain Library (Tarumoto, 2018)|1,​427| ^ CRISPRn Targeted Transcription Factor Domain Library (Tarumoto, 2018)|1,​427|
-^           ​Mouse ​           ^      ^ +^ Focused Ras Synthetic Lethal Human CRISPR Knockout Library|132|AG cat #:92352| 
-^ GECKO v2 (mouse) ​               |20,611| +^ Mini-human|Unspecified|AG cat #:130630| 
-^ Mouse improved genome-wide library v2               ​|18,​424| +^ Human CRISPR Library v.1.1|Unspecified| 
-CRISPRn mouse (Morgens, 2017)      ​|22,414| +^           ​Mouse ​           ^      ​^
-^ Murine lentiviral gRNA library (version 2)     ​|18,​424| +^ GECKO v2 (mouse) ​               |20,611|AG cat #:​1000000052,​1000000053
-Genome-wide Murine ​Library ​(Wang, 2017)    ​|18,​987| +^ Mouse improved genome-wide library v2               ​|18,​424|AG cat #:67988
-^ Murine lentiviral gRNA library (version 1)|19,​149| +Bassik Mouse CRISPR Knockout Library ​    |22,414|AG cat #:​1000000121 — 1000000130
-^ Brie (mouse)|19,​674|+^ Murine lentiviral gRNA library (version 2)     ​|18,​424|AG cat #:67988
 +Mouse Two Plasmid Activity-Optimized CRISPR Knockout ​Library ​   |18,987|AG cat #:​1000000096
 +^ Murine lentiviral gRNA library (version 1)|19,149|AG cat #:50947
 +^ Brie (mouse)|19,​674|AG cat #:73632, 73633|
 ^ Asagio (mouse) ​                ​|20,​077| ^ Asagio (mouse) ​                ​|20,​077|
-^           ​Fly ​           ^      ^ +^           ​Fly ​           ^      ​^
-^ Oxford Fly|13,501|+^ Oxford Fly|13,501|AG cat #:64750|
 ^ CRISPRn (Viswanatha,​ 2018) )|13,651| ^ CRISPRn (Viswanatha,​ 2018) )|13,651|
  
  
 [[:​orcs:​curation_guide|Back to ORCS Curation Guide]] [[:​orcs:​curation_guide|Back to ORCS Curation Guide]]
 
orcs/controlled_vocabulary3.txt · Last modified: 2019/10/02 11:59 by jenn