http://wiki.thebiogrid.org/ 2012-05-17T06:40:56-04:00 http://wiki.thebiogrid.org/ http://wiki.thebiogrid.org/lib/tpl/biogrid3/images/favicon.ico text/html 2012-04-29T04:33:45-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/statistics?rev=1335688425&do=diff This page shows the latest snapshot of statistics for the BioGRID database. All previous snapshots are archived below separated by year. * Raw Interactions - Each unique combination of interactors A and B, experimental system and publication is counted as a single interaction. Reciprocal interactions (A → B and B → A) are counted twice. * Non-Redundant Interactions - Each unique combination of interactors A and B are counted as a single interaction, regardless of directionality, experime… text/html 2012-04-29T04:32:43-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/build_3.1.88?rev=1335688363&do=diff Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Proteins Unique Publications Arabidopsis thaliana PHYSICAL 15392 12804 5645 1037 GENETIC 185 126 103 60 COMBINED 15577 12912 5684 1086 Bacillus subtilis 168 PHYSICAL 1 1 2 1 GENETIC 0 0 0 0 COMBINED 1 1 2 1 Bos taurus PHYSICAL 136 122 153 56 GENETIC 0 0 0 0 COMBINED 136 … text/html 2012-04-01T03:52:09-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/build_3.1.87?rev=1333266729&do=diff Organism Experiment Type Raw Interactions Non-Redundant Interactions Unique Proteins Unique Publications Arabidopsis thaliana PHYSICAL 15301 12758 5619 1019 GENETIC 185 126 103 60 COMBINED 15486 12866 5659 1068 Bacillus subtilis 168 PHYSICAL 1 1 2 1 GENETIC 0 0 0 0 COMBINED 1 1 2 1 Bos taurus PHYSICAL 136 122 153 56 GENETIC 0 0 0 0 COMBINED 136 … text/html 2012-03-05T18:37:14-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/aboutus?rev=1330990634&do=diff The Biological General Repository for Interaction Datasets (BioGRID) is a public database that archives and disseminates genetic and protein interaction data from model organisms and humans (thebiogrid.org). BioGRID currently holds over 460 000 interactions curated from both high-throughput datasets and individual focused studies, as derived from over 30 000 publications in the primary literature. Complete coverage of the entire literature is maintained for budding yeast (S. cerevisiae), fission… text/html 2012-03-05T18:34:02-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/partners?rev=1330990442&do=diff In order to ensure that BioGRID data is available to as many users as possible, we work with many different partners in building tools, sharing interaction data, and collaborating on common curation goals. The following is a list of some of the different partners who work with us every day. If you're interested in becoming a BioGRID partner, please send us a message at <biogridadmin@gmail.com>. text/html 2012-03-05T18:33:42-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=universityofmontreal.jpg&ns=&rev=1330990422&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/universityofmontreal.jpg?w=125&h=60t=1330990422" alt="universityofmontreal.jpg" /> text/html 2012-03-05T18:21:59-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=xenbase.jpg&ns=&rev=1330989719&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/xenbase.jpg?w=125&h=60t=1330989719" alt="xenbase.jpg" /> text/html 2012-03-05T18:21:59-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=vectorbase.jpg&ns=&rev=1330989719&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/vectorbase.jpg?w=125&h=60t=1330989719" alt="vectorbase.jpg" /> text/html 2012-03-05T18:21:58-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=mirbase.jpg&ns=&rev=1330989718&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/mirbase.jpg?w=125&h=60t=1330989718" alt="mirbase.jpg" /> text/html 2012-03-05T18:21:58-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=maizegdb.jpg&ns=&rev=1330989718&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/maizegdb.jpg?w=125&h=60t=1330989718" alt="maizegdb.jpg" /> text/html 2012-03-05T18:21:58-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=intermine.jpg&ns=&rev=1330989718&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/intermine.jpg?w=125&h=60t=1330989718" alt="intermine.jpg" /> text/html 2012-03-05T18:21:58-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=hgnc.jpg&ns=&rev=1330989718&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/hgnc.jpg?w=125&h=60t=1330989718" alt="hgnc.jpg" /> text/html 2012-03-05T18:21:58-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=ecogene.jpg&ns=&rev=1330989718&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/ecogene.jpg?w=125&h=60t=1330989718" alt="ecogene.jpg" /> text/html 2012-03-05T18:21:58-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=dictybase.jpg&ns=&rev=1330989718&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/dictybase.jpg?w=125&h=60t=1330989718" alt="dictybase.jpg" /> text/html 2012-03-05T18:21:58-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=cgnc.jpg&ns=&rev=1330989718&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/cgnc.jpg?w=125&h=60t=1330989718" alt="cgnc.jpg" /> text/html 2012-03-05T18:21:57-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=bgd.jpg&ns=&rev=1330989717&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/bgd.jpg?w=125&h=60t=1330989717" alt="bgd.jpg" /> text/html 2012-03-05T18:21:57-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=beebase.jpg&ns=&rev=1330989717&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/beebase.jpg?w=125&h=60t=1330989717" alt="beebase.jpg" /> text/html 2012-03-05T18:21:57-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=aphidbase.jpg&ns=&rev=1330989717&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/aphidbase.jpg?w=125&h=60t=1330989717" alt="aphidbase.jpg" /> text/html 2012-03-01T14:12:27-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/biogridrest?rev=1330629147&do=diff Interaction data in BioGRID can be accessed via the BioGRID REST service. Interactions in various formats can be fetched from the BioGRID REST Service over HTTP, programmatically or in a browser, at <http://webservice.thebiogrid.org/resources/interactions/> This URL will retrieve the first 10,000 interactions in BioGRID, ordered by the BioGRID Interaction Id as found in .tab2 files. Single interactions can be retrieved by appending this URL with a Biogrid Interaction ID (e.g. <http://webservice… text/html 2011-01-23T09:14:40-04:00 biogridadmin http://wiki.thebiogrid.org/doku.php/?image=qtip.jpg&ns=&rev=1295792080&tab_details=history&mediado=diff&do=media <img src="/lib/exe/fetch.php/qtip.jpg?w=125&h=60t=1327362501" alt="qtip.jpg" />