CRISPR Library Types and Names
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orcs:controlled_vocabulary3 [2019/10/02 10:52] jenn created |
orcs:controlled_vocabulary3 [2019/10/02 11:59] jenn [CRISPR Library Names and Stats] |
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^ GECKO |18,080| | ^ GECKO |18,080| | ||
^ GECKO v2 |19,050|AG cat #:1000000048, 1000000049| | ^ GECKO v2 |19,050|AG cat #:1000000048, 1000000049| | ||
- | ^ SAM v1 (Zeomycin) |23,430|AG cat #:1000000057 | + | ^ SAM v1 (Zeomycin) |23,430|AG cat #:1000000057| |
- | ^ SAM v1 (Puromycin) |23,430|AG cat #:1000000075 | + | ^ SAM v1 (Puromycin) |23,430|AG cat #:1000000075| |
- | ^ SAM v2 (bleomycin) |23,430|AG cat #:1000000078 | + | ^ SAM v2 (bleomycin) |23,430|AG cat #:1000000078| |
- | ^ CRISPRi-v2 (inhibition)|18,905|AG cat #:83969, 1000000090 | + | ^ CRISPRi-v2 (inhibition)|18,905|AG cat #:83969, 1000000090| |
- | ^ CRISPRa-v2 (activation)|18,915| | + | ^ CRISPRa-v2 (activation)|18,915|AG cat #:83978, 1000000091| |
^ Avana |18,675| | ^ Avana |18,675| | ||
- | ^ Brunello |19,114| | + | ^ Brunello |19,114|AG cat #:73179, 73178| |
^ hCRISPRi-v2 |18,905| | ^ hCRISPRi-v2 |18,905| | ||
^ hCRISPRa-v2 |23,430| | ^ hCRISPRa-v2 |23,430| | ||
- | ^ TKO (Toronto Knockout) v1|17,661|AG cat #:1000000069 | + | ^ TKO (Toronto Knockout) v1|17,661|AG cat #:1000000069| |
- | ^ Toronto Knockout version 3 (TKOv3)|18,053| | + | ^ Toronto Knockout version 3 (TKOv3)|18,053|AG cat #:90294| |
^ Edit-R crRNA Cell Cycle Regulation library|169| | ^ Edit-R crRNA Cell Cycle Regulation library|169| | ||
^ Extended Knockout Library (EKO))|19,084| | ^ Extended Knockout Library (EKO))|19,084| | ||
- | ^ Human Improved Genome-wide Knockout CRISPR Library|18,010| | + | ^ Human Improved Genome-wide Knockout CRISPR Library|18,010|AG cat #:67989| |
^ H1/H2 library (Liu Human CRISPR Knockout Library)|18,436| | ^ H1/H2 library (Liu Human CRISPR Knockout Library)|18,436| | ||
- | ^ Perturb-seq Guide Barcodes (GBC)|NA| | + | ^ Perturb-seq Guide Barcodes (GBC)|NA|AG cat #:85968| |
- | ^ CRISPRn (Wang, 2014)|7,114| | + | ^ Human CRISPR Knockout Pooled Libraries (Enriched Sub-pools)/(Wang, 2014)|7,114|AG cat #:51043-51048 |
- | ^ CRISPRi (Gilbert,2014)|15,976| | + | ^ CRISPRi (Weissman, 2014)|15,976|AG cat #:62217| |
- | ^ CRISPRa (Gilbert, 2014)|15,977| | + | ^ CRISPRa (Weissman, 2014)|15,977|AG cat #:60956| |
- | ^ Human Activity-Optimized CRISPR Knockout Library/CRISPRn (Wang, 2015)|18,166| | + | ^ Human Activity-Optimized CRISPR Knockout Library/CRISPRn (Wang, 2015)|18,166|AG cat #:1000000100| |
^ CRISPRn (Deans, 2016)|18,509| | ^ CRISPRn (Deans, 2016)|18,509| | ||
^ CRISPRn (DeJesus, 2016)|17,974| | ^ CRISPRn (DeJesus, 2016)|17,974| | ||
^ CRISPRn Minipool (Goodwin, 2017)|1,120| | ^ CRISPRn Minipool (Goodwin, 2017)|1,120| | ||
- | ^ Bassik Human CRISPR Knockout Library|20,533| | + | ^ Bassik Human CRISPR Knockout Library|20,533|AG cat #:101926 — 101934| |
^ CRISPRn (Wang, 2017)|18,663| | ^ CRISPRn (Wang, 2017)|18,663| | ||
^ CRISPRn (Riba, 2017)|18,671| | ^ CRISPRn (Riba, 2017)|18,671| | ||
^ CRISPRn (Potting, 2018)|18,703| | ^ CRISPRn (Potting, 2018)|18,703| | ||
^ CRISPRn Targeted Library (Manguso, 2017)|2,368| | ^ CRISPRn Targeted Library (Manguso, 2017)|2,368| | ||
- | ^ CRISPRn Targeted Library (Liao, 2018)|| | + | ^ CRISPRn Targeted Library (Liao, 2018)|Unknown| |
- | ^ CRISPRn Targeted Kinase Domain Library (Tarumoto, 2018)|482| | + | ^ Human Kinase Domain-Focused CRISPR Knockout Library|482|AG cat #:117725 |
^ CRISPRn Targeted Transcription Factor Domain Library (Tarumoto, 2018)|1,427| | ^ CRISPRn Targeted Transcription Factor Domain Library (Tarumoto, 2018)|1,427| | ||
- | ^ Mouse ^ ^ | + | ^ Focused Ras Synthetic Lethal Human CRISPR Knockout Library|132|AG cat #:92352| |
- | ^ GECKO v2 (mouse) |20,611| | + | ^ Mini-human|Unspecified|AG cat #:130630| |
- | ^ Mouse improved genome-wide library v2 |18,424| | + | ^ Human CRISPR Library v.1.1|Unspecified| |
- | ^ CRISPRn mouse (Morgens, 2017) |22,414| | + | ^ Mouse ^ ^^ |
- | ^ Murine lentiviral gRNA library (version 2) |18,424| | + | ^ GECKO v2 (mouse) |20,611|AG cat #:1000000052,1000000053| |
- | ^ Genome-wide Murine Library (Wang, 2017) |18,987| | + | ^ Mouse improved genome-wide library v2 |18,424|AG cat #:67988| |
- | ^ Murine lentiviral gRNA library (version 1)|19,149| | + | ^ Bassik Mouse CRISPR Knockout Library |22,414|AG cat #:1000000121 — 1000000130| |
- | ^ Brie (mouse)|19,674| | + | ^ Murine lentiviral gRNA library (version 2) |18,424|AG cat #:67988| |
+ | ^ Mouse Two Plasmid Activity-Optimized CRISPR Knockout Library |18,987|AG cat #:1000000096| | ||
+ | ^ Murine lentiviral gRNA library (version 1)|19,149|AG cat #:50947| | ||
+ | ^ Brie (mouse)|19,674|AG cat #:73632, 73633| | ||
^ Asagio (mouse) |20,077| | ^ Asagio (mouse) |20,077| | ||
- | ^ Fly ^ ^ | + | ^ Fly ^ ^^ |
- | ^ Oxford Fly|13,501| | + | ^ Oxford Fly|13,501|AG cat #:64750| |
^ CRISPRn (Viswanatha, 2018) )|13,651| | ^ CRISPRn (Viswanatha, 2018) )|13,651| | ||
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