Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision
Previous revision
biogrid_tab_version_2.0 [2015/05/29 21:58]
biogridadmin
biogrid_tab_version_2.0 [2017/08/08 12:52] (current)
Line 59: Line 59:
   - **Quantitative Score**. This will be a positive for negative value recorded by the original publication depicting P-Values, Confidence Score, SGA Score, etc. Will be "​-"​ if no score is reported.   - **Quantitative Score**. This will be a positive for negative value recorded by the original publication depicting P-Values, Confidence Score, SGA Score, etc. Will be "​-"​ if no score is reported.
   - **Post Translational Modification**. For any Biochemical Activity experiments,​ this field will be filled with the associated post translational modification. Will be "​-"​ if no modification is reported.   - **Post Translational Modification**. For any Biochemical Activity experiments,​ this field will be filled with the associated post translational modification. Will be "​-"​ if no modification is reported.
-  - **Ontology ​Terms**. If any ontology term info is recordedit will be provided here separated by "​|"​. ​Each ontology term will be of the format {term class}term:​type[qualifier^qualifier]Note that the type and qualifiers ​are optional and will only be present where recorded. Ontology terms may also have multiple qualifiers ​in which case unique qualifiers ​will be separated by carat (^). If no ontology term information is available, this field will contain ​"​-"​.+  - **Ontology ​Class**. If ontology ​terms are mapped to this complex, the class of those terms will be listed here. If more than one term is mappedeach of their classes ​will be separated by "​|"​. 
 +  - **Ontology Terms**If ontology terms are mapped to this complex, they will be listed here separated by "​|"​. 
 +  - **Ontology ​Qualifiers**. If additional qualifying ontology terms are listed for the ontology ​terms in the previous column, they will be listed here separated by "​|"​. If more than one for a single term is available, they will be separated by a carat (^). If no qualifiers are listed, this field will be "​-"​ with multiple "​-"​ separated by "​|"​ (example: "​-|-|qualifier|-"​) 
 +  - **Ontology Types**. If any ontology types are listed, they will be separated by "​|"​ corresponding to the correct ontology term. No types will be represented by "​-"​.
   - **Qualifications**. If additional plain text information was recorded for an interaction,​ it will be listed with unique qualifiers separated by "​|"​. If no qualification is available, this field will contain "​-"​.   - **Qualifications**. If additional plain text information was recorded for an interaction,​ it will be listed with unique qualifiers separated by "​|"​. If no qualification is available, this field will contain "​-"​.
   - **Tags**. If an interaction has been tagged with additional classifications,​ they will be provided in this column separated by "​|"​. If no tag information is available, this field will contain "​-"​.   - **Tags**. If an interaction has been tagged with additional classifications,​ they will be provided in this column separated by "​|"​. If no tag information is available, this field will contain "​-"​.
 
biogrid_tab_version_2.0.txt · Last modified: 2017/08/08 12:52 (external edit)