BioGRID JSON Formatted Downloads
Differences
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downloads:biogrid_json [2013/09/25 21:03] biogridadmin |
downloads:biogrid_json [2015/04/25 23:49] biogridadmin [Entry Definitions] |
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| - **QUANTITATION**. This will be a positive for negative value recorded by the original publication depicting P-Values, Confidence Score, SGA Score, etc. Will be "-" if no score is reported. | - **QUANTITATION**. This will be a positive for negative value recorded by the original publication depicting P-Values, Confidence Score, SGA Score, etc. Will be "-" if no score is reported. | ||
| - **MODIFICATION**. For any Biochemical Activity experiments, this field will be filled with the associated post translational modification. Will be "-" if no modification is reported. | - **MODIFICATION**. For any Biochemical Activity experiments, this field will be filled with the associated post translational modification. Will be "-" if no modification is reported. | ||
| - | - **PHENOTYPES**. If any phenotype info is recorded, it will be provided here separated by "|". Each phenotype will be of the format <phenotype>[<phenotype qualifier>]:<phenotype type>. Note that the phenotype types and qualifiers are optional and will only be present where recorded. Phenotypes may also have multiple qualifiers in which case unique qualifiers will be separated by carat (^). If no phenotype information is available, this field will contain "-". | + | - **ONTOLOGY_TERMS**. If any ontology terms are recorded, they will be provided here in a separate array. The array is indexed by ontology term ids and contains the relevant annotation to go with each term. |
| - **QUALIFICATIONS**. If additional plain text information was recorded for an interaction, it will be listed with unique qualifiers separated by "|". If no qualification is available, this field will contain "-". | - **QUALIFICATIONS**. If additional plain text information was recorded for an interaction, it will be listed with unique qualifiers separated by "|". If no qualification is available, this field will contain "-". | ||
| - **TAGS**. If an interaction has been tagged with additional classifications, they will be provided in this column separated by "|". If no tag information is available, this field will contain "-". | - **TAGS**. If an interaction has been tagged with additional classifications, they will be provided in this column separated by "|". If no tag information is available, this field will contain "-". | ||